RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 JAG1P78504 1218 aa24.59■■□□□ 1.53
RNF38-205ENST00000377877 NTRK3Q16288 839 aa24.59■■□□□ 1.53
RNF38-205ENST00000377877 CERKLQ49MI3 558 aaPredicted RBP24.59■■□□□ 1.53
RNF38-205ENST00000377877 FOXD4L5Q5VV16 416 aaPredicted RBP24.59■■□□□ 1.53
RNF38-205ENST00000377877 CATIPQ7Z7H3 387 aa24.59■■□□□ 1.53
RNF38-205ENST00000377877 FOXD4L4Q8WXT5 416 aaPredicted RBP24.59■■□□□ 1.53
RNF38-205ENST00000377877 TMEM47Q9BQJ4 181 aa24.59■■□□□ 1.53
RNF38-205ENST00000377877 TRIM34Q9BYJ4 488 aa24.59■■□□□ 1.53
RNF38-205ENST00000377877 ANGEL2Q5VTE6 544 aaKnown RBP24.58■■□□□ 1.53
RNF38-205ENST00000377877 MIGA2Q7L4E1 593 aa24.58■■□□□ 1.53
RNF38-205ENST00000377877 TEPSINQ96N21 525 aa24.58■■□□□ 1.53
RNF38-205ENST00000377877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.58■■□□□ 1.53
RNF38-205ENST00000377877 DDX11L8A8MPP1 907 aa24.58■■□□□ 1.52
RNF38-205ENST00000377877 MPHOSPH10O00566 681 aaKnown RBP24.58■■□□□ 1.52
RNF38-205ENST00000377877 DHX16O60231 1041 aaKnown RBP24.58■■□□□ 1.52
RNF38-205ENST00000377877 NOVP48745 357 aa24.58■■□□□ 1.52
RNF38-205ENST00000377877 NUCB2P80303 420 aa24.58■■□□□ 1.52
RNF38-205ENST00000377877 CCDC178Q5BJE1 867 aa24.58■■□□□ 1.52
RNF38-205ENST00000377877 CMTR1Q8N1G2 835 aaKnown RBP24.58■■□□□ 1.52
RNF38-205ENST00000377877 MTMR4Q9NYA4 1195 aa24.58■■□□□ 1.52
RNF38-205ENST00000377877 CPLX1O14810 134 aa24.57■■□□□ 1.52
RNF38-205ENST00000377877 TNNI2P48788 182 aa24.57■■□□□ 1.52
RNF38-205ENST00000377877 CHMP4CQ96CF2 233 aa24.57■■□□□ 1.52
RNF38-205ENST00000377877 CCDC17Q96LX7 622 aa24.57■■□□□ 1.52
RNF38-205ENST00000377877 KAT14Q9H8E8 782 aa24.57■■□□□ 1.52
RNF38-205ENST00000377877 RTN1Q16799 776 aa24.56■■□□□ 1.52
RNF38-205ENST00000377877 LARP1BQ659C4 914 aaKnown RBP24.56■■□□□ 1.52
RNF38-205ENST00000377877 DPY19L2Q6NUT2 758 aa24.56■■□□□ 1.52
RNF38-205ENST00000377877 PNMA1Q8ND90 353 aa24.56■■□□□ 1.52
RNF38-205ENST00000377877 TNPO1Q92973 898 aaKnown RBP24.56■■□□□ 1.52
RNF38-205ENST00000377877 DEFB129Q9H1M3 183 aa24.56■■□□□ 1.52
RNF38-205ENST00000377877 POLR2AP24928 1970 aaKnown RBP24.56■■□□□ 1.52
RNF38-205ENST00000377877 NID2Q14112 1375 aa24.56■■□□□ 1.52
RNF38-205ENST00000377877 PLIN4Q96Q06 1357 aa24.56■■□□□ 1.52
RNF38-205ENST00000377877 GDF11O95390 407 aa24.56■■□□□ 1.52
RNF38-205ENST00000377877 PHKBQ93100 1093 aa24.56■■□□□ 1.52
RNF38-205ENST00000377877 HERC5Q9UII4 1024 aaKnown RBP24.56■■□□□ 1.52
RNF38-205ENST00000377877 BRD1O95696 1058 aa24.55■■□□□ 1.52
RNF38-205ENST00000377877 RCAN1P53805 252 aa24.55■■□□□ 1.52
RNF38-205ENST00000377877 CCDC82Q8N4S0 544 aa24.55■■□□□ 1.52
RNF38-205ENST00000377877 STX6O43752 255 aa24.54■■□□□ 1.52
RNF38-205ENST00000377877 LMOD1P29536 600 aaPredicted RBP24.54■■□□□ 1.52
RNF38-205ENST00000377877 GUCY1A2P33402 732 aa24.54■■□□□ 1.52
RNF38-205ENST00000377877 TNFAIP1Q13829 316 aa24.54■■□□□ 1.52
RNF38-205ENST00000377877 PRAMEF18Q5VWM3 479 aa24.54■■□□□ 1.52
RNF38-205ENST00000377877 ADARB2Q9NS39 739 aaKnown RBP24.54■■□□□ 1.52
RNF38-205ENST00000377877 UBE2Q2LH0YL09 131 aa24.54■■□□□ 1.52
RNF38-205ENST00000377877 DDAH1O94760 285 aa24.54■■□□□ 1.52
RNF38-205ENST00000377877 GGA3Q9NZ52 723 aa24.54■■□□□ 1.52
RNF38-205ENST00000377877 CLIP2Q9UDT6 1046 aa24.54■■□□□ 1.52
RNF38-205ENST00000377877 TAOK2Q9UL54 1235 aa24.54■■□□□ 1.52
RNF38-205ENST00000377877 MTMR7Q9Y216 660 aa24.54■■□□□ 1.52
RNF38-205ENST00000377877 GREB1LQ9C091 1923 aaPredicted RBP24.53■■□□□ 1.52
RNF38-205ENST00000377877 TBC1D12O60347 775 aa24.53■■□□□ 1.52
RNF38-205ENST00000377877 HMGN5P82970 282 aaKnown RBP24.53■■□□□ 1.52
RNF38-205ENST00000377877 MAP3K10Q02779 954 aa24.53■■□□□ 1.52
RNF38-205ENST00000377877 SEPT2Q15019 361 aa24.53■■□□□ 1.52
RNF38-205ENST00000377877 RASGRP2Q7LDG7 609 aa24.53■■□□□ 1.52
RNF38-205ENST00000377877 ORC3Q9UBD5 711 aaPredicted RBP24.53■■□□□ 1.52
RNF38-205ENST00000377877 TOP1P11387 765 aaKnown RBP24.53■■□□□ 1.52
RNF38-205ENST00000377877 ABCB5Q2M3G0 1257 aa24.53■■□□□ 1.52
RNF38-205ENST00000377877 NBPF12Q5TAG4 269 aaPredicted RBP24.53■■□□□ 1.52
RNF38-205ENST00000377877 SIAH1Q8IUQ4 282 aa24.53■■□□□ 1.52
RNF38-205ENST00000377877 FAM184AQ8NB25 1140 aa24.53■■□□□ 1.52
RNF38-205ENST00000377877 MTMR6Q9Y217 621 aa24.53■■□□□ 1.52
RNF38-205ENST00000377877 GLTPD2A6NH11 291 aa24.52■■□□□ 1.52
RNF38-205ENST00000377877 PLEKHA8P1O95397 391 aa24.52■■□□□ 1.52
RNF38-205ENST00000377877 CALM1P0DP23 149 aa24.52■■□□□ 1.52
RNF38-205ENST00000377877 CALM2P0DP24 149 aa24.52■■□□□ 1.52
RNF38-205ENST00000377877 CALM3P0DP25 149 aa24.52■■□□□ 1.52
RNF38-205ENST00000377877 IFNAR1P17181 557 aa24.52■■□□□ 1.52
RNF38-205ENST00000377877 FOSBP53539 338 aa24.52■■□□□ 1.52
RNF38-205ENST00000377877 NBPF11Q86T75 865 aa24.52■■□□□ 1.52
RNF38-205ENST00000377877 L3MBTL3Q96JM7 780 aaPredicted RBP24.52■■□□□ 1.52
RNF38-205ENST00000377877 BAZ2BQ9UIF8 2168 aaKnown RBP24.52■■□□□ 1.52
RNF38-205ENST00000377877 GH2P01242 217 aa24.51■■□□□ 1.51
RNF38-205ENST00000377877 CHAMP1Q96JM3 812 aa24.51■■□□□ 1.51
RNF38-205ENST00000377877 CCDC196A0A1B0GTZ2 297 aa24.51■■□□□ 1.51
RNF38-205ENST00000377877 TTLL1O95922 423 aa24.51■■□□□ 1.51
RNF38-205ENST00000377877 FUT2Q10981 343 aa24.51■■□□□ 1.51
RNF38-205ENST00000377877 LRRC47Q8N1G4 583 aaKnown RBP24.51■■□□□ 1.51
RNF38-205ENST00000377877 FAM43AQ8N2R8 423 aa24.51■■□□□ 1.51
RNF38-205ENST00000377877 STAG2Q8N3U4 1231 aa24.51■■□□□ 1.51
RNF38-205ENST00000377877 AIFM3Q96NN9 605 aa24.51■■□□□ 1.51
RNF38-205ENST00000377877 TRAK2O60296 914 aa24.5■■□□□ 1.51
RNF38-205ENST00000377877 ATP2B2Q01814 1243 aa24.5■■□□□ 1.51
RNF38-205ENST00000377877 PPP2R5BQ15173 497 aa24.5■■□□□ 1.51
RNF38-205ENST00000377877 CPLX2Q6PUV4 134 aaKnown RBP24.5■■□□□ 1.51
RNF38-205ENST00000377877 DLK2Q6UY11 383 aa24.5■■□□□ 1.51
RNF38-205ENST00000377877 SLC26A6Q9BXS9 759 aa24.5■■□□□ 1.51
RNF38-205ENST00000377877 GJB4Q9NTQ9 266 aa24.5■■□□□ 1.51
RNF38-205ENST00000377877 WDR33Q9C0J8 1336 aaKnown RBP24.49■■□□□ 1.51
RNF38-205ENST00000377877 VPS37CA5D8V6 355 aaPredicted RBP24.49■■□□□ 1.51
RNF38-205ENST00000377877 GOLGA6L3A6NEY3 463 aa24.49■■□□□ 1.51
RNF38-205ENST00000377877 ZSCAN22P10073 491 aaPredicted RBP24.49■■□□□ 1.51
RNF38-205ENST00000377877 PDCP20941 246 aa24.49■■□□□ 1.51
RNF38-205ENST00000377877 TMEM179Q6ZVK1 233 aa24.49■■□□□ 1.51
RNF38-205ENST00000377877 APOBEC3FQ8IUX4 373 aaKnown RBP24.49■■□□□ 1.51
RNF38-205ENST00000377877 SRBD1Q8N5C6 995 aaKnown RBP24.49■■□□□ 1.51
RNF38-205ENST00000377877 CTCFLQ8NI51 663 aaPredicted RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms