RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 C11orf57Q6ZUT1 292 aaPredicted RBP16.81■□□□□ 0.28
UBA1-202ENST00000377269 PAXIP1Q6ZW49 1069 aaPredicted RBP16.81■□□□□ 0.28
UBA1-202ENST00000377269 NECAB1Q8N987 351 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 TFIP11Q9UBB9 837 aaKnown RBP16.81■□□□□ 0.28
UBA1-202ENST00000377269 ORC3Q9UBD5 711 aaPredicted RBP16.81■□□□□ 0.28
UBA1-202ENST00000377269 SUGT1Q9Y2Z0 365 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 GAKO14976 1311 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 E7EWF7 191 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 ZNF213O14771 459 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 LDHCP07864 332 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 CTDSPL2Q05D32 466 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 CERS3Q8IU89 383 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 TBC1D10CQ8IV04 446 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 JDP2Q8WYK2 163 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 SMARCE1Q969G3 411 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 PPP1R13BQ96KQ4 1090 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 IMPACTQ9P2X3 320 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 TACC3Q9Y6A5 838 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 MYO1CO00159 1063 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 POLR3GO15318 223 aaPredicted RBP16.8■□□□□ 0.28
UBA1-202ENST00000377269 CHRM1P11229 460 aaPredicted RBP16.8■□□□□ 0.28
UBA1-202ENST00000377269 STX1AQ16623 288 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 FAM163AQ96GL9 167 aaPredicted RBP16.8■□□□□ 0.28
UBA1-202ENST00000377269 VPS33BQ9H267 617 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 DCP1AQ9NPI6 582 aaPredicted RBP16.8■□□□□ 0.28
UBA1-202ENST00000377269 TPCN1Q9ULQ1 816 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 FER1L6Q2WGJ9 1857 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 BAG3O95817 575 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 RHBDL3P58872 404 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 PPP4CP60510 307 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 ALX1Q15699 326 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 ZSCAN26Q16670 478 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 TEX2Q8IWB9 1127 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 BICD2Q8TD16 824 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 TGFBRAP1Q8WUH2 860 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 CRNKL1Q9BZJ0 848 aaKnown RBP16.8■□□□□ 0.28
UBA1-202ENST00000377269 NACAP1Q9BZK3 213 aa16.8■□□□□ 0.28
UBA1-202ENST00000377269 MINDY4BA8MYZ0 360 aa16.79■□□□□ 0.28
UBA1-202ENST00000377269 CTAGE5O15320 804 aa16.79■□□□□ 0.28
UBA1-202ENST00000377269 DHX16O60231 1041 aaKnown RBP16.79■□□□□ 0.28
UBA1-202ENST00000377269 VIL1P09327 827 aaKnown RBP16.79■□□□□ 0.28
UBA1-202ENST00000377269 CASQ1P31415 396 aa16.79■□□□□ 0.28
UBA1-202ENST00000377269 CRKP46108 304 aa16.79■□□□□ 0.28
UBA1-202ENST00000377269 APOBEC3HQ6NTF7 200 aaKnown RBP16.79■□□□□ 0.28
UBA1-202ENST00000377269 RSBN1LQ6PCB5 846 aaPredicted RBP16.79■□□□□ 0.28
UBA1-202ENST00000377269 CHST3Q7LGC8 479 aa16.79■□□□□ 0.28
UBA1-202ENST00000377269 NEK1Q96PY6 1258 aa16.79■□□□□ 0.28
UBA1-202ENST00000377269 GEMIN8Q9NWZ8 242 aaKnown RBP16.79■□□□□ 0.28
UBA1-202ENST00000377269 RBM5P52756 815 aaKnown RBP eCLIP16.79■□□□□ 0.28
UBA1-202ENST00000377269 DHX40Q8IX18 779 aaKnown RBP16.79■□□□□ 0.28
UBA1-202ENST00000377269 UBXN4Q92575 508 aa16.79■□□□□ 0.28
UBA1-202ENST00000377269 TEKT1Q969V4 418 aa16.79■□□□□ 0.28
UBA1-202ENST00000377269 LRRC2Q9BYS8 371 aa16.79■□□□□ 0.28
UBA1-202ENST00000377269 LTBP3Q9NS15 1303 aa16.78■□□□□ 0.28
UBA1-202ENST00000377269 USP17L12C9JPN9 530 aa16.78■□□□□ 0.28
UBA1-202ENST00000377269 USP17L21D6R901 530 aa16.78■□□□□ 0.28
UBA1-202ENST00000377269 CYP2D6P10635 497 aa16.78■□□□□ 0.28
UBA1-202ENST00000377269 MAPKAPK5Q8IW41 473 aa16.78■□□□□ 0.28
UBA1-202ENST00000377269 GMLQ99445 158 aa16.78■□□□□ 0.28
UBA1-202ENST00000377269 CWC15Q9P013 229 aaKnown RBP16.78■□□□□ 0.28
UBA1-202ENST00000377269 SHTN1A0MZ66 631 aa16.78■□□□□ 0.28
UBA1-202ENST00000377269 USP17L8P0C7I0 530 aa16.78■□□□□ 0.28
UBA1-202ENST00000377269 FKBP1AP62942 108 aaKnown RBP16.78■□□□□ 0.28
UBA1-202ENST00000377269 TMED8Q6PL24 325 aaPredicted RBP16.78■□□□□ 0.28
UBA1-202ENST00000377269 SLF2Q8IX21 1173 aa16.78■□□□□ 0.28
UBA1-202ENST00000377269 PSD3Q9NYI0 1048 aa16.78■□□□□ 0.28
UBA1-202ENST00000377269 MKRN1Q9UHC7 482 aaKnown RBP16.78■□□□□ 0.28
UBA1-202ENST00000377269 MYH2Q9UKX2 1941 aa16.78■□□□□ 0.28
UBA1-202ENST00000377269 CCDC88AQ3V6T2 1871 aa16.78■□□□□ 0.28
UBA1-202ENST00000377269 BECN2A8MW95 431 aa16.77■□□□□ 0.28
UBA1-202ENST00000377269 SOCS7O14512 581 aa16.77■□□□□ 0.28
UBA1-202ENST00000377269 TPM1P09493 284 aa16.77■□□□□ 0.28
UBA1-202ENST00000377269 USP5P45974 858 aa16.77■□□□□ 0.28
UBA1-202ENST00000377269 CACNB3P54284 484 aa16.77■□□□□ 0.28
UBA1-202ENST00000377269 BLOC1S2Q6QNY1 142 aa16.77■□□□□ 0.28
UBA1-202ENST00000377269 NBPF11Q86T75 865 aa16.77■□□□□ 0.28
UBA1-202ENST00000377269 TEX11Q8IYF3 940 aa16.77■□□□□ 0.28
UBA1-202ENST00000377269 SRRTQ9BXP5 876 aaKnown RBP16.77■□□□□ 0.28
UBA1-202ENST00000377269 HHIPL2Q6UWX4 724 aa16.77■□□□□ 0.27
UBA1-202ENST00000377269 FBXO18Q8NFZ0 1043 aa16.77■□□□□ 0.27
UBA1-202ENST00000377269 GOLGA5Q8TBA6 731 aa16.77■□□□□ 0.27
UBA1-202ENST00000377269 MCM9Q9NXL9 1143 aa16.77■□□□□ 0.27
UBA1-202ENST00000377269 SAP30BPQ9UHR5 308 aaKnown RBP16.77■□□□□ 0.27
UBA1-202ENST00000377269 LCMT1Q9UIC8 334 aa16.77■□□□□ 0.27
UBA1-202ENST00000377269 MAST2Q6P0Q8 1798 aa16.77■□□□□ 0.27
UBA1-202ENST00000377269 PHLPP2Q6ZVD8 1323 aa16.77■□□□□ 0.27
UBA1-202ENST00000377269 TRIM66O15016 1216 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 TADA3O75528 432 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 TBC1D8O95759 1140 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 RPS6KB1P23443 525 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 PSMA5P28066 241 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 PPARAQ07869 468 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 KRT32Q14532 448 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 CIAPIN1Q6FI81 312 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 CDC42EP5Q6NZY7 148 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 IQUBQ8NA54 791 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 CCDC150Q8NCX0 1101 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 ATP8A2Q9NTI2 1148 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 USP40Q9NVE5 1235 aa16.76■□□□□ 0.27
UBA1-202ENST00000377269 ZMYM6O95789 1325 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms