RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 SYNRGQ9UMZ2 1314 aa15.06■□□□□ 0
ACTN1-202ENST00000376839 TBC1D8O95759 1140 aa15.06■□□□□ 0
ACTN1-202ENST00000376839 CYP7A1P22680 504 aa15.06■□□□□ 0
ACTN1-202ENST00000376839 RBL2Q08999 1139 aa15.06■□□□□ 0
ACTN1-202ENST00000376839 SYMPKQ92797 1274 aaKnown RBP15.06■□□□□ 0
ACTN1-202ENST00000376839 PAGE5Q96GU1 130 aa15.06■□□□□ 0
ACTN1-202ENST00000376839 RNF26Q9BY78 433 aaPredicted RBP15.06■□□□□ 0
ACTN1-202ENST00000376839 RNF41Q9H4P4 317 aaPredicted RBP15.06■□□□□ 0
ACTN1-202ENST00000376839 MYH6P13533 1939 aa15.06■□□□□ 0
ACTN1-202ENST00000376839 PLEKHA8P1O95397 391 aa15.06■□□□□ 0
ACTN1-202ENST00000376839 IL6STP40189 918 aaPredicted RBP15.06■□□□□ 0
ACTN1-202ENST00000376839 CC2D1AQ6P1N0 951 aaPredicted RBP15.06■□□□□ 0
ACTN1-202ENST00000376839 CCDC12Q8WUD4 166 aaPredicted RBP15.06■□□□□ 0
ACTN1-202ENST00000376839 LZTFL1Q9NQ48 299 aa15.06■□□□□ 0
ACTN1-202ENST00000376839 SLAIN2Q9P270 581 aa15.06■□□□□ 0
ACTN1-202ENST00000376839 CYP2D7A0A087X1C5 515 aa15.05■□□□□ 0
ACTN1-202ENST00000376839 POLR3GO15318 223 aaPredicted RBP15.05■□□□□ 0
ACTN1-202ENST00000376839 COBLO75128 1261 aa15.05■□□□□ 0
ACTN1-202ENST00000376839 TPM1P09493 284 aa15.05■□□□□ 0
ACTN1-202ENST00000376839 RCAN1P53805 252 aa15.05■□□□□ 0
ACTN1-202ENST00000376839 FUT2Q10981 343 aa15.05■□□□□ 0
ACTN1-202ENST00000376839 SPATA1Q5VX52 437 aa15.05■□□□□ 0
ACTN1-202ENST00000376839 SH3RF1Q7Z6J0 888 aa15.05■□□□□ 0
ACTN1-202ENST00000376839 ENAHQ8N8S7 591 aaPredicted RBP15.05■□□□□ 0
ACTN1-202ENST00000376839 IGSF22Q8N9C0 903 aa15.05■□□□□ 0
ACTN1-202ENST00000376839 PHF20Q9BVI0 1012 aa15.05■□□□□ 0
ACTN1-202ENST00000376839 AKAP17AQ02040 695 aaKnown RBP15.05■□□□□ -0
ACTN1-202ENST00000376839 DPYDQ12882 1025 aa15.05■□□□□ -0
ACTN1-202ENST00000376839 GPR161Q8N6U8 529 aaKnown RBP15.05■□□□□ -0
ACTN1-202ENST00000376839 STAMQ92783 540 aa15.05■□□□□ -0
ACTN1-202ENST00000376839 PANX2Q96RD6 677 aa15.05■□□□□ -0
ACTN1-202ENST00000376839 MTA3Q9BTC8 594 aa15.05■□□□□ -0
ACTN1-202ENST00000376839 BTG4Q9NY30 223 aa15.05■□□□□ -0
ACTN1-202ENST00000376839 ADD3Q9UEY8 706 aaKnown RBP15.05■□□□□ -0
ACTN1-202ENST00000376839 CCDC175P0C221 793 aa15.04■□□□□ -0
ACTN1-202ENST00000376839 KRT2P35908 639 aa15.04■□□□□ -0
ACTN1-202ENST00000376839 PBX1P40424 430 aa15.04■□□□□ -0
ACTN1-202ENST00000376839 PARD6BQ9BYG5 372 aa15.04■□□□□ -0
ACTN1-202ENST00000376839 ZSWIM4Q9H7M6 989 aa15.04■□□□□ -0
ACTN1-202ENST00000376839 ABCF2Q9UG63 623 aa15.04■□□□□ -0
ACTN1-202ENST00000376839 ADGRG1Q9Y653 693 aa15.04■□□□□ -0
ACTN1-202ENST00000376839 PLCH1Q4KWH8 1693 aa15.04■□□□□ -0
ACTN1-202ENST00000376839 WTIPA6NIX2 430 aaPredicted RBP15.04■□□□□ -0
ACTN1-202ENST00000376839 CDKAL1Q5VV42 579 aa15.04■□□□□ -0
ACTN1-202ENST00000376839 ESR2Q92731 530 aa15.04■□□□□ -0
ACTN1-202ENST00000376839 V9GY48 417 aaPredicted RBP15.04■□□□□ -0
ACTN1-202ENST00000376839 PPP1R3GB7ZBB8 358 aa15.03■□□□□ -0
ACTN1-202ENST00000376839 CYP2C19P33261 490 aa15.03■□□□□ -0
ACTN1-202ENST00000376839 ZNF174Q15697 407 aa15.03■□□□□ -0
ACTN1-202ENST00000376839 CCDC34Q96HJ3 373 aa15.03■□□□□ -0
ACTN1-202ENST00000376839 UBXN6Q9BZV1 441 aa15.03■□□□□ -0
ACTN1-202ENST00000376839 RTL9Q8NET4 1388 aa15.03■□□□□ -0
ACTN1-202ENST00000376839 MYH2Q9UKX2 1941 aa15.03■□□□□ -0
ACTN1-202ENST00000376839 COL4A1P02462 1669 aa15.03■□□□□ -0
ACTN1-202ENST00000376839 CHRNDQ07001 517 aa15.03■□□□□ -0
ACTN1-202ENST00000376839 PPFIBP1Q86W92 1011 aa15.03■□□□□ -0
ACTN1-202ENST00000376839 AK7Q96M32 723 aa15.03■□□□□ -0
ACTN1-202ENST00000376839 NPY5RQ15761 445 aa15.02■□□□□ -0
ACTN1-202ENST00000376839 RABGGTAQ92696 567 aa15.02■□□□□ -0
ACTN1-202ENST00000376839 GOLGA1Q92805 767 aa15.02■□□□□ -0
ACTN1-202ENST00000376839 ZSCAN10Q96SZ4 725 aaPredicted RBP15.02■□□□□ -0
ACTN1-202ENST00000376839 ZCCHC17Q9NP64 241 aaKnown RBP15.02■□□□□ -0
ACTN1-202ENST00000376839 ANAPC4Q9UJX5 808 aa15.02■□□□□ -0
ACTN1-202ENST00000376839 MAGEB6P1A0A0J9YX57 407 aa15.02■□□□□ -0
ACTN1-202ENST00000376839 MFAP3LO75121 409 aa15.02■□□□□ -0
ACTN1-202ENST00000376839 XBP1P17861 261 aa15.02■□□□□ -0
ACTN1-202ENST00000376839 CASP14P31944 242 aa15.02■□□□□ -0
ACTN1-202ENST00000376839 IGHMBP2P38935 993 aaKnown RBP15.02■□□□□ -0
ACTN1-202ENST00000376839 TAF3Q5VWG9 929 aa15.02■□□□□ -0
ACTN1-202ENST00000376839 CTNND2Q9UQB3 1225 aa15.02■□□□□ -0
ACTN1-202ENST00000376839 PRPF3O43395 683 aaKnown RBP15.02□□□□□ -0.01
ACTN1-202ENST00000376839 GYPCP04921 128 aa15.02□□□□□ -0.01
ACTN1-202ENST00000376839 FXR1P51114 621 aaKnown RBP eCLIP15.02□□□□□ -0.01
ACTN1-202ENST00000376839 EIF5P55010 431 aaKnown RBP15.02□□□□□ -0.01
ACTN1-202ENST00000376839 DYNLL1P63167 89 aaKnown RBP15.02□□□□□ -0.01
ACTN1-202ENST00000376839 EVX2Q03828 476 aa15.02□□□□□ -0.01
ACTN1-202ENST00000376839 CCDC152Q4G0S7 254 aa15.02□□□□□ -0.01
ACTN1-202ENST00000376839 IFIT1BQ5T764 474 aaKnown RBP15.02□□□□□ -0.01
ACTN1-202ENST00000376839 TNFRSF25Q93038 417 aa15.02□□□□□ -0.01
ACTN1-202ENST00000376839 BLZF1Q9H2G9 400 aa15.02□□□□□ -0.01
ACTN1-202ENST00000376839 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.02□□□□□ -0.01
ACTN1-202ENST00000376839 XDHP47989 1333 aa15.01□□□□□ -0.01
ACTN1-202ENST00000376839 CCDC66A2RUB6 948 aa15.01□□□□□ -0.01
ACTN1-202ENST00000376839 ATP8B1O43520 1251 aa15.01□□□□□ -0.01
ACTN1-202ENST00000376839 CCT6AP40227 531 aaKnown RBP15.01□□□□□ -0.01
ACTN1-202ENST00000376839 GYG1P46976 350 aa15.01□□□□□ -0.01
ACTN1-202ENST00000376839 FAM193AP78312 1265 aa15.01□□□□□ -0.01
ACTN1-202ENST00000376839 CREBRFQ8IUR6 639 aa15.01□□□□□ -0.01
ACTN1-202ENST00000376839 GSDMAQ96QA5 445 aa15.01□□□□□ -0.01
ACTN1-202ENST00000376839 RIOK1Q9BRS2 568 aaKnown RBP15.01□□□□□ -0.01
ACTN1-202ENST00000376839 CICQ96RK0 1608 aaPredicted RBP15.01□□□□□ -0.01
ACTN1-202ENST00000376839 BAZ2BQ9UIF8 2168 aaKnown RBP15.01□□□□□ -0.01
ACTN1-202ENST00000376839 COL1A1P02452 1464 aaPredicted RBP15.01□□□□□ -0.01
ACTN1-202ENST00000376839 BCL9LQ86UU0 1499 aa15.01□□□□□ -0.01
ACTN1-202ENST00000376839 TFRCP02786 760 aaKnown RBP15.01□□□□□ -0.01
ACTN1-202ENST00000376839 OAS2P29728 719 aaKnown RBP15.01□□□□□ -0.01
ACTN1-202ENST00000376839 TROAPQ12815 778 aa15.01□□□□□ -0.01
ACTN1-202ENST00000376839 TTC38Q5R3I4 469 aa15.01□□□□□ -0.01
ACTN1-202ENST00000376839 CATIPQ7Z7H3 387 aa15.01□□□□□ -0.01
ACTN1-202ENST00000376839 FERMT2Q96AC1 680 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms