RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 BTDP43251 543 aa12.63□□□□□ -0.39
HDAC6-203ENST00000376619 GRIN1Q05586 938 aa12.63□□□□□ -0.39
HDAC6-203ENST00000376619 DHX37Q8IY37 1157 aaKnown RBP12.63□□□□□ -0.39
HDAC6-203ENST00000376619 MB21D2Q8IYB1 491 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-203ENST00000376619 STK32BQ9NY57 414 aa12.63□□□□□ -0.39
HDAC6-203ENST00000376619 WDHD1O75717 1129 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-203ENST00000376619 EYA3Q99504 573 aa12.63□□□□□ -0.39
HDAC6-203ENST00000376619 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC6-203ENST00000376619 CHMP2AO43633 222 aa12.63□□□□□ -0.39
HDAC6-203ENST00000376619 ZFYVE27Q5T4F4 411 aa12.63□□□□□ -0.39
HDAC6-203ENST00000376619 SLC51AQ86UW1 340 aa12.63□□□□□ -0.39
HDAC6-203ENST00000376619 CAPZA3Q96KX2 299 aa12.63□□□□□ -0.39
HDAC6-203ENST00000376619 GUCA1BQ9UMX6 200 aa12.63□□□□□ -0.39
HDAC6-203ENST00000376619 UBXN1Q04323 297 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 DPP8Q6V1X1 898 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-203ENST00000376619 CACNA2D4Q7Z3S7 1137 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 FAM84BQ96KN1 310 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-203ENST00000376619 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.62□□□□□ -0.39
HDAC6-203ENST00000376619 CENPHQ9H3R5 247 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 EPB41L4AQ9HCS5 686 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-203ENST00000376619 RGS17Q9UGC6 210 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-203ENST00000376619 SAMM50Q9Y512 469 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 KLRF2D3W0D1 207 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 PARP1P09874 1014 aaKnown RBP12.62□□□□□ -0.39
HDAC6-203ENST00000376619 CASQ1P31415 396 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 WDR78Q5VTH9 848 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 SAMSN1Q9NSI8 373 aaKnown RBP12.62□□□□□ -0.39
HDAC6-203ENST00000376619 ARGLU1Q9NWB6 273 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-203ENST00000376619 AP5Z1O43299 807 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 SERPINB2P05120 415 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 TECP42680 631 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 EXOSC10Q01780 885 aaKnown RBP12.62□□□□□ -0.39
HDAC6-203ENST00000376619 SLC39A14Q15043 492 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 TBC1D10BQ4KMP7 808 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-203ENST00000376619 SYMPKQ92797 1274 aaKnown RBP12.62□□□□□ -0.39
HDAC6-203ENST00000376619 TMOD2Q9NZR1 351 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 YEATS4O95619 227 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 GSDMDP57764 484 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 RNASE9P60153 205 aaKnown RBP12.62□□□□□ -0.39
HDAC6-203ENST00000376619 IQUBQ8NA54 791 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 LINC00116Q8NCU8 138 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 COA7Q96BR5 231 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 RTEL1Q9NZ71 1219 aa12.62□□□□□ -0.39
HDAC6-203ENST00000376619 PHACTR2O75167 634 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 HLA-DOAP06340 250 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 CASP7P55210 303 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 CACNB1Q02641 598 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-203ENST00000376619 SH3RF3Q8TEJ3 882 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-203ENST00000376619 CPDO75976 1380 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 MED23Q9ULK4 1368 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 PP2D1A8MPX8 630 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 CALML4Q96GE6 196 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 GDAP1L1Q96MZ0 367 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 USP40Q9NVE5 1235 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 USP27XA6NNY8 438 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 NLRP12P59046 1061 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 R3HDM1Q15032 1099 aaKnown RBP12.61□□□□□ -0.39
HDAC6-203ENST00000376619 ELF2Q15723 593 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 HS1BP3Q53T59 392 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 ENAHQ8N8S7 591 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-203ENST00000376619 IGSF22Q8N9C0 903 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 LY9Q9HBG7 655 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 EXOC1Q9NV70 894 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 KIF20BQ96Q89 1820 aa12.61□□□□□ -0.39
HDAC6-203ENST00000376619 ERVV-1B6SEH8 477 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 SORBS3O60504 671 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 CMA1P23946 247 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 UBXN2AP68543 259 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 CCDC40Q4G0X9 1142 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 TAF3Q5VWG9 929 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 KCTD1Q719H9 257 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 NELFCDQ8IXH7 590 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 GOLGA6L1Q8N7Z2 621 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 RRP36Q96EU6 259 aaKnown RBP12.6□□□□□ -0.39
HDAC6-203ENST00000376619 HOMER2Q9NSB8 354 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 CLRN2A0PK11 232 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 CUTAO60888 179 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 SLURP2P0DP57 97 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 UBE4AQ14139 1066 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 MCM6Q14566 821 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 EZH2Q15910 746 aaKnown RBP12.6□□□□□ -0.39
HDAC6-203ENST00000376619 RASGRP2Q7LDG7 609 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 CPXCR1Q8N123 301 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 NCAPD2Q15021 1401 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 RTL9Q8NET4 1388 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 ITSN1Q15811 1721 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 SMCO2A6NFE2 343 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 TMEM232C9JQI7 657 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 DYNC1I1O14576 645 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 KIF5CO60282 957 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 RHOXF2BP0C7M4 288 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 USP8P40818 1118 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 GSTO1P78417 241 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 KRBA2Q6ZNG9 492 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 ADGRA1Q86SQ6 560 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 CCDC102AQ96A19 550 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 RHOXF2Q9BQY4 288 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 PDCL3Q9H2J4 239 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 BCL2L12Q9HB09 334 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 PARP3Q9Y6F1 533 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms