RNA–Protein interactions for RNA: ENST00000374946.7

TMEM235-201, Transcript of transmembrane protein 235, humanhuman

TSL 5 BASIC

Gene TMEM235, Length 2,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-201ENST00000374946 CT47A1Q5JQC4 288 aaPredicted RBP21.74■■□□□ 1.07
TMEM235-201ENST00000374946 NCAPH2Q6IBW4 605 aa21.74■■□□□ 1.07
TMEM235-201ENST00000374946 WDR93Q6P2C0 686 aa21.74■■□□□ 1.07
TMEM235-201ENST00000374946 FOXP1Q9H334 677 aaPredicted RBP21.74■■□□□ 1.07
TMEM235-201ENST00000374946 IFNAR1P17181 557 aa21.73■■□□□ 1.07
TMEM235-201ENST00000374946 MCAMP43121 646 aa21.73■■□□□ 1.07
TMEM235-201ENST00000374946 AFMP43652 599 aa21.73■■□□□ 1.07
TMEM235-201ENST00000374946 AMPD2Q01433 879 aa21.73■■□□□ 1.07
TMEM235-201ENST00000374946 TTC31Q49AM3 519 aaPredicted RBP21.73■■□□□ 1.07
TMEM235-201ENST00000374946 ICE2Q659A1 982 aa21.73■■□□□ 1.07
TMEM235-201ENST00000374946 TMTC1Q8IUR5 882 aa21.73■■□□□ 1.07
TMEM235-201ENST00000374946 MYO1AQ9UBC5 1043 aa21.73■■□□□ 1.07
TMEM235-201ENST00000374946 MYO6Q9UM54 1294 aa21.73■■□□□ 1.07
TMEM235-201ENST00000374946 WDR17Q8IZU2 1322 aa21.73■■□□□ 1.07
TMEM235-201ENST00000374946 CORO7P57737 925 aa21.72■■□□□ 1.07
TMEM235-201ENST00000374946 CCDC85AQ96PX6 553 aaPredicted RBP21.72■■□□□ 1.07
TMEM235-201ENST00000374946 ZNF335Q9H4Z2 1342 aaPredicted RBP21.72■■□□□ 1.07
TMEM235-201ENST00000374946 CASP1P29466 404 aa21.72■■□□□ 1.07
TMEM235-201ENST00000374946 LIFRP42702 1097 aa21.72■■□□□ 1.07
TMEM235-201ENST00000374946 SMYD4Q8IYR2 804 aaPredicted RBP21.72■■□□□ 1.07
TMEM235-201ENST00000374946 SLAIN2Q9P270 581 aa21.72■■□□□ 1.07
TMEM235-201ENST00000374946 CHD4Q14839 1912 aa21.72■■□□□ 1.07
TMEM235-201ENST00000374946 ITIH6Q6UXX5 1313 aa21.71■■□□□ 1.07
TMEM235-201ENST00000374946 A0A087X0B3 334 aa21.71■■□□□ 1.07
TMEM235-201ENST00000374946 ANKRD65E5RJM6 399 aa21.71■■□□□ 1.07
TMEM235-201ENST00000374946 RNF40O75150 1001 aa21.71■■□□□ 1.07
TMEM235-201ENST00000374946 ZCRB1Q8TBF4 217 aaKnown RBP21.71■■□□□ 1.07
TMEM235-201ENST00000374946 PLEKHA4Q9H4M7 779 aa21.71■■□□□ 1.07
TMEM235-201ENST00000374946 IFIT3O14879 490 aaKnown RBP21.71■■□□□ 1.07
TMEM235-201ENST00000374946 SEMA3EO15041 775 aa21.71■■□□□ 1.07
TMEM235-201ENST00000374946 STRN4Q9NRL3 753 aa21.71■■□□□ 1.07
TMEM235-201ENST00000374946 ABHD10Q9NUJ1 306 aa21.71■■□□□ 1.07
TMEM235-201ENST00000374946 ZSWIM5Q9P217 1185 aa21.71■■□□□ 1.07
TMEM235-201ENST00000374946 RNF225M0QZC1 329 aaPredicted RBP21.7■■□□□ 1.06
TMEM235-201ENST00000374946 SYF2O95926 243 aaKnown RBP21.7■■□□□ 1.06
TMEM235-201ENST00000374946 CCT6AP40227 531 aaKnown RBP21.7■■□□□ 1.06
TMEM235-201ENST00000374946 VIPAS39Q9H9C1 493 aa21.7■■□□□ 1.06
TMEM235-201ENST00000374946 FBXO3Q9UK99 471 aa21.7■■□□□ 1.06
TMEM235-201ENST00000374946 CEP131Q9UPN4 1083 aa21.7■■□□□ 1.06
TMEM235-201ENST00000374946 ATRNO75882 1429 aa21.7■■□□□ 1.06
TMEM235-201ENST00000374946 A1BGP04217 495 aa21.7■■□□□ 1.06
TMEM235-201ENST00000374946 AARSP49588 968 aaKnown RBP eCLIP21.7■■□□□ 1.06
TMEM235-201ENST00000374946 GTF2A1P52655 376 aaPredicted RBP21.7■■□□□ 1.06
TMEM235-201ENST00000374946 IRX3P78415 501 aaPredicted RBP21.7■■□□□ 1.06
TMEM235-201ENST00000374946 TRIM22Q8IYM9 498 aa21.7■■□□□ 1.06
TMEM235-201ENST00000374946 CCDC82Q8N4S0 544 aa21.7■■□□□ 1.06
TMEM235-201ENST00000374946 CCDC148Q8NFR7 591 aa21.7■■□□□ 1.06
TMEM235-201ENST00000374946 SLF1Q9BQI6 1058 aa21.7■■□□□ 1.06
TMEM235-201ENST00000374946 PPP1R3GB7ZBB8 358 aa21.69■■□□□ 1.06
TMEM235-201ENST00000374946 CDC25AP30304 524 aa21.69■■□□□ 1.06
TMEM235-201ENST00000374946 CYP26C1Q6V0L0 522 aa21.69■■□□□ 1.06
TMEM235-201ENST00000374946 OXER1Q8TDS5 423 aa21.69■■□□□ 1.06
TMEM235-201ENST00000374946 AFAP1L1Q8TED9 768 aa21.69■■□□□ 1.06
TMEM235-201ENST00000374946 PAGE5Q96GU1 130 aa21.69■■□□□ 1.06
TMEM235-201ENST00000374946 EPSTI1Q96J88 318 aa21.69■■□□□ 1.06
TMEM235-201ENST00000374946 TBC1D2BQ9UPU7 963 aa21.69■■□□□ 1.06
TMEM235-201ENST00000374946 SOS2Q07890 1332 aaPredicted RBP21.69■■□□□ 1.06
TMEM235-201ENST00000374946 PPFIA4O75335 1185 aa21.69■■□□□ 1.06
TMEM235-201ENST00000374946 IDH1O75874 414 aaKnown RBP21.69■■□□□ 1.06
TMEM235-201ENST00000374946 PRPF6O94906 941 aaKnown RBP21.69■■□□□ 1.06
TMEM235-201ENST00000374946 AKAP17AQ02040 695 aaKnown RBP21.69■■□□□ 1.06
TMEM235-201ENST00000374946 PPM1EQ8WY54 764 aa21.69■■□□□ 1.06
TMEM235-201ENST00000374946 CABP5Q9NP86 173 aa21.69■■□□□ 1.06
TMEM235-201ENST00000374946 COL5A2P05997 1499 aaPredicted RBP21.68■■□□□ 1.06
TMEM235-201ENST00000374946 TAF7LQ5H9L4 462 aa21.68■■□□□ 1.06
TMEM235-201ENST00000374946 SH3RF1Q7Z6J0 888 aa21.68■■□□□ 1.06
TMEM235-201ENST00000374946 PIH1D3Q9NQM4 214 aaKnown RBP21.68■■□□□ 1.06
TMEM235-201ENST00000374946 RNF216Q9NWF9 866 aaPredicted RBP21.68■■□□□ 1.06
TMEM235-201ENST00000374946 JRKLQ9Y4A0 524 aa21.68■■□□□ 1.06
TMEM235-201ENST00000374946 ZNF532Q9HCE3 1301 aa21.68■■□□□ 1.06
TMEM235-201ENST00000374946 COBLO75128 1261 aa21.68■■□□□ 1.06
TMEM235-201ENST00000374946 CMTR1Q8N1G2 835 aaKnown RBP21.68■■□□□ 1.06
TMEM235-201ENST00000374946 CTCFLQ8NI51 663 aaPredicted RBP21.68■■□□□ 1.06
TMEM235-201ENST00000374946 NUP88Q99567 741 aaPredicted RBP21.68■■□□□ 1.06
TMEM235-201ENST00000374946 AATFQ9NY61 560 aaKnown RBP eCLIP21.68■■□□□ 1.06
TMEM235-201ENST00000374946 PCDH11XQ9BZA7 1347 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 PCDH11YQ9BZA8 1340 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 N4BP3O15049 544 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 USP14P54578 494 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 CTDSPL2Q05D32 466 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 DPYDQ12882 1025 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 KRT31Q15323 416 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 UBE3CQ15386 1083 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 GSDMAQ96QA5 445 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 TACC3Q9Y6A5 838 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 LRP6O75581 1613 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 RTN1Q16799 776 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 TRAPPC11Q7Z392 1133 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 TRIM10Q9UDY6 481 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 HPCAL4Q9UM19 191 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 CTNND2Q9UQB3 1225 aa21.67■■□□□ 1.06
TMEM235-201ENST00000374946 GUCA1BQ9UMX6 200 aa21.66■■□□□ 1.06
TMEM235-201ENST00000374946 MYH6P13533 1939 aa21.66■■□□□ 1.06
TMEM235-201ENST00000374946 DEXIO95424 95 aa21.66■■□□□ 1.06
TMEM235-201ENST00000374946 STRBPQ96SI9 672 aaKnown RBP21.66■■□□□ 1.06
TMEM235-201ENST00000374946 VPS16Q9H269 839 aa21.66■■□□□ 1.06
TMEM235-201ENST00000374946 NID2Q14112 1375 aa21.65■■□□□ 1.06
TMEM235-201ENST00000374946 PDE6AP16499 860 aa21.65■■□□□ 1.06
TMEM235-201ENST00000374946 TTF1Q15361 905 aaPredicted RBP21.65■■□□□ 1.06
TMEM235-201ENST00000374946 CRACR2BQ8N4Y2 399 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms