RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 GOLGA6DP0CG33 693 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 HPDP32754 393 aaPredicted RBP13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 MCM7P33993 719 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 SEL1L2Q5TEA6 688 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 VEZTQ9HBM0 779 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 GOLGA6AQ9NYA3 693 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 ANGEL1Q9UNK9 670 aaKnown RBP13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 CYP27B1O15528 508 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 ELF2Q15723 593 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 SUPT20HQ8NEM7 779 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 HAUS7Q99871 368 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 CPSF2Q9P2I0 782 aaKnown RBP13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 CARD6Q9BX69 1037 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 TXNDC16Q9P2K2 825 aa13.72□□□□□ -0.21
NPLOC4-202ENST00000374747 ERVV-1B6SEH8 477 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 NDC80O14777 642 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 FAM13AO94988 1023 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 FAM196AQ6ZSG2 479 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 CCDC24Q8N4L8 307 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 PIGBQ92521 554 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 CLSTN2Q9H4D0 955 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 OSBPL3Q9H4L5 887 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 CIB2O75838 187 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 CCT6AP40227 531 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 ZNF75DP51815 510 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 CYP26C1Q6V0L0 522 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 LMNTD2Q8IXW0 634 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 NDUFB9Q9Y6M9 179 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 C1orf167Q5SNV9 1468 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 BAG6P46379 1132 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 IMPACTQ9P2X3 320 aa13.71□□□□□ -0.21
NPLOC4-202ENST00000374747 PDE6BP35913 854 aa13.71□□□□□ -0.22
NPLOC4-202ENST00000374747 CACNA2D3Q8IZS8 1091 aa13.71□□□□□ -0.22
NPLOC4-202ENST00000374747 SMARCC2Q8TAQ2 1214 aa13.71□□□□□ -0.22
NPLOC4-202ENST00000374747 ATG3Q9NT62 314 aa13.71□□□□□ -0.22
NPLOC4-202ENST00000374747 ATP10DQ9P241 1426 aa13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 PREX1Q8TCU6 1659 aa13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 GNA11P29992 359 aa13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 TNNI2P48788 182 aa13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 LRRC24Q50LG9 513 aa13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 CFAP157Q5JU67 520 aa13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 USPL1Q5W0Q7 1092 aa13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 GPR161Q8N6U8 529 aaKnown RBP13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 MPHOSPH6Q99547 160 aaKnown RBP13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 TPD52P55327 224 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 RPL13P26373 211 aaKnown RBP13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 ARHGAP25P42331 645 aa13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 VWA3BQ502W6 1294 aa13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 ZNF772Q68DY9 489 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-202ENST00000374747 PCK1P35558 622 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 FANCCQ00597 558 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 CEP128Q6ZU80 1094 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 NOC4LQ9BVI4 516 aaKnown RBP13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 GREM2Q9H772 168 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 CTNND2Q9UQB3 1225 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 ACTN4O43707 911 aaKnown RBP13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 TBC1D8BQ0IIM8 1120 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 RAPGEF1Q13905 1077 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 PPP2R5BQ15173 497 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 RILPL1Q5EBL4 403 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 MSANTD4Q8NCY6 345 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 ZKSCAN3Q9BRR0 538 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 PTPRUQ92729 1446 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 IFT20Q8IY31 132 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 AATFQ9NY61 560 aaKnown RBP eCLIP13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 PDE8BO95263 885 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 PARP1P09874 1014 aaKnown RBP13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 CBX8Q9HC52 389 aa13.69□□□□□ -0.22
NPLOC4-202ENST00000374747 RXRAP19793 462 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 CLNS1AP54105 237 aaKnown RBP13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 NEDD9Q14511 834 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 FYB2Q5VWT5 728 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 NLGN1Q8N2Q7 840 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 FEZ2Q9UHY8 353 aaPredicted RBP13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 SPDYE3A6NKU9 549 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 INF2Q27J81 1249 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 UTP14CQ5TAP6 766 aaKnown RBP13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 EDC3Q96F86 508 aaKnown RBP13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 BUB1BO60566 1050 aaPredicted RBP13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 DEXIO95424 95 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 ATP2B4P23634 1241 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 SAP30BPQ9UHR5 308 aaKnown RBP13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 VWA3AA6NCI4 1184 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 GOLGA6BA6NDN3 693 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 ARHGAP6O43182 974 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 CCDC14Q49A88 953 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 RUFY4Q6ZNE9 571 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 CSRNP2Q9H175 543 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 FAM169AQ9Y6X4 670 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 CROCCP2Q86T23 111 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 VPS16Q9H269 839 aa13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.68□□□□□ -0.22
NPLOC4-202ENST00000374747 GBP1P32455 592 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 PPM1FP49593 454 aaPredicted RBP13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 PLCD1P51178 756 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 ANO1Q5XXA6 986 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 SV2BQ7L1I2 683 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 TCHPQ9BT92 498 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 SH2D4AQ9H788 454 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 KCNH3Q9ULD8 1083 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms