RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 PI4KBQ9UBF8 816 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 STK36Q9NRP7 1315 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 MYH6P13533 1939 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 MYH15Q9Y2K3 1946 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 CDKL5O76039 1030 aa18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 PLEKHA8P1O95397 391 aa18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 YBX3P16989 372 aaKnown RBP eCLIP18.29■□□□□ 0.522e-6■■■□□ 19.2
NIPAL3-204ENST00000374399 GUCY1A2P33402 732 aa18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 GMPSP49915 693 aaPredicted RBP18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 CCDC178Q5BJE1 867 aa18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 OTUD7BQ6GQQ9 843 aa18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 CRACR2BQ8N4Y2 399 aaPredicted RBP18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 PGAP2Q9UHJ9 254 aa18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 TCP10L2B9ZVM9 353 aa18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 PPP2R5BQ15173 497 aa18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 SHROOM1Q2M3G4 852 aaPredicted RBP18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 FAM173BQ6P4H8 233 aa18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 PNMA1Q8ND90 353 aa18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 DPF2Q92785 391 aa18.29■□□□□ 0.52
NIPAL3-204ENST00000374399 CALM1P0DP23 149 aa18.28■□□□□ 0.52
NIPAL3-204ENST00000374399 CALM2P0DP24 149 aa18.28■□□□□ 0.52
NIPAL3-204ENST00000374399 CALM3P0DP25 149 aa18.28■□□□□ 0.52
NIPAL3-204ENST00000374399 EIF6P56537 245 aaKnown RBP18.28■□□□□ 0.52
NIPAL3-204ENST00000374399 GUCY1B3Q02153 619 aa18.28■□□□□ 0.52
NIPAL3-204ENST00000374399 FKBP1CQ5VVH2 108 aa18.28■□□□□ 0.52
NIPAL3-204ENST00000374399 TATDN1Q6P1N9 297 aa18.28■□□□□ 0.52
NIPAL3-204ENST00000374399 TMTC3Q6ZXV5 915 aa18.28■□□□□ 0.52
NIPAL3-204ENST00000374399 FBXO18Q8NFZ0 1043 aa18.28■□□□□ 0.52
NIPAL3-204ENST00000374399 SLC26A6Q9BXS9 759 aa18.28■□□□□ 0.52
NIPAL3-204ENST00000374399 KIF3AQ9Y496 699 aa18.28■□□□□ 0.52
NIPAL3-204ENST00000374399 BAZ2BQ9UIF8 2168 aaKnown RBP18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 CCDC196A0A1B0GTZ2 297 aa18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 LMNB1P20700 586 aa18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 DNM1Q05193 864 aaKnown RBP18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 RRP1BQ14684 758 aaKnown RBP18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 CPLX2Q6PUV4 134 aaKnown RBP18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 RASGRP2Q7LDG7 609 aa18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 FOXP4Q8IVH2 680 aaPredicted RBP18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 CDAN1Q8IWY9 1227 aa18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 CCDC82Q8N4S0 544 aa18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 FAM151AQ8WW52 585 aa18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 SHISA4Q96DD7 197 aa18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 KAT14Q9H8E8 782 aa18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 MTMR4Q9NYA4 1195 aa18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 STX8Q9UNK0 236 aa18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 CNPY2Q9Y2B0 182 aa18.27■□□□□ 0.52
NIPAL3-204ENST00000374399 H3BQV1 296 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 MMP14P50281 582 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 SLC35G1Q2M3R5 365 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 IFFO2Q5TF58 517 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 ZSCAN29Q8IWY8 852 aaPredicted RBP18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 SRBD1Q8N5C6 995 aaKnown RBP18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 RGS22Q8NE09 1264 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 C8orf76Q96K31 380 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 MAP3K14Q99558 947 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 ALG1Q9BT22 464 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 RBM28Q9NW13 759 aaKnown RBP18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 GJA3Q9Y6H8 435 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 JAG1P78504 1218 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 SSRP1Q08945 709 aaKnown RBP18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 GRM4Q14833 912 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 PKN1Q16512 942 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 MICALL2Q8IY33 904 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 STAG2Q8N3U4 1231 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 GDPD2Q9HCC8 539 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 TMOD2Q9NZR1 351 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 MAD2L2Q9UI95 211 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 TAOK2Q9UL54 1235 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 MYH4Q9Y623 1939 aa18.26■□□□□ 0.51
NIPAL3-204ENST00000374399 CNTNAP5Q8WYK1 1306 aa18.25■□□□□ 0.51
NIPAL3-204ENST00000374399 TRAK2O60296 914 aa18.25■□□□□ 0.51
NIPAL3-204ENST00000374399 PRPF40AO75400 957 aaKnown RBP18.25■□□□□ 0.51
NIPAL3-204ENST00000374399 SAMD7Q7Z3H4 446 aa18.25■□□□□ 0.51
NIPAL3-204ENST00000374399 TMEM87AQ8NBN3 555 aa18.25■□□□□ 0.51
NIPAL3-204ENST00000374399 RNF26Q9BY78 433 aaPredicted RBP18.25■□□□□ 0.51
NIPAL3-204ENST00000374399 CNOT7Q9UIV1 285 aaKnown RBP18.25■□□□□ 0.51
NIPAL3-204ENST00000374399 ASTN2O75129 1339 aaPredicted RBP18.24■□□□□ 0.51
NIPAL3-204ENST00000374399 TOP1P11387 765 aaKnown RBP18.24■□□□□ 0.51
NIPAL3-204ENST00000374399 FAM83AQ86UY5 434 aa18.24■□□□□ 0.51
NIPAL3-204ENST00000374399 CSRNP1Q96S65 589 aa18.24■□□□□ 0.51
NIPAL3-204ENST00000374399 TMEM39BQ9GZU3 492 aa18.24■□□□□ 0.51
NIPAL3-204ENST00000374399 VEZTQ9HBM0 779 aa18.24■□□□□ 0.51
NIPAL3-204ENST00000374399 KIF28PB7ZC32 967 aa18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 PRPF3O43395 683 aaKnown RBP18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 KRT40Q6A162 431 aa18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 SIAH1Q8IUQ4 282 aa18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 CTCFLQ8NI51 663 aaPredicted RBP18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 CCDC17Q96LX7 622 aa18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 ZSCAN16Q9H4T2 348 aaPredicted RBP18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 SCAF8Q9UPN6 1271 aaKnown RBP18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 ATP6V1DQ9Y5K8 247 aa18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 PALM3A6NDB9 673 aaPredicted RBP18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 GOLGA6L22H0YM25 854 aa18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 DEXIO95424 95 aa18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 CERKLQ49MI3 558 aaPredicted RBP18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 RBM26Q5T8P6 1007 aaKnown RBP18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 USP48Q86UV5 1035 aa18.23■□□□□ 0.51
NIPAL3-204ENST00000374399 hCG_1642624A0A1W2PR95 340 aa18.22■□□□□ 0.51
NIPAL3-204ENST00000374399 TRIM22Q8IYM9 498 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms