RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 PRPF3O43395 683 aaKnown RBP19.54■□□□□ 0.72
PTPN20-203ENST00000374342 NASPP49321 788 aaPredicted RBP19.54■□□□□ 0.72
PTPN20-203ENST00000374342 ANKS1AQ92625 1134 aa19.54■□□□□ 0.72
PTPN20-203ENST00000374342 ZDHHC15Q96MV8 337 aa19.54■□□□□ 0.72
PTPN20-203ENST00000374342 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.54■□□□□ 0.72
PTPN20-203ENST00000374342 NUP62CLQ9H1M0 184 aa19.54■□□□□ 0.72
PTPN20-203ENST00000374342 DACT1Q9NYF0 836 aa19.54■□□□□ 0.72
PTPN20-203ENST00000374342 YDJCA8MPS7 323 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 YEATS4O95619 227 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 KCNA3P22001 575 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 U2AF2P26368 475 aaKnown RBP eCLIP19.53■□□□□ 0.72
PTPN20-203ENST00000374342 KIF5BP33176 963 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 DIS3L2Q8IYB7 885 aaKnown RBP19.53■□□□□ 0.72
PTPN20-203ENST00000374342 RTKN2Q8IZC4 609 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 OSBPL5Q9H0X9 879 aaPredicted RBP19.53■□□□□ 0.72
PTPN20-203ENST00000374342 COL4A5P29400 1685 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 BAZ2BQ9UIF8 2168 aaKnown RBP19.53■□□□□ 0.72
PTPN20-203ENST00000374342 SF3A1Q15459 793 aaKnown RBP19.53■□□□□ 0.72
PTPN20-203ENST00000374342 PKN1Q16512 942 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 GRIPAP1Q4V328 841 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 ANO1Q5XXA6 986 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 CCDC125Q86Z20 511 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 SRBD1Q8N5C6 995 aaKnown RBP19.53■□□□□ 0.72
PTPN20-203ENST00000374342 LINC00301Q8NCQ3 95 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 DDX19AQ9NUU7 478 aaKnown RBP19.53■□□□□ 0.72
PTPN20-203ENST00000374342 VPS54Q9P1Q0 977 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 MTMR7Q9Y216 660 aa19.53■□□□□ 0.72
PTPN20-203ENST00000374342 V9GY48 417 aaPredicted RBP19.53■□□□□ 0.72
PTPN20-203ENST00000374342 NR1I2O75469 434 aa19.52■□□□□ 0.72
PTPN20-203ENST00000374342 XBP1P17861 261 aa19.52■□□□□ 0.72
PTPN20-203ENST00000374342 NFIAQ12857 509 aa19.52■□□□□ 0.72
PTPN20-203ENST00000374342 CCAR1Q8IX12 1150 aaKnown RBP19.52■□□□□ 0.72
PTPN20-203ENST00000374342 NEDD1Q8NHV4 660 aa19.52■□□□□ 0.72
PTPN20-203ENST00000374342 KCNG4Q8TDN1 519 aa19.52■□□□□ 0.72
PTPN20-203ENST00000374342 ATF5Q9Y2D1 282 aaPredicted RBP19.52■□□□□ 0.72
PTPN20-203ENST00000374342 GREB1LQ9C091 1923 aaPredicted RBP19.52■□□□□ 0.71
PTPN20-203ENST00000374342 MYH4Q9Y623 1939 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 BTBD18B2RXH4 712 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 CACNB3P54284 484 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 HDLBPQ00341 1268 aaKnown RBP19.51■□□□□ 0.71
PTPN20-203ENST00000374342 GRM4Q14833 912 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 NOSTRINQ8IVI9 506 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 PSMD1Q99460 953 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 TMEM47Q9BQJ4 181 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 PLIN4Q96Q06 1357 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 SPTLC2O15270 562 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 HLA-DOAP06340 250 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 GABPAQ06546 454 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 CAMK4Q16566 473 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 CCDC73Q6ZRK6 1079 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 SHISA4Q96DD7 197 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 GOLPH3LQ9H4A5 285 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 ZNF277Q9NRM2 450 aaPredicted RBP19.51■□□□□ 0.71
PTPN20-203ENST00000374342 PCDHA7Q9UN72 937 aa19.51■□□□□ 0.71
PTPN20-203ENST00000374342 POLD1P28340 1107 aa19.5■□□□□ 0.71
PTPN20-203ENST00000374342 LARGE2Q8N3Y3 721 aa19.5■□□□□ 0.71
PTPN20-203ENST00000374342 FSIP1Q8NA03 581 aa19.5■□□□□ 0.71
PTPN20-203ENST00000374342 RNF214Q8ND24 703 aa19.5■□□□□ 0.71
PTPN20-203ENST00000374342 PIBF1Q8WXW3 757 aa19.5■□□□□ 0.71
PTPN20-203ENST00000374342 CEP95Q96GE4 821 aa19.5■□□□□ 0.71
PTPN20-203ENST00000374342 TNMDQ9H2S6 317 aa19.5■□□□□ 0.71
PTPN20-203ENST00000374342 FOXP1Q9H334 677 aaPredicted RBP19.5■□□□□ 0.71
PTPN20-203ENST00000374342 CLSTN2Q9H4D0 955 aa19.5■□□□□ 0.71
PTPN20-203ENST00000374342 SERPINB13Q9UIV8 391 aa19.5■□□□□ 0.71
PTPN20-203ENST00000374342 SERPINA10Q9UK55 444 aa19.5■□□□□ 0.71
PTPN20-203ENST00000374342 FER1L6Q2WGJ9 1857 aa19.49■□□□□ 0.71
PTPN20-203ENST00000374342 NR5A1Q13285 461 aa19.49■□□□□ 0.71
PTPN20-203ENST00000374342 MAP3K14Q99558 947 aa19.49■□□□□ 0.71
PTPN20-203ENST00000374342 MRIQ9BWK5 157 aa19.49■□□□□ 0.71
PTPN20-203ENST00000374342 TCP10Q12799 353 aa19.49■□□□□ 0.71
PTPN20-203ENST00000374342 MAP3K11Q16584 847 aa19.49■□□□□ 0.71
PTPN20-203ENST00000374342 STAG2Q8N3U4 1231 aa19.49■□□□□ 0.71
PTPN20-203ENST00000374342 OXER1Q8TDS5 423 aa19.49■□□□□ 0.71
PTPN20-203ENST00000374342 SWAP70Q9UH65 585 aa19.49■□□□□ 0.71
PTPN20-203ENST00000374342 MAD2L2Q9UI95 211 aa19.49■□□□□ 0.71
PTPN20-203ENST00000374342 AKR1B1P15121 316 aa19.48■□□□□ 0.71
PTPN20-203ENST00000374342 RASGRP2Q7LDG7 609 aa19.48■□□□□ 0.71
PTPN20-203ENST00000374342 MRPS27Q92552 414 aaKnown RBP19.48■□□□□ 0.71
PTPN20-203ENST00000374342 PHF20Q9BVI0 1012 aa19.48■□□□□ 0.71
PTPN20-203ENST00000374342 MTFR1LQ9H019 292 aa19.48■□□□□ 0.71
PTPN20-203ENST00000374342 SCG2P13521 617 aa19.47■□□□□ 0.71
PTPN20-203ENST00000374342 KRT2P35908 639 aa19.47■□□□□ 0.71
PTPN20-203ENST00000374342 ZFPM1Q8IX07 1006 aa19.47■□□□□ 0.71
PTPN20-203ENST00000374342 RAD17O75943 681 aa19.47■□□□□ 0.71
PTPN20-203ENST00000374342 TOP1P11387 765 aaKnown RBP19.47■□□□□ 0.71
PTPN20-203ENST00000374342 SHMT1P34896 483 aa19.47■□□□□ 0.71
PTPN20-203ENST00000374342 GNAQP50148 359 aa19.47■□□□□ 0.71
PTPN20-203ENST00000374342 SLC39A14Q15043 492 aa19.47■□□□□ 0.71
PTPN20-203ENST00000374342 SOGA3Q5TF21 947 aa19.47■□□□□ 0.71
PTPN20-203ENST00000374342 ADALQ6DHV7 355 aa19.47■□□□□ 0.71
PTPN20-203ENST00000374342 PIM2Q9P1W9 311 aa19.47■□□□□ 0.71
PTPN20-203ENST00000374342 MYO3BQ8WXR4 1341 aa19.46■□□□□ 0.71
PTPN20-203ENST00000374342 A0A1W2PQ27 194 aa19.46■□□□□ 0.71
PTPN20-203ENST00000374342 A0A1W2PQ64 194 aa19.46■□□□□ 0.71
PTPN20-203ENST00000374342 A0A1W2PQD8 194 aa19.46■□□□□ 0.71
PTPN20-203ENST00000374342 MARCKSP29966 332 aaPredicted RBP19.46■□□□□ 0.71
PTPN20-203ENST00000374342 FAM160A1Q05DH4 1040 aa19.46■□□□□ 0.71
PTPN20-203ENST00000374342 PFKFB3Q16875 520 aaPredicted RBP19.46■□□□□ 0.71
PTPN20-203ENST00000374342 CFAP100Q494V2 611 aa19.46■□□□□ 0.71
PTPN20-203ENST00000374342 CKAP2LQ8IYA6 745 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms