RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 RNF10Q8N5U6 811 aaKnown RBP15.79■□□□□ 0.12
LMX1B-202ENST00000373474 HAUS7Q99871 368 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 SAMD9LQ8IVG5 1584 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 GKAP1Q5VSY0 366 aaPredicted RBP15.79■□□□□ 0.12
LMX1B-202ENST00000373474 SEPT14Q6ZU15 432 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 TRMT44Q8IYL2 757 aaKnown RBP15.79■□□□□ 0.12
LMX1B-202ENST00000373474 MSANTD4Q8NCY6 345 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 CDC25BP30305 580 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 LRCH2Q5VUJ6 765 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 BANK1Q8NDB2 785 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 MCUR1Q96AQ8 359 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 GBP5Q96PP8 586 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 EYA3Q99504 573 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 HMGB1P1B2RPK0 211 aaPredicted RBP15.78■□□□□ 0.12
LMX1B-202ENST00000373474 RIMBP2O15034 1052 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 ARL1P40616 181 aaPredicted RBP15.78■□□□□ 0.12
LMX1B-202ENST00000373474 LONRF3Q496Y0 759 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 CABP7Q86V35 215 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 GAS2L3Q86XJ1 694 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 LRRC8AQ8IWT6 810 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 OSBPL3Q9H4L5 887 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.78■□□□□ 0.12
LMX1B-202ENST00000373474 ZBTB17Q13105 803 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 TAOK1Q7L7X3 1001 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 MRFAP1L1Q96HT8 127 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 ZBTB21Q9ULJ3 1066 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 CETN3O15182 167 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 TAF5LO75529 589 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 GCKP35557 465 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 ADCY7P51828 1080 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 AKNAD1Q5T1N1 836 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 CCDC62Q6P9F0 684 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 SLF1Q9BQI6 1058 aa15.78■□□□□ 0.12
LMX1B-202ENST00000373474 AATFQ9NY61 560 aaKnown RBP eCLIP15.78■□□□□ 0.12
LMX1B-202ENST00000373474 GOLGA6BA6NDN3 693 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 CLUL1Q15846 466 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 VPS52Q8N1B4 723 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 CABS1Q96KC9 395 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 USP28Q96RU2 1077 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 CSRNP2Q9H175 543 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 BLZF1Q9H2G9 400 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 ATP7BP35670 1465 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 HPDP32754 393 aaPredicted RBP15.77■□□□□ 0.12
LMX1B-202ENST00000373474 PPFIA1Q13136 1202 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 NBPF14Q5TI25 921 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 EDC3Q96F86 508 aaKnown RBP15.77■□□□□ 0.12
LMX1B-202ENST00000373474 ACTN4O43707 911 aaKnown RBP15.77■□□□□ 0.12
LMX1B-202ENST00000373474 PPFIA4O75335 1185 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 PRDM1O75626 825 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 IL17REQ8NFR9 667 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 PSMD1Q99460 953 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 LRWD1Q9UFC0 647 aa15.77■□□□□ 0.12
LMX1B-202ENST00000373474 IRX4P78413 519 aa15.77■□□□□ 0.11
LMX1B-202ENST00000373474 PPARAQ07869 468 aa15.77■□□□□ 0.11
LMX1B-202ENST00000373474 UBL4BQ8N7F7 174 aa15.77■□□□□ 0.11
LMX1B-202ENST00000373474 CMA1P23946 247 aa15.77■□□□□ 0.11
LMX1B-202ENST00000373474 ADKP55263 362 aaKnown RBP15.77■□□□□ 0.11
LMX1B-202ENST00000373474 EAF2Q96CJ1 260 aaPredicted RBP15.77■□□□□ 0.11
LMX1B-202ENST00000373474 ODF2LQ9ULJ1 636 aa15.77■□□□□ 0.11
LMX1B-202ENST00000373474 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.77■□□□□ 0.11
LMX1B-202ENST00000373474 KIF1BO60333 1816 aa15.77■□□□□ 0.11
LMX1B-202ENST00000373474 BRD3Q15059 726 aa15.76■□□□□ 0.11
LMX1B-202ENST00000373474 BCAP29Q9UHQ4 241 aa15.76■□□□□ 0.11
LMX1B-202ENST00000373474 KRT5P13647 590 aa15.76■□□□□ 0.11
LMX1B-202ENST00000373474 SNX29Q8TEQ0 813 aa15.76■□□□□ 0.11
LMX1B-202ENST00000373474 VPS54Q9P1Q0 977 aa15.76■□□□□ 0.11
LMX1B-202ENST00000373474 MLH3Q9UHC1 1453 aa15.76■□□□□ 0.11
LMX1B-202ENST00000373474 NOSTRINQ8IVI9 506 aa15.76■□□□□ 0.11
LMX1B-202ENST00000373474 ZNF496Q96IT1 587 aaPredicted RBP15.76■□□□□ 0.11
LMX1B-202ENST00000373474 MBD5Q9P267 1494 aa15.76■□□□□ 0.11
LMX1B-202ENST00000373474 SPOPO43791 374 aa15.76■□□□□ 0.11
LMX1B-202ENST00000373474 RBM6P78332 1123 aaKnown RBP15.76■□□□□ 0.11
LMX1B-202ENST00000373474 CALCRLQ16602 461 aa15.76■□□□□ 0.11
LMX1B-202ENST00000373474 LUC7L3O95232 432 aaKnown RBP15.75■□□□□ 0.11
LMX1B-202ENST00000373474 SLC8A1P32418 973 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 MAGEA1P43355 309 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 RASSF2P50749 326 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 PAK2Q13177 524 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 VSIG1Q86XK7 387 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 ARHGEF2Q92974 986 aaKnown RBP15.75■□□□□ 0.11
LMX1B-202ENST00000373474 CDCA7Q9BWT1 371 aaPredicted RBP15.75■□□□□ 0.11
LMX1B-202ENST00000373474 FAM169AQ9Y6X4 670 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 HSPD1P10809 573 aaKnown RBP15.75■□□□□ 0.11
LMX1B-202ENST00000373474 WDR44Q5JSH3 913 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 RPGRIP1Q96KN7 1286 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 NUCKS1Q9H1E3 243 aaKnown RBP15.75■□□□□ 0.11
LMX1B-202ENST00000373474 PLCB1Q9NQ66 1216 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 UFL1O94874 794 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 MRPS9P82933 396 aaKnown RBP15.75■□□□□ 0.11
LMX1B-202ENST00000373474 CFAP221Q4G0U5 840 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 SFMBT2Q5VUG0 894 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 FAM212AQ96EL1 285 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 VEZTQ9HBM0 779 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 TRIML1Q8N9V2 468 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
LMX1B-202ENST00000373474 BTG4Q9NY30 223 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 PPP2R2CQ9Y2T4 447 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 RNASE9P60153 205 aaKnown RBP15.75■□□□□ 0.11
LMX1B-202ENST00000373474 SYCE1Q8N0S2 351 aa15.75■□□□□ 0.11
LMX1B-202ENST00000373474 RAB3IPQ96QF0 476 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms