RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 PRPF3O43395 683 aaKnown RBP27.29■■□□□ 1.96
CDK9-201ENST00000373264 OLFM4Q6UX06 510 aa27.29■■□□□ 1.96
CDK9-201ENST00000373264 SFPQP23246 707 aaKnown RBP eCLIP27.29■■□□□ 1.96
CDK9-201ENST00000373264 TMTC3Q6ZXV5 915 aa27.29■■□□□ 1.96
CDK9-201ENST00000373264 UBE2Q2Q8WVN8 375 aa27.29■■□□□ 1.96
CDK9-201ENST00000373264 DHX58Q96C10 678 aa27.29■■□□□ 1.96
CDK9-201ENST00000373264 MAP7D2Q96T17 732 aa27.29■■□□□ 1.96
CDK9-201ENST00000373264 KRT2P35908 639 aa27.28■■□□□ 1.96
CDK9-201ENST00000373264 NPHP1O15259 732 aa27.28■■□□□ 1.96
CDK9-201ENST00000373264 NCBP1Q09161 790 aaKnown RBP27.28■■□□□ 1.96
CDK9-201ENST00000373264 NFIXQ14938 502 aa27.28■■□□□ 1.96
CDK9-201ENST00000373264 DYNLL2Q96FJ2 89 aa27.28■■□□□ 1.96
CDK9-201ENST00000373264 NYXQ9GZU5 481 aa27.28■■□□□ 1.96
CDK9-201ENST00000373264 CNTNAP5Q8WYK1 1306 aa27.27■■□□□ 1.96
CDK9-201ENST00000373264 TRIM75PA6NK02 468 aa27.27■■□□□ 1.96
CDK9-201ENST00000373264 AFMP43652 599 aa27.27■■□□□ 1.96
CDK9-201ENST00000373264 TPTE2Q6XPS3 522 aa27.27■■□□□ 1.96
CDK9-201ENST00000373264 CCDC112Q8NEF3 446 aa27.27■■□□□ 1.96
CDK9-201ENST00000373264 CRNKL1Q9BZJ0 848 aaKnown RBP27.27■■□□□ 1.96
CDK9-201ENST00000373264 MCM9Q9NXL9 1143 aa27.27■■□□□ 1.96
CDK9-201ENST00000373264 DIXDC1Q155Q3 683 aa27.26■■□□□ 1.95
CDK9-201ENST00000373264 STAMQ92783 540 aa27.26■■□□□ 1.95
CDK9-201ENST00000373264 TNRC6CQ9HCJ0 1690 aaKnown RBP27.26■■□□□ 1.95
CDK9-201ENST00000373264 SARSP49591 514 aaKnown RBP27.26■■□□□ 1.95
CDK9-201ENST00000373264 VPS72Q15906 364 aa27.26■■□□□ 1.95
CDK9-201ENST00000373264 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.26■■□□□ 1.95
CDK9-201ENST00000373264 RTCBQ9Y3I0 505 aaKnown RBP27.26■■□□□ 1.95
CDK9-201ENST00000373264 V9GYY5 206 aaPredicted RBP27.26■■□□□ 1.95
CDK9-201ENST00000373264 BTAF1O14981 1849 aa27.26■■□□□ 1.95
CDK9-201ENST00000373264 RCSD1Q6JBY9 416 aa27.25■■□□□ 1.95
CDK9-201ENST00000373264 TNFRSF25Q93038 417 aa27.25■■□□□ 1.95
CDK9-201ENST00000373264 PPP1R13BQ96KQ4 1090 aa27.25■■□□□ 1.95
CDK9-201ENST00000373264 IRS2Q9Y4H2 1338 aa27.25■■□□□ 1.95
CDK9-201ENST00000373264 SEMA3EO15041 775 aa27.25■■□□□ 1.95
CDK9-201ENST00000373264 CCDC150Q8NCX0 1101 aa27.25■■□□□ 1.95
CDK9-201ENST00000373264 SYMPKQ92797 1274 aaKnown RBP27.25■■□□□ 1.95
CDK9-201ENST00000373264 SMARCE1Q969G3 411 aa27.25■■□□□ 1.95
CDK9-201ENST00000373264 MTMR7Q9Y216 660 aa27.25■■□□□ 1.95
CDK9-201ENST00000373264 ZNF579Q8NAF0 562 aaKnown RBP27.24■■□□□ 1.95
CDK9-201ENST00000373264 ANKRD7Q92527 254 aa27.24■■□□□ 1.95
CDK9-201ENST00000373264 ANKIB1Q9P2G1 1089 aa27.24■■□□□ 1.95
CDK9-201ENST00000373264 NFE2L3Q9Y4A8 694 aa27.24■■□□□ 1.95
CDK9-201ENST00000373264 PAXBP1Q9Y5B6 917 aa27.24■■□□□ 1.95
CDK9-201ENST00000373264 TSPY2A6NKD2 308 aa27.24■■□□□ 1.95
CDK9-201ENST00000373264 MORC3Q14149 939 aa27.24■■□□□ 1.95
CDK9-201ENST00000373264 DZIP1Q86YF9 867 aaKnown RBP27.24■■□□□ 1.95
CDK9-201ENST00000373264 ANKRD2Q9GZV1 360 aa27.24■■□□□ 1.95
CDK9-201ENST00000373264 SAMSN1Q9NSI8 373 aaKnown RBP27.24■■□□□ 1.95
CDK9-201ENST00000373264 ORC4O43929 436 aa27.23■■□□□ 1.95
CDK9-201ENST00000373264 XBP1P17861 261 aa27.23■■□□□ 1.95
CDK9-201ENST00000373264 SMYD4Q8IYR2 804 aaPredicted RBP27.23■■□□□ 1.95
CDK9-201ENST00000373264 COBLO75128 1261 aa27.23■■□□□ 1.95
CDK9-201ENST00000373264 PPP4R3BQ5MIZ7 849 aa27.23■■□□□ 1.95
CDK9-201ENST00000373264 RC3H1Q5TC82 1133 aaKnown RBP27.23■■□□□ 1.95
CDK9-201ENST00000373264 NT5DC1Q5TFE4 455 aa27.23■■□□□ 1.95
CDK9-201ENST00000373264 SLC44A5Q8NCS7 719 aa27.23■■□□□ 1.95
CDK9-201ENST00000373264 SH3RF3Q8TEJ3 882 aaPredicted RBP27.23■■□□□ 1.95
CDK9-201ENST00000373264 RBM28Q9NW13 759 aaKnown RBP27.23■■□□□ 1.95
CDK9-201ENST00000373264 CEP131Q9UPN4 1083 aa27.23■■□□□ 1.95
CDK9-201ENST00000373264 VWA3AA6NCI4 1184 aa27.22■■□□□ 1.95
CDK9-201ENST00000373264 PPP2R5BQ15173 497 aa27.22■■□□□ 1.95
CDK9-201ENST00000373264 PIK3AP1Q6ZUJ8 805 aa27.22■■□□□ 1.95
CDK9-201ENST00000373264 VSTM4Q8IW00 320 aa27.22■■□□□ 1.95
CDK9-201ENST00000373264 CTCFLQ8NI51 663 aaPredicted RBP27.22■■□□□ 1.95
CDK9-201ENST00000373264 IL17RBQ9NRM6 502 aa27.22■■□□□ 1.95
CDK9-201ENST00000373264 GOLGB1Q14789 3259 aaKnown RBP27.22■■□□□ 1.95
CDK9-201ENST00000373264 DLEC1Q9Y238 1755 aa27.22■■□□□ 1.95
CDK9-201ENST00000373264 DDAH1O94760 285 aa27.22■■□□□ 1.95
CDK9-201ENST00000373264 STAG2Q8N3U4 1231 aa27.22■■□□□ 1.95
CDK9-201ENST00000373264 GPKOWQ92917 476 aaPredicted RBP eCLIP27.22■■□□□ 1.952e-6■■□□□ 12.7
CDK9-201ENST00000373264 ZNF831Q5JPB2 1677 aa27.21■■□□□ 1.95
CDK9-201ENST00000373264 RASGRP2Q7LDG7 609 aa27.21■■□□□ 1.95
CDK9-201ENST00000373264 MTERF4Q7Z6M4 381 aaKnown RBP27.21■■□□□ 1.95
CDK9-201ENST00000373264 ATP8A2Q9NTI2 1148 aa27.21■■□□□ 1.95
CDK9-201ENST00000373264 COL24A1Q17RW2 1714 aa27.21■■□□□ 1.95
CDK9-201ENST00000373264 KIAA1551Q9HCM1 1747 aa27.21■■□□□ 1.95
CDK9-201ENST00000373264 CD44P16070 742 aaKnown RBP27.21■■□□□ 1.95
CDK9-201ENST00000373264 PTGDRQ13258 359 aa27.21■■□□□ 1.95
CDK9-201ENST00000373264 ZNF215Q9UL58 517 aaPredicted RBP27.21■■□□□ 1.95
CDK9-201ENST00000373264 USP17L3A6NCW0 530 aa27.2■■□□□ 1.94
CDK9-201ENST00000373264 USP17L4A6NCW7 530 aa27.2■■□□□ 1.94
CDK9-201ENST00000373264 TFAP4Q01664 338 aa27.2■■□□□ 1.94
CDK9-201ENST00000373264 TTC38Q5R3I4 469 aa27.2■■□□□ 1.94
CDK9-201ENST00000373264 KLHL10Q6JEL2 608 aa27.2■■□□□ 1.94
CDK9-201ENST00000373264 USP17L1Q7RTZ2 530 aa27.2■■□□□ 1.94
CDK9-201ENST00000373264 PDCL2Q8N4E4 241 aa27.2■■□□□ 1.94
CDK9-201ENST00000373264 STX17P56962 302 aa27.19■■□□□ 1.94
CDK9-201ENST00000373264 IL17AQ16552 155 aa27.19■■□□□ 1.94
CDK9-201ENST00000373264 RASGRP4Q8TDF6 673 aa27.19■■□□□ 1.94
CDK9-201ENST00000373264 CALM1P0DP23 149 aa27.19■■□□□ 1.94
CDK9-201ENST00000373264 CALM2P0DP24 149 aa27.19■■□□□ 1.94
CDK9-201ENST00000373264 CALM3P0DP25 149 aa27.19■■□□□ 1.94
CDK9-201ENST00000373264 ARPP21Q9UBL0 812 aaPredicted RBP27.19■■□□□ 1.94
CDK9-201ENST00000373264 HOOK1Q9UJC3 728 aaKnown RBP27.19■■□□□ 1.94
CDK9-201ENST00000373264 TOP1P11387 765 aaKnown RBP27.18■■□□□ 1.94
CDK9-201ENST00000373264 SCG2P13521 617 aa27.18■■□□□ 1.94
CDK9-201ENST00000373264 MCM7P33993 719 aa27.18■■□□□ 1.94
CDK9-201ENST00000373264 NLRP5P59047 1200 aa27.18■■□□□ 1.94
CDK9-201ENST00000373264 SYT10Q6XYQ8 523 aa27.18■■□□□ 1.94
CDK9-201ENST00000373264 PAGE5Q96GU1 130 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms