RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 FKBP15Q5T1M5 1219 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 NT5DC1Q5TFE4 455 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 KANK3Q6NY19 840 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.54□□□□□ -0.24
SNX21-205ENST00000372547 SYNE4Q8N205 404 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 TRIML1Q8N9V2 468 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 MMS19Q96T76 1030 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 ABHD10Q9NUJ1 306 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 FMNL1O95466 1100 aaPredicted RBP13.54□□□□□ -0.24
SNX21-205ENST00000372547 LIG3P49916 1009 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 CHRNA2Q15822 529 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 RTN1Q16799 776 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 RRAGBQ5VZM2 374 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 CTAGE1Q96RT6 745 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 CRACR2AQ9BSW2 395 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 NAPBQ9H115 298 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 PIH1D3Q9NQM4 214 aaKnown RBP13.54□□□□□ -0.24
SNX21-205ENST00000372547 CYP27B1O15528 508 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 SYF2O95926 243 aaKnown RBP13.54□□□□□ -0.24
SNX21-205ENST00000372547 CORO7P57737 925 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 DPYDQ12882 1025 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 KRT31Q15323 416 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 CYP26C1Q6V0L0 522 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 TMTC1Q8IUR5 882 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 SYMPKQ92797 1274 aaKnown RBP13.54□□□□□ -0.24
SNX21-205ENST00000372547 EEF2KMTQ96G04 330 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 PAGE5Q96GU1 130 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 TMEM87BQ96K49 555 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 MED4Q9NPJ6 270 aa13.54□□□□□ -0.24
SNX21-205ENST00000372547 SRPRBQ9Y5M8 271 aaKnown RBP13.54□□□□□ -0.24
SNX21-205ENST00000372547 OVOS2A0A0G2JMS6 1433 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 PRDM1O75626 825 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 ADD2P35612 726 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 GGCXP38435 758 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 ARHGAP25P42331 645 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 CCT5P48643 541 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 STIM1Q13586 685 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 WASF1Q92558 559 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 DEF6Q9H4E7 631 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 PPFIA4O75335 1185 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 ATP1A1P05023 1023 aaKnown RBP13.53□□□□□ -0.24
SNX21-205ENST00000372547 UBXN1Q04323 297 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 IFIT5Q13325 482 aaKnown RBP13.53□□□□□ -0.24
SNX21-205ENST00000372547 ZNF174Q15697 407 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 LDHAL6AQ6ZMR3 332 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 EHD4Q9H223 541 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 CNNM1Q9NRU3 951 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 VPS54Q9P1Q0 977 aa13.53□□□□□ -0.24
SNX21-205ENST00000372547 CIAO1O76071 339 aa13.52□□□□□ -0.24
SNX21-205ENST00000372547 CUL4BQ13620 913 aa13.52□□□□□ -0.24
SNX21-205ENST00000372547 CCDC122Q5T0U0 273 aa13.52□□□□□ -0.24
SNX21-205ENST00000372547 HELBQ8NG08 1087 aaPredicted RBP13.52□□□□□ -0.24
SNX21-205ENST00000372547 CEP131Q9UPN4 1083 aa13.52□□□□□ -0.24
SNX21-205ENST00000372547 C4AP0C0L4 1744 aa13.52□□□□□ -0.25
SNX21-205ENST00000372547 C4BP0C0L5 1744 aa13.52□□□□□ -0.25
SNX21-205ENST00000372547 LOC102724159A0A0B4J2E5 919 aa13.52□□□□□ -0.25
SNX21-205ENST00000372547 ZNF185O15231 689 aa13.52□□□□□ -0.25
SNX21-205ENST00000372547 PBX1P40424 430 aa13.52□□□□□ -0.25
SNX21-205ENST00000372547 TUBB2AQ13885 445 aa13.52□□□□□ -0.25
SNX21-205ENST00000372547 PWP2Q15269 919 aaKnown RBP13.52□□□□□ -0.25
SNX21-205ENST00000372547 GPIHBP1Q8IV16 184 aa13.52□□□□□ -0.25
SNX21-205ENST00000372547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNX21-205ENST00000372547 DCAF5Q96JK2 942 aa13.52□□□□□ -0.25
SNX21-205ENST00000372547 TUBB2BQ9BVA1 445 aa13.52□□□□□ -0.25
SNX21-205ENST00000372547 ARMT1Q9H993 441 aa13.52□□□□□ -0.25
SNX21-205ENST00000372547 HPCAL4Q9UM19 191 aa13.52□□□□□ -0.25
SNX21-205ENST00000372547 EPN1Q9Y6I3 576 aaPredicted RBP13.52□□□□□ -0.25
SNX21-205ENST00000372547 WDR19Q8NEZ3 1342 aa13.52□□□□□ -0.25
SNX21-205ENST00000372547 TRIM75PA6NK02 468 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 PPP1R3GB7ZBB8 358 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 RPS6KA5O75582 802 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 WTAPQ15007 396 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 EARS2Q5JPH6 523 aaKnown RBP13.51□□□□□ -0.25
SNX21-205ENST00000372547 KIAA1328Q86T90 577 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 GNL3LQ9NVN8 582 aaKnown RBP13.51□□□□□ -0.25
SNX21-205ENST00000372547 ERICH2A1L162 156 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 PRKAB2O43741 272 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 MBD4O95243 580 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 MYBL2P10244 700 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 IFNAR1P17181 557 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 GPTP24298 496 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 MATR3P43243 847 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNX21-205ENST00000372547 USP14P54578 494 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 CDKAL1Q5VV42 579 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 MFSD6Q6ZSS7 791 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 JADE2Q9NQC1 790 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 TBC1D2BQ9UPU7 963 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 SAR1BQ9Y6B6 198 aa13.51□□□□□ -0.25
SNX21-205ENST00000372547 NDUFA10O95299 355 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 PDE6AP16499 860 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 TDO2P48775 406 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 COPB1P53618 953 aaKnown RBP13.5□□□□□ -0.25
SNX21-205ENST00000372547 MAP9Q49MG5 647 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 ANKRD20A12PQ8NF67 263 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 FOXP1Q9H334 677 aaPredicted RBP13.5□□□□□ -0.25
SNX21-205ENST00000372547 ARFGEF2Q9Y6D5 1785 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 MACROD2A1Z1Q3 448 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 WNT7AO00755 349 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 TUBB4BP68371 445 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms