RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ORC4O43929 436 aa16.29■□□□□ 0.2
SSR4-202ENST00000370085 RANBP6O60518 1105 aaKnown RBP16.29■□□□□ 0.2
SSR4-202ENST00000370085 PRDM1O75626 825 aa16.29■□□□□ 0.2
SSR4-202ENST00000370085 BACE1P56817 501 aa16.29■□□□□ 0.2
SSR4-202ENST00000370085 SEPT2Q15019 361 aa16.29■□□□□ 0.2
SSR4-202ENST00000370085 RRP12Q5JTH9 1297 aaKnown RBP16.29■□□□□ 0.2
SSR4-202ENST00000370085 RNF20Q5VTR2 975 aa16.29■□□□□ 0.2
SSR4-202ENST00000370085 GADL1Q6ZQY3 521 aa16.29■□□□□ 0.2
SSR4-202ENST00000370085 PROCA1Q8NCQ7 364 aaPredicted RBP16.29■□□□□ 0.2
SSR4-202ENST00000370085 ESR2Q92731 530 aa16.29■□□□□ 0.2
SSR4-202ENST00000370085 MAP4K1Q92918 833 aa16.29■□□□□ 0.2
SSR4-202ENST00000370085 IL25Q9H293 177 aa16.29■□□□□ 0.2
SSR4-202ENST00000370085 TFAP4Q01664 338 aa16.28■□□□□ 0.2
SSR4-202ENST00000370085 ATP2B2Q01814 1243 aa16.28■□□□□ 0.2
SSR4-202ENST00000370085 MTMR2Q13614 643 aa16.28■□□□□ 0.2
SSR4-202ENST00000370085 USP17L2Q6R6M4 530 aa16.28■□□□□ 0.2
SSR4-202ENST00000370085 ANKRD23Q86SG2 305 aa16.28■□□□□ 0.2
SSR4-202ENST00000370085 CCDC84Q86UT8 332 aaPredicted RBP16.28■□□□□ 0.2
SSR4-202ENST00000370085 BRI3BPQ8WY22 251 aa16.28■□□□□ 0.2
SSR4-202ENST00000370085 KRT23Q9C075 422 aa16.28■□□□□ 0.2
SSR4-202ENST00000370085 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.28■□□□□ 0.2
SSR4-202ENST00000370085 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
SSR4-202ENST00000370085 PTPRFP10586 1907 aa16.27■□□□□ 0.2
SSR4-202ENST00000370085 SMIM22K7EJ46 135 aa16.27■□□□□ 0.2
SSR4-202ENST00000370085 FGRP09769 529 aa16.27■□□□□ 0.2
SSR4-202ENST00000370085 HMGCS2P54868 508 aa16.27■□□□□ 0.2
SSR4-202ENST00000370085 JAG1P78504 1218 aa16.27■□□□□ 0.2
SSR4-202ENST00000370085 PTH1RQ03431 593 aa16.27■□□□□ 0.2
SSR4-202ENST00000370085 CCDC178Q5BJE1 867 aa16.27■□□□□ 0.2
SSR4-202ENST00000370085 SH3D19Q5HYK7 790 aa16.27■□□□□ 0.2
SSR4-202ENST00000370085 NEDD1Q8NHV4 660 aa16.27■□□□□ 0.2
SSR4-202ENST00000370085 KIAA1683Q9H0B3 1180 aa16.27■□□□□ 0.2
SSR4-202ENST00000370085 PNMA3Q9UL41 463 aa16.27■□□□□ 0.2
SSR4-202ENST00000370085 SLC45A1Q9Y2W3 748 aa16.27■□□□□ 0.2
SSR4-202ENST00000370085 RBM8AQ9Y5S9 174 aaKnown RBP16.27■□□□□ 0.2
SSR4-202ENST00000370085 PLIN4Q96Q06 1357 aa16.26■□□□□ 0.19
SSR4-202ENST00000370085 TRPA1O75762 1119 aa16.26■□□□□ 0.19
SSR4-202ENST00000370085 TTLL1O95922 423 aa16.26■□□□□ 0.19
SSR4-202ENST00000370085 HSPA1AP0DMV8 641 aaKnown RBP16.26■□□□□ 0.19
SSR4-202ENST00000370085 HSPA1BP0DMV9 641 aaKnown RBP16.26■□□□□ 0.19
SSR4-202ENST00000370085 SHROOM1Q2M3G4 852 aaPredicted RBP16.26■□□□□ 0.19
SSR4-202ENST00000370085 RALYLQ86SE5 291 aaKnown RBP16.26■□□□□ 0.19
SSR4-202ENST00000370085 IQCA1Q86XH1 822 aa16.26■□□□□ 0.19
SSR4-202ENST00000370085 LSG1Q9H089 658 aaKnown RBP16.26■□□□□ 0.19
SSR4-202ENST00000370085 ZFYVE28Q9HCC9 887 aa16.26■□□□□ 0.19
SSR4-202ENST00000370085 GOPCQ9HD26 462 aa16.26■□□□□ 0.19
SSR4-202ENST00000370085 RNF186Q9NXI6 227 aa16.26■□□□□ 0.19
SSR4-202ENST00000370085 AGTPBP1Q9UPW5 1226 aa16.26■□□□□ 0.19
SSR4-202ENST00000370085 BTBD19C9JJ37 291 aa16.25■□□□□ 0.19
SSR4-202ENST00000370085 IGF2BP3O00425 579 aaKnown RBP eCLIP16.25■□□□□ 0.19
SSR4-202ENST00000370085 GUCY1A2P33402 732 aa16.25■□□□□ 0.19
SSR4-202ENST00000370085 CTCFP49711 727 aaPredicted RBP16.25■□□□□ 0.19
SSR4-202ENST00000370085 TAF1CQ15572 869 aaPredicted RBP16.25■□□□□ 0.19
SSR4-202ENST00000370085 FAM47AQ5JRC9 791 aa16.25■□□□□ 0.19
SSR4-202ENST00000370085 LPAR1Q92633 364 aa16.25■□□□□ 0.19
SSR4-202ENST00000370085 PARK7Q99497 189 aaKnown RBP16.25■□□□□ 0.19
SSR4-202ENST00000370085 NYAP2Q9P242 653 aa16.25■□□□□ 0.19
SSR4-202ENST00000370085 SYNPO2Q9UMS6 1093 aa16.25■□□□□ 0.19
SSR4-202ENST00000370085 GREB1LQ9C091 1923 aaPredicted RBP16.24■□□□□ 0.19
SSR4-202ENST00000370085 PDHXO00330 501 aa16.24■□□□□ 0.19
SSR4-202ENST00000370085 EPB41L2O43491 1005 aaKnown RBP16.24■□□□□ 0.19
SSR4-202ENST00000370085 EEF2P13639 858 aaKnown RBP16.24■□□□□ 0.19
SSR4-202ENST00000370085 ZKSCAN1P17029 563 aaPredicted RBP16.24■□□□□ 0.19
SSR4-202ENST00000370085 OSBPP22059 807 aa16.24■□□□□ 0.19
SSR4-202ENST00000370085 ZYXQ15942 572 aaKnown RBP16.24■□□□□ 0.19
SSR4-202ENST00000370085 TBC1D10CQ8IV04 446 aa16.24■□□□□ 0.19
SSR4-202ENST00000370085 CEP95Q96GE4 821 aa16.24■□□□□ 0.19
SSR4-202ENST00000370085 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
SSR4-202ENST00000370085 PTPN18Q99952 460 aa16.24■□□□□ 0.19
SSR4-202ENST00000370085 CFHR5Q9BXR6 569 aa16.24■□□□□ 0.19
SSR4-202ENST00000370085 MTMR4Q9NYA4 1195 aa16.24■□□□□ 0.19
SSR4-202ENST00000370085 STX8Q9UNK0 236 aa16.24■□□□□ 0.19
SSR4-202ENST00000370085 TMX2Q9Y320 296 aa16.24■□□□□ 0.19
SSR4-202ENST00000370085 LOC285556D6RIA3 1793 aa16.23■□□□□ 0.19
SSR4-202ENST00000370085 RAD21O60216 631 aa16.23■□□□□ 0.19
SSR4-202ENST00000370085 CYP21A2P08686 494 aa16.23■□□□□ 0.19
SSR4-202ENST00000370085 MCCP23508 829 aa16.23■□□□□ 0.19
SSR4-202ENST00000370085 IRX3P78415 501 aaPredicted RBP16.23■□□□□ 0.19
SSR4-202ENST00000370085 FAM43AQ8N2R8 423 aa16.23■□□□□ 0.19
SSR4-202ENST00000370085 NCOA7Q8NI08 942 aa16.23■□□□□ 0.19
SSR4-202ENST00000370085 ACER1Q8TDN7 264 aa16.23■□□□□ 0.19
SSR4-202ENST00000370085 SMCR8Q8TEV9 937 aaPredicted RBP16.23■□□□□ 0.19
SSR4-202ENST00000370085 UBAC1Q9BSL1 405 aa16.23■□□□□ 0.19
SSR4-202ENST00000370085 TCP11L1Q9NUJ3 509 aa16.23■□□□□ 0.19
SSR4-202ENST00000370085 CLIP2Q9UDT6 1046 aa16.23■□□□□ 0.19
SSR4-202ENST00000370085 MYH4Q9Y623 1939 aa16.23■□□□□ 0.19
SSR4-202ENST00000370085 KDM4AO75164 1064 aa16.22■□□□□ 0.19
SSR4-202ENST00000370085 KRT32Q14532 448 aa16.22■□□□□ 0.19
SSR4-202ENST00000370085 SART3Q15020 963 aaKnown RBP16.22■□□□□ 0.19
SSR4-202ENST00000370085 TTC14Q96N46 770 aa16.22■□□□□ 0.19
SSR4-202ENST00000370085 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.22■□□□□ 0.19
SSR4-202ENST00000370085 NBPF3Q9H094 633 aa16.22■□□□□ 0.19
SSR4-202ENST00000370085 VCPKMTQ9H867 229 aa16.22■□□□□ 0.19
SSR4-202ENST00000370085 INCENPQ9NQS7 918 aa16.22■□□□□ 0.19
SSR4-202ENST00000370085 NEDD4P46934 1319 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 IGKV6D-41A0A0C4DH26 115 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 ERICH2A1L162 156 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 B4E1Z4 1266 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 USP17L15C9J2P7 530 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 USP17L13C9JLJ4 530 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms