RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 HOOK1Q9UJC3 728 aaKnown RBP13.16□□□□□ -0.3
RAB39B-201ENST00000369454 COL16A1Q07092 1604 aaPredicted RBP13.16□□□□□ -0.3
RAB39B-201ENST00000369454 NLRP5P59047 1200 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 TROAPQ12815 778 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 NYAP1Q6ZVC0 841 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 CCDC150Q8NCX0 1101 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 SYMPKQ92797 1274 aaKnown RBP13.16□□□□□ -0.3
RAB39B-201ENST00000369454 RNF26Q9BY78 433 aaPredicted RBP13.16□□□□□ -0.3
RAB39B-201ENST00000369454 ZMYND15Q9H091 742 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 BLZF1Q9H2G9 400 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 IMPACTQ9P2X3 320 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 RTL9Q8NET4 1388 aa13.15□□□□□ -0.3
RAB39B-201ENST00000369454 CTIFO43310 598 aaKnown RBP13.15□□□□□ -0.3
RAB39B-201ENST00000369454 IGSF3O75054 1194 aa13.15□□□□□ -0.3
RAB39B-201ENST00000369454 CRNKL1Q9BZJ0 848 aaKnown RBP13.15□□□□□ -0.3
RAB39B-201ENST00000369454 SAP30BPQ9UHR5 308 aaKnown RBP13.15□□□□□ -0.3
RAB39B-201ENST00000369454 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
RAB39B-201ENST00000369454 USP5P45974 858 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 MDM2Q00987 491 aaPredicted RBP13.14□□□□□ -0.31
RAB39B-201ENST00000369454 SLC44A5Q8NCS7 719 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 CPVLQ9H3G5 476 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 DNAI1Q9UI46 699 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 CEP131Q9UPN4 1083 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 MAPK8IP1Q9UQF2 711 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 PTGDRQ13258 359 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 ELF2Q15723 593 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 LRRN4CLQ8ND94 238 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 INTS13Q9NVM9 706 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 CCNL1Q9UK58 526 aaPredicted RBP13.14□□□□□ -0.31
RAB39B-201ENST00000369454 GRIK5Q16478 980 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 TPTE2Q6XPS3 522 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 RASGRP2Q7LDG7 609 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 FBXO33Q7Z6M2 555 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 PLIN2Q99541 437 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 CHD4Q14839 1912 aa13.14□□□□□ -0.31
RAB39B-201ENST00000369454 TFAP4Q01664 338 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 NFIXQ14938 502 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 BRIP1Q9BX63 1249 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 BRMS1Q9HCU9 246 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 STX8Q9UNK0 236 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 USP17L3A6NCW0 530 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 USP17L4A6NCW7 530 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 CBFA2T2O43439 604 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 ACTN4O43707 911 aaKnown RBP13.13□□□□□ -0.31
RAB39B-201ENST00000369454 FUT2Q10981 343 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 USP17L1Q7RTZ2 530 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 PHF20Q9BVI0 1012 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 ANAPC4Q9UJX5 808 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 LRP5O75197 1615 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 DDX60Q8IY21 1712 aaKnown RBP13.13□□□□□ -0.31
RAB39B-201ENST00000369454 TTC38Q5R3I4 469 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 TMTC3Q6ZXV5 915 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 STAG2Q8N3U4 1231 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
RAB39B-201ENST00000369454 MED15Q96RN5 788 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 MKNK2Q9HBH9 465 aa13.13□□□□□ -0.31
RAB39B-201ENST00000369454 RTCBQ9Y3I0 505 aaKnown RBP13.13□□□□□ -0.31
RAB39B-201ENST00000369454 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
RAB39B-201ENST00000369454 GOLGA8HP0CJ92 632 aa13.12□□□□□ -0.31
RAB39B-201ENST00000369454 VSTM4Q8IW00 320 aa13.12□□□□□ -0.31
RAB39B-201ENST00000369454 RASSF8Q8NHQ8 419 aa13.12□□□□□ -0.31
RAB39B-201ENST00000369454 ANKRD7Q92527 254 aa13.12□□□□□ -0.31
RAB39B-201ENST00000369454 DESI2Q9BSY9 194 aa13.12□□□□□ -0.31
RAB39B-201ENST00000369454 BCL9LQ86UU0 1499 aa13.12□□□□□ -0.31
RAB39B-201ENST00000369454 FAM237AA0A1B0GTK4 181 aa13.12□□□□□ -0.31
RAB39B-201ENST00000369454 PRPF3O43395 683 aaKnown RBP13.12□□□□□ -0.31
RAB39B-201ENST00000369454 TGFBRAP1Q8WUH2 860 aa13.12□□□□□ -0.31
RAB39B-201ENST00000369454 MAPKAPK5Q8IW41 473 aa13.12□□□□□ -0.31
RAB39B-201ENST00000369454 NARFQ9UHQ1 456 aa13.12□□□□□ -0.31
RAB39B-201ENST00000369454 ECM29Q5VYK3 1845 aa13.11□□□□□ -0.31
RAB39B-201ENST00000369454 TEX33O43247 280 aa13.11□□□□□ -0.31
RAB39B-201ENST00000369454 CD44P16070 742 aaKnown RBP13.11□□□□□ -0.31
RAB39B-201ENST00000369454 RFC4P35249 363 aa13.11□□□□□ -0.31
RAB39B-201ENST00000369454 SH3RF3Q8TEJ3 882 aaPredicted RBP13.11□□□□□ -0.31
RAB39B-201ENST00000369454 KAT14Q9H8E8 782 aa13.11□□□□□ -0.31
RAB39B-201ENST00000369454 ERCC6LQ2NKX8 1250 aa13.11□□□□□ -0.31
RAB39B-201ENST00000369454 PAGE5Q96GU1 130 aa13.11□□□□□ -0.31
RAB39B-201ENST00000369454 CNTNAP5Q8WYK1 1306 aa13.11□□□□□ -0.31
RAB39B-201ENST00000369454 URI1O94763 535 aaPredicted RBP13.1□□□□□ -0.31
RAB39B-201ENST00000369454 MORC3Q14149 939 aa13.1□□□□□ -0.31
RAB39B-201ENST00000369454 BARGINQ6ZT62 677 aa13.1□□□□□ -0.31
RAB39B-201ENST00000369454 EEF2KMTQ96G04 330 aa13.1□□□□□ -0.31
RAB39B-201ENST00000369454 NYXQ9GZU5 481 aa13.1□□□□□ -0.31
RAB39B-201ENST00000369454 RBM28Q9NW13 759 aaKnown RBP13.1□□□□□ -0.31
RAB39B-201ENST00000369454 MYH13Q9UKX3 1938 aa13.1□□□□□ -0.31
RAB39B-201ENST00000369454 LDHBP07195 334 aaKnown RBP13.1□□□□□ -0.31
RAB39B-201ENST00000369454 SCG2P13521 617 aa13.1□□□□□ -0.31
RAB39B-201ENST00000369454 CCT6AP40227 531 aaKnown RBP13.1□□□□□ -0.31
RAB39B-201ENST00000369454 MLKLQ8NB16 471 aa13.1□□□□□ -0.31
RAB39B-201ENST00000369454 KARSQ15046 597 aaKnown RBP13.1□□□□□ -0.31
RAB39B-201ENST00000369454 VAT1LQ9HCJ6 419 aa13.1□□□□□ -0.31
RAB39B-201ENST00000369454 DOCK2Q92608 1830 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 RPS6KA4O75676 772 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 MTF1Q14872 753 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 NPY5RQ15761 445 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 HEATR3Q7Z4Q2 680 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 PNMA1Q8ND90 353 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 ZBTB9Q96C00 473 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 BAG1Q99933 345 aaPredicted RBP13.09□□□□□ -0.31
RAB39B-201ENST00000369454 PP2D1A8MPX8 630 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms