RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 SH3D19Q5HYK7 790 aa17.94■□□□□ 0.46
SMPDL3A-201ENST00000368440 TREML2Q5T2D2 321 aa17.94■□□□□ 0.46
SMPDL3A-201ENST00000368440 OTUD7BQ6GQQ9 843 aa17.94■□□□□ 0.46
SMPDL3A-201ENST00000368440 ANKRD23Q86SG2 305 aa17.94■□□□□ 0.46
SMPDL3A-201ENST00000368440 RUFY2Q8WXA3 655 aa17.94■□□□□ 0.46
SMPDL3A-201ENST00000368440 DSCC1Q9BVC3 393 aa17.94■□□□□ 0.46
SMPDL3A-201ENST00000368440 CFHR5Q9BXR6 569 aa17.94■□□□□ 0.46
SMPDL3A-201ENST00000368440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.94■□□□□ 0.46
SMPDL3A-201ENST00000368440 PDHXO00330 501 aa17.93■□□□□ 0.46
SMPDL3A-201ENST00000368440 PTH1RQ03431 593 aa17.93■□□□□ 0.46
SMPDL3A-201ENST00000368440 TAF1CQ15572 869 aaPredicted RBP17.93■□□□□ 0.46
SMPDL3A-201ENST00000368440 ZYXQ15942 572 aaKnown RBP17.93■□□□□ 0.46
SMPDL3A-201ENST00000368440 A0A1W2PRG0 241 aa17.92■□□□□ 0.46
SMPDL3A-201ENST00000368440 USP17L10C9JJH3 530 aa17.92■□□□□ 0.46
SMPDL3A-201ENST00000368440 FASTKD5Q7L8L6 764 aaKnown RBP17.92■□□□□ 0.46
SMPDL3A-201ENST00000368440 SIAH1Q8IUQ4 282 aa17.92■□□□□ 0.46
SMPDL3A-201ENST00000368440 MYH4Q9Y623 1939 aa17.92■□□□□ 0.46
SMPDL3A-201ENST00000368440 SLC3A2P08195 630 aaKnown RBP17.92■□□□□ 0.46
SMPDL3A-201ENST00000368440 PDE4BQ07343 736 aa17.92■□□□□ 0.46
SMPDL3A-201ENST00000368440 TBC1D10CQ8IV04 446 aa17.92■□□□□ 0.46
SMPDL3A-201ENST00000368440 PROCA1Q8NCQ7 364 aaPredicted RBP17.92■□□□□ 0.46
SMPDL3A-201ENST00000368440 EMILIN3Q9NT22 766 aa17.92■□□□□ 0.46
SMPDL3A-201ENST00000368440 ICA1Q05084 483 aa17.91■□□□□ 0.46
SMPDL3A-201ENST00000368440 FAM47AQ5JRC9 791 aa17.91■□□□□ 0.46
SMPDL3A-201ENST00000368440 FEZ1Q99689 392 aa17.91■□□□□ 0.46
SMPDL3A-201ENST00000368440 ESYT1Q9BSJ8 1104 aa17.91■□□□□ 0.46
SMPDL3A-201ENST00000368440 ZCCHC17Q9NP64 241 aaKnown RBP17.91■□□□□ 0.46
SMPDL3A-201ENST00000368440 AGTPBP1Q9UPW5 1226 aa17.91■□□□□ 0.46
SMPDL3A-201ENST00000368440 ZSWIM8A7E2V4 1837 aa17.91■□□□□ 0.46
SMPDL3A-201ENST00000368440 ZNF444Q8N0Y2 327 aaPredicted RBP17.9■□□□□ 0.46
SMPDL3A-201ENST00000368440 NKX2-3Q8TAU0 364 aa17.9■□□□□ 0.46
SMPDL3A-201ENST00000368440 KIAA1683Q9H0B3 1180 aa17.9■□□□□ 0.46
SMPDL3A-201ENST00000368440 ZNF287Q9HBT7 754 aa17.9■□□□□ 0.46
SMPDL3A-201ENST00000368440 IGKV6D-41A0A0C4DH26 115 aa17.9■□□□□ 0.46
SMPDL3A-201ENST00000368440 C19orf81C9J6K1 198 aa17.9■□□□□ 0.46
SMPDL3A-201ENST00000368440 GPR25O00155 361 aa17.9■□□□□ 0.46
SMPDL3A-201ENST00000368440 CYP2C8P10632 490 aa17.9■□□□□ 0.46
SMPDL3A-201ENST00000368440 ZFYVE28Q9HCC9 887 aa17.9■□□□□ 0.46
SMPDL3A-201ENST00000368440 PLIN4Q96Q06 1357 aa17.89■□□□□ 0.46
SMPDL3A-201ENST00000368440 CDC45O75419 566 aa17.89■□□□□ 0.45
SMPDL3A-201ENST00000368440 FGRP09769 529 aa17.89■□□□□ 0.45
SMPDL3A-201ENST00000368440 EEF2P13639 858 aaKnown RBP17.89■□□□□ 0.45
SMPDL3A-201ENST00000368440 TFAP4Q01664 338 aa17.89■□□□□ 0.45
SMPDL3A-201ENST00000368440 KIAA1755Q5JYT7 1200 aa17.89■□□□□ 0.45
SMPDL3A-201ENST00000368440 USP17L2Q6R6M4 530 aa17.89■□□□□ 0.45
SMPDL3A-201ENST00000368440 PRDM10Q9NQV6 1147 aa17.89■□□□□ 0.45
SMPDL3A-201ENST00000368440 TMOD4Q9NZQ9 345 aa17.89■□□□□ 0.45
SMPDL3A-201ENST00000368440 ADGRA2Q96PE1 1338 aa17.89■□□□□ 0.45
SMPDL3A-201ENST00000368440 ZNF213O14771 459 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 ORC4O43929 436 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 ATP2B2Q01814 1243 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 ZNF296Q8WUU4 475 aaPredicted RBP17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 C12orf42Q96LP6 360 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 KANSL2Q9H9L4 492 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 NEDD4P46934 1319 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 TSPY3P0CV98 308 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 TSPY8P0CW00 308 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 RRP12Q5JTH9 1297 aaKnown RBP17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 AKNAD1Q5T1N1 836 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 NEDD1Q8NHV4 660 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 STAG1Q8WVM7 1258 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 CEP95Q96GE4 821 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 ARHGEF10LQ9HCE6 1279 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 TOMM22Q9NS69 142 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 SLC45A1Q9Y2W3 748 aa17.88■□□□□ 0.45
SMPDL3A-201ENST00000368440 RANBP6O60518 1105 aaKnown RBP17.87■□□□□ 0.45
SMPDL3A-201ENST00000368440 TLR2O60603 784 aa17.87■□□□□ 0.45
SMPDL3A-201ENST00000368440 COL13A1Q5TAT6 717 aaPredicted RBP17.87■□□□□ 0.45
SMPDL3A-201ENST00000368440 PARK7Q99497 189 aaKnown RBP17.87■□□□□ 0.45
SMPDL3A-201ENST00000368440 LSG1Q9H089 658 aaKnown RBP17.87■□□□□ 0.45
SMPDL3A-201ENST00000368440 TMX2Q9Y320 296 aa17.87■□□□□ 0.45
SMPDL3A-201ENST00000368440 PARP14Q460N5 1801 aa17.87■□□□□ 0.45
SMPDL3A-201ENST00000368440 TSPY2A6NKD2 308 aa17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 NMT2O60551 498 aa17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 VCAM1P19320 739 aa17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 USP14P54578 494 aa17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 IMMTQ16891 758 aaKnown RBP17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 NOM1Q5C9Z4 860 aaKnown RBP17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 ASCC2Q9H1I8 757 aaPredicted RBP17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 CPA4Q9UI42 421 aa17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 CTNNA3Q9UI47 895 aa17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 TAF6LQ9Y6J9 622 aa17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 MFSD6Q6ZSS7 791 aa17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 MAP4K1Q92918 833 aa17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 IL17RBQ9NRM6 502 aa17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 MTMR4Q9NYA4 1195 aa17.86■□□□□ 0.45
SMPDL3A-201ENST00000368440 RLFQ13129 1914 aa17.85■□□□□ 0.45
SMPDL3A-201ENST00000368440 CYP21A2P08686 494 aa17.85■□□□□ 0.45
SMPDL3A-201ENST00000368440 CAP1Q01518 475 aa17.85■□□□□ 0.45
SMPDL3A-201ENST00000368440 C17orf99Q6UX52 265 aa17.85■□□□□ 0.45
SMPDL3A-201ENST00000368440 SPICE1Q8N0Z3 855 aa17.85■□□□□ 0.45
SMPDL3A-201ENST00000368440 VCPKMTQ9H867 229 aa17.85■□□□□ 0.45
SMPDL3A-201ENST00000368440 NYAP2Q9P242 653 aa17.85■□□□□ 0.45
SMPDL3A-201ENST00000368440 RBM8AQ9Y5S9 174 aaKnown RBP17.85■□□□□ 0.45
SMPDL3A-201ENST00000368440 U3KPZ7 1027 aaPredicted RBP17.85■□□□□ 0.45
SMPDL3A-201ENST00000368440 FKTNO75072 461 aa17.84■□□□□ 0.45
SMPDL3A-201ENST00000368440 HOXA7P31268 230 aaPredicted RBP17.84■□□□□ 0.45
SMPDL3A-201ENST00000368440 SH2D4AQ9H788 454 aa17.84■□□□□ 0.45
SMPDL3A-201ENST00000368440 ANO2Q9NQ90 1003 aa17.84■□□□□ 0.45
SMPDL3A-201ENST00000368440 CLIP2Q9UDT6 1046 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms