RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 FOXN1O15353 648 aa22.16■■□□□ 1.14
LMNA-204ENST00000368298 BACE1P56817 501 aa22.16■■□□□ 1.14
LMNA-204ENST00000368298 IMMTQ16891 758 aaKnown RBP22.16■■□□□ 1.14
LMNA-204ENST00000368298 COL13A1Q5TAT6 717 aaPredicted RBP22.16■■□□□ 1.14
LMNA-204ENST00000368298 OTUD7BQ6GQQ9 843 aa22.16■■□□□ 1.14
LMNA-204ENST00000368298 STK11IPQ8N1F8 1099 aa22.16■■□□□ 1.14
LMNA-204ENST00000368298 STAG1Q8WVM7 1258 aa22.16■■□□□ 1.14
LMNA-204ENST00000368298 KANSL2Q9H9L4 492 aa22.16■■□□□ 1.14
LMNA-204ENST00000368298 U3KPZ7 1027 aaPredicted RBP22.16■■□□□ 1.14
LMNA-204ENST00000368298 PLIN4Q96Q06 1357 aa22.16■■□□□ 1.14
LMNA-204ENST00000368298 PRDM1O75626 825 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 NT5C2P49902 561 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 AKNAD1Q5T1N1 836 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 KIAA1211Q6ZU35 1233 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 ANKRD23Q86SG2 305 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 SIAH1Q8IUQ4 282 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 PROCA1Q8NCQ7 364 aaPredicted RBP22.15■■□□□ 1.14
LMNA-204ENST00000368298 LSG1Q9H089 658 aaKnown RBP22.15■■□□□ 1.14
LMNA-204ENST00000368298 KIAA1683Q9H0B3 1180 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 LOC285556D6RIA3 1793 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 IGKV6D-41A0A0C4DH26 115 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 BTBD19C9JJ37 291 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 HAND2P61296 217 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 GPAT2Q6NUI2 795 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 NEDD1Q8NHV4 660 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 RNF41Q9H4P4 317 aaPredicted RBP22.15■■□□□ 1.14
LMNA-204ENST00000368298 INCENPQ9NQS7 918 aa22.15■■□□□ 1.14
LMNA-204ENST00000368298 MTMR2Q13614 643 aa22.14■■□□□ 1.13
LMNA-204ENST00000368298 MFSD6Q6ZSS7 791 aa22.14■■□□□ 1.13
LMNA-204ENST00000368298 TBC1D10CQ8IV04 446 aa22.14■■□□□ 1.13
LMNA-204ENST00000368298 FAM43AQ8N2R8 423 aa22.14■■□□□ 1.13
LMNA-204ENST00000368298 SLC45A1Q9Y2W3 748 aa22.14■■□□□ 1.13
LMNA-204ENST00000368298 HMGCS2P54868 508 aa22.13■■□□□ 1.13
LMNA-204ENST00000368298 C12orf42Q96LP6 360 aa22.13■■□□□ 1.13
LMNA-204ENST00000368298 A0A1W2PRG0 241 aa22.12■■□□□ 1.13
LMNA-204ENST00000368298 TRPA1O75762 1119 aa22.12■■□□□ 1.13
LMNA-204ENST00000368298 TFAP4Q01664 338 aa22.12■■□□□ 1.13
LMNA-204ENST00000368298 ICA1Q05084 483 aa22.12■■□□□ 1.13
LMNA-204ENST00000368298 ACER1Q8TDN7 264 aa22.12■■□□□ 1.13
LMNA-204ENST00000368298 NYAP2Q9P242 653 aa22.12■■□□□ 1.13
LMNA-204ENST00000368298 AGTPBP1Q9UPW5 1226 aa22.12■■□□□ 1.13
LMNA-204ENST00000368298 TMX2Q9Y320 296 aa22.12■■□□□ 1.13
LMNA-204ENST00000368298 CYP21A2P08686 494 aa22.11■■□□□ 1.13
LMNA-204ENST00000368298 TSPY3P0CV98 308 aa22.11■■□□□ 1.13
LMNA-204ENST00000368298 TSPY8P0CW00 308 aa22.11■■□□□ 1.13
LMNA-204ENST00000368298 USP14P54578 494 aa22.11■■□□□ 1.13
LMNA-204ENST00000368298 USP17L2Q6R6M4 530 aa22.11■■□□□ 1.13
LMNA-204ENST00000368298 BACH2Q9BYV9 841 aa22.11■■□□□ 1.13
LMNA-204ENST00000368298 EMILIN3Q9NT22 766 aa22.11■■□□□ 1.13
LMNA-204ENST00000368298 RBM8AQ9Y5S9 174 aaKnown RBP22.11■■□□□ 1.13
LMNA-204ENST00000368298 EEF2P13639 858 aaKnown RBP22.1■■□□□ 1.13
LMNA-204ENST00000368298 NOVP48745 357 aa22.1■■□□□ 1.13
LMNA-204ENST00000368298 NOM1Q5C9Z4 860 aaKnown RBP22.1■■□□□ 1.13
LMNA-204ENST00000368298 FAM47AQ5JRC9 791 aa22.1■■□□□ 1.13
LMNA-204ENST00000368298 SH2D4AQ9H788 454 aa22.1■■□□□ 1.13
LMNA-204ENST00000368298 ARHGEF10LQ9HCE6 1279 aa22.1■■□□□ 1.13
LMNA-204ENST00000368298 ANO2Q9NQ90 1003 aa22.1■■□□□ 1.13
LMNA-204ENST00000368298 TCP11L1Q9NUJ3 509 aa22.1■■□□□ 1.13
LMNA-204ENST00000368298 MTMR4Q9NYA4 1195 aa22.1■■□□□ 1.13
LMNA-204ENST00000368298 TMOD4Q9NZQ9 345 aa22.1■■□□□ 1.13
LMNA-204ENST00000368298 SYNPO2Q9UMS6 1093 aa22.1■■□□□ 1.13
LMNA-204ENST00000368298 TSPY2A6NKD2 308 aa22.09■■□□□ 1.13
LMNA-204ENST00000368298 PDHXO00330 501 aa22.09■■□□□ 1.13
LMNA-204ENST00000368298 RANBP6O60518 1105 aaKnown RBP22.09■■□□□ 1.13
LMNA-204ENST00000368298 NECTIN1Q15223 517 aa22.09■■□□□ 1.13
LMNA-204ENST00000368298 GADL1Q6ZQY3 521 aa22.09■■□□□ 1.13
LMNA-204ENST00000368298 CLEC10AQ8IUN9 316 aa22.09■■□□□ 1.13
LMNA-204ENST00000368298 MKL1Q969V6 931 aa22.09■■□□□ 1.13
LMNA-204ENST00000368298 FEZ1Q99689 392 aa22.09■■□□□ 1.13
LMNA-204ENST00000368298 HOXA7P31268 230 aaPredicted RBP22.09■■□□□ 1.13
LMNA-204ENST00000368298 PPP4R3BQ5MIZ7 849 aa22.09■■□□□ 1.13
LMNA-204ENST00000368298 ESR2Q92731 530 aa22.09■■□□□ 1.13
LMNA-204ENST00000368298 CEP95Q96GE4 821 aa22.09■■□□□ 1.13
LMNA-204ENST00000368298 CNNM2Q9H8M5 875 aa22.09■■□□□ 1.13
LMNA-204ENST00000368298 IL17RBQ9NRM6 502 aa22.09■■□□□ 1.13
LMNA-204ENST00000368298 NEDD4P46934 1319 aa22.08■■□□□ 1.13
LMNA-204ENST00000368298 EPB41L2O43491 1005 aaKnown RBP22.08■■□□□ 1.12
LMNA-204ENST00000368298 CTCFP49711 727 aaPredicted RBP22.08■■□□□ 1.12
LMNA-204ENST00000368298 DGKZQ13574 1117 aa22.08■■□□□ 1.12
LMNA-204ENST00000368298 TREML2Q5T2D2 321 aa22.08■■□□□ 1.12
LMNA-204ENST00000368298 TOMM22Q9NS69 142 aa22.08■■□□□ 1.12
LMNA-204ENST00000368298 TTLL1O95922 423 aa22.07■■□□□ 1.12
LMNA-204ENST00000368298 HSPA8P11142 646 aaKnown RBP22.07■■□□□ 1.12
LMNA-204ENST00000368298 PABPC4Q13310 644 aaKnown RBP eCLIP22.07■■□□□ 1.121e-11■□□□□ 10
LMNA-204ENST00000368298 CRHR2Q13324 411 aa22.07■■□□□ 1.12
LMNA-204ENST00000368298 TAF1CQ15572 869 aaPredicted RBP22.07■■□□□ 1.12
LMNA-204ENST00000368298 LPAR1Q92633 364 aa22.07■■□□□ 1.12
LMNA-204ENST00000368298 KRT23Q9C075 422 aa22.07■■□□□ 1.12
LMNA-204ENST00000368298 VCPKMTQ9H867 229 aa22.07■■□□□ 1.12
LMNA-204ENST00000368298 ZFYVE28Q9HCC9 887 aa22.07■■□□□ 1.12
LMNA-204ENST00000368298 TBC1D8O95759 1140 aa22.06■■□□□ 1.12
LMNA-204ENST00000368298 RRP12Q5JTH9 1297 aaKnown RBP22.06■■□□□ 1.12
LMNA-204ENST00000368298 IFFO2Q5TF58 517 aa22.06■■□□□ 1.12
LMNA-204ENST00000368298 NKX2-3Q8TAU0 364 aa22.06■■□□□ 1.12
LMNA-204ENST00000368298 R3HDMLQ9H3Y0 253 aa22.06■■□□□ 1.12
LMNA-204ENST00000368298 MYH4Q9Y623 1939 aa22.05■■□□□ 1.12
LMNA-204ENST00000368298 TLR2O60603 784 aa22.05■■□□□ 1.12
LMNA-204ENST00000368298 REC8O95072 547 aa22.05■■□□□ 1.12
LMNA-204ENST00000368298 LBX1P52954 281 aa22.05■■□□□ 1.12
LMNA-204ENST00000368298 CLIP2Q9UDT6 1046 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms