RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 CNBD1Q8NA66 436 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 OSBP2Q969R2 916 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 NLRC4Q9NPP4 1024 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 ATP6V0A2Q9Y487 856 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 IKBKGQ9Y6K9 419 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 MYO5CQ9NQX4 1742 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 EFCAB8A8MWE9 144 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 SND1Q7KZF4 910 aaKnown RBP eCLIP12.8□□□□□ -0.36
RD3-201ENST00000367002 UBLCP1Q8WVY7 318 aaPredicted RBP12.8□□□□□ -0.36
RD3-201ENST00000367002 GOLGA6BA6NDN3 693 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 STX10O60499 249 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 VWA3BQ502W6 1294 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 SPATA1Q5VX52 437 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 CCDC114Q96M63 670 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 NSRP1Q9H0G5 558 aaKnown RBP12.8□□□□□ -0.36
RD3-201ENST00000367002 MTRF1LQ9UGC7 380 aaKnown RBP12.8□□□□□ -0.36
RD3-201ENST00000367002 RESTQ13127 1097 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 PTGDRQ13258 359 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 TTC31Q49AM3 519 aaPredicted RBP12.8□□□□□ -0.36
RD3-201ENST00000367002 CEP57Q86XR8 500 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 C2CD5Q86YS7 1000 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 REXO1Q8N1G1 1221 aaKnown RBP12.8□□□□□ -0.36
RD3-201ENST00000367002 ANKS4BQ8N8V4 417 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 HOMER2Q9NSB8 354 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 TBC1D7Q9P0N9 293 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 ZBTB21Q9ULJ3 1066 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 CDK12Q9NYV4 1490 aaPredicted RBP12.8□□□□□ -0.36
RD3-201ENST00000367002 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
RD3-201ENST00000367002 CPSF1Q10570 1443 aaKnown RBP12.8□□□□□ -0.36
RD3-201ENST00000367002 EEF2P13639 858 aaKnown RBP12.79□□□□□ -0.36
RD3-201ENST00000367002 PTPN21Q16825 1174 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 RRAGAQ7L523 313 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 TMEM87AQ8NBN3 555 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 CCDC26Q8TAB7 109 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 ZSCAN10Q96SZ4 725 aaPredicted RBP12.79□□□□□ -0.36
RD3-201ENST00000367002 IFIH1Q9BYX4 1025 aaKnown RBP12.79□□□□□ -0.36
RD3-201ENST00000367002 KCNJ18B7U540 433 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 EPB41P11171 864 aaKnown RBP12.79□□□□□ -0.36
RD3-201ENST00000367002 KIF23Q02241 960 aaPredicted RBP12.79□□□□□ -0.36
RD3-201ENST00000367002 KCNJ12Q14500 433 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 BRD3Q15059 726 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 TYW1BQ6NUM6 668 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 NELFCDQ8IXH7 590 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 FBF1Q8TES7 1133 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 TGFBRAP1Q8WUH2 860 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 CALCOCO2Q13137 446 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 TRAPPC3LQ5T215 181 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 HAUS3Q68CZ6 603 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 BLIDQ8IZY5 108 aa12.79□□□□□ -0.36
RD3-201ENST00000367002 NAP1L4Q99733 375 aaKnown RBP12.79□□□□□ -0.36
RD3-201ENST00000367002 STMN4Q9H169 189 aaPredicted RBP12.79□□□□□ -0.36
RD3-201ENST00000367002 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
RD3-201ENST00000367002 CEP104O60308 925 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 KLHL30Q0D2K2 578 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 MORC3Q14149 939 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 CALCRLQ16602 461 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 IFT20Q8IY31 132 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 SYNCQ9H7C4 482 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 VEZTQ9HBM0 779 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 FRMD4BQ9Y2L6 1034 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 SMCO2A6NFE2 343 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 GOLGA8FQ08AF8 430 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 GOLGA8DPQ0D2H9 430 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 INF2Q27J81 1249 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 NBPF14Q5TI25 921 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 CLEC17AQ6ZS10 378 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 GSTA5Q7RTV2 222 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 PNMA1Q8ND90 353 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 PPP1R13BQ96KQ4 1090 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 IMPG2Q9BZV3 1241 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 TRIM31Q9BZY9 425 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 MTUS1Q9ULD2 1270 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 IKBKBO14920 756 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 CIAO1O76071 339 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 PPARDQ03181 441 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 DDX12PQ92771 950 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 PDLIM2Q96JY6 352 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 MLH3Q9UHC1 1453 aa12.78□□□□□ -0.36
RD3-201ENST00000367002 H7C1D1 291 aa12.77□□□□□ -0.36
RD3-201ENST00000367002 PPP6R2O75170 966 aa12.77□□□□□ -0.36
RD3-201ENST00000367002 SCG2P13521 617 aa12.77□□□□□ -0.36
RD3-201ENST00000367002 CDC25BP30305 580 aa12.77□□□□□ -0.36
RD3-201ENST00000367002 DNM2P50570 870 aa12.77□□□□□ -0.36
RD3-201ENST00000367002 ADCY7P51828 1080 aa12.77□□□□□ -0.36
RD3-201ENST00000367002 ZSCAN26Q16670 478 aa12.77□□□□□ -0.36
RD3-201ENST00000367002 KLHL7Q8IXQ5 586 aa12.77□□□□□ -0.36
RD3-201ENST00000367002 AIFM3Q96NN9 605 aa12.77□□□□□ -0.36
RD3-201ENST00000367002 LZTS2Q9BRK4 669 aa12.77□□□□□ -0.36
RD3-201ENST00000367002 PUS7LQ9H0K6 701 aaKnown RBP12.77□□□□□ -0.36
RD3-201ENST00000367002 ASAP1Q9ULH1 1129 aa12.77□□□□□ -0.36
RD3-201ENST00000367002 M0R2C6 588 aa12.77□□□□□ -0.37
RD3-201ENST00000367002 CHMP2AO43633 222 aa12.77□□□□□ -0.37
RD3-201ENST00000367002 TNFAIP3P21580 790 aa12.77□□□□□ -0.37
RD3-201ENST00000367002 SLC1A4P43007 532 aa12.77□□□□□ -0.37
RD3-201ENST00000367002 ASIC2Q16515 512 aa12.77□□□□□ -0.37
RD3-201ENST00000367002 CCDC50Q8IVM0 306 aa12.77□□□□□ -0.37
RD3-201ENST00000367002 SYMPKQ92797 1274 aaKnown RBP12.77□□□□□ -0.37
RD3-201ENST00000367002 CDCA7Q9BWT1 371 aaPredicted RBP12.77□□□□□ -0.37
RD3-201ENST00000367002 HAUS4Q9H6D7 363 aa12.77□□□□□ -0.37
RD3-201ENST00000367002 PKD2L1Q9P0L9 805 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms