RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 USP17L17D6RBQ6 530 aa21.14■□□□□ 0.97
COL9A1-203ENST00000360859 USP17L19D6RCP7 530 aa21.14■□□□□ 0.97
COL9A1-203ENST00000360859 USP17L20D6RJB6 530 aa21.14■□□□□ 0.97
COL9A1-203ENST00000360859 RGS2P41220 211 aa21.14■□□□□ 0.97
COL9A1-203ENST00000360859 CACNB2Q08289 660 aaPredicted RBP21.14■□□□□ 0.97
COL9A1-203ENST00000360859 USP17L24Q0WX57 530 aa21.14■□□□□ 0.97
COL9A1-203ENST00000360859 CCL14Q16627 93 aa21.14■□□□□ 0.97
COL9A1-203ENST00000360859 ABCB5Q2M3G0 1257 aa21.14■□□□□ 0.97
COL9A1-203ENST00000360859 CERKLQ49MI3 558 aaPredicted RBP21.14■□□□□ 0.97
COL9A1-203ENST00000360859 RIOK1Q9BRS2 568 aaKnown RBP21.14■□□□□ 0.97
COL9A1-203ENST00000360859 KIAA1683Q9H0B3 1180 aa21.14■□□□□ 0.97
COL9A1-203ENST00000360859 ZMYND8Q9ULU4 1186 aaPredicted RBP21.14■□□□□ 0.97
COL9A1-203ENST00000360859 RABGAP1Q9Y3P9 1069 aa21.14■□□□□ 0.97
COL9A1-203ENST00000360859 DDX60LQ5H9U9 1706 aaKnown RBP21.14■□□□□ 0.97
COL9A1-203ENST00000360859 SOX1O00570 391 aaPredicted RBP21.13■□□□□ 0.97
COL9A1-203ENST00000360859 CNMDO75829 334 aa21.13■□□□□ 0.97
COL9A1-203ENST00000360859 PLCD1P51178 756 aa21.13■□□□□ 0.97
COL9A1-203ENST00000360859 USP14P54578 494 aa21.13■□□□□ 0.97
COL9A1-203ENST00000360859 ACER1Q8TDN7 264 aa21.13■□□□□ 0.97
COL9A1-203ENST00000360859 PANK1Q8TE04 598 aa21.13■□□□□ 0.97
COL9A1-203ENST00000360859 APBA2Q99767 749 aa21.13■□□□□ 0.97
COL9A1-203ENST00000360859 GDF15Q99988 308 aa21.13■□□□□ 0.97
COL9A1-203ENST00000360859 BMP8BP34820 402 aa21.12■□□□□ 0.97
COL9A1-203ENST00000360859 SHMT1P34896 483 aa21.12■□□□□ 0.97
COL9A1-203ENST00000360859 CATSPERGQ6ZRH7 1159 aa21.12■□□□□ 0.97
COL9A1-203ENST00000360859 IL1RAPL2Q9NP60 686 aa21.12■□□□□ 0.97
COL9A1-203ENST00000360859 PFASO15067 1338 aa21.11■□□□□ 0.97
COL9A1-203ENST00000360859 MAGEB6P1A0A0J9YX57 407 aa21.11■□□□□ 0.97
COL9A1-203ENST00000360859 VCAM1P19320 739 aa21.11■□□□□ 0.97
COL9A1-203ENST00000360859 CCND3P30281 292 aaPredicted RBP21.11■□□□□ 0.97
COL9A1-203ENST00000360859 CCNA1P78396 465 aa21.11■□□□□ 0.97
COL9A1-203ENST00000360859 MAP2K5Q13163 448 aa21.11■□□□□ 0.97
COL9A1-203ENST00000360859 LRCH3Q96II8 777 aa21.11■□□□□ 0.97
COL9A1-203ENST00000360859 CWC22Q9HCG8 908 aaKnown RBP21.11■□□□□ 0.97
COL9A1-203ENST00000360859 CABP5Q9NP86 173 aa21.11■□□□□ 0.97
COL9A1-203ENST00000360859 POLR3DP05423 398 aaPredicted RBP21.1■□□□□ 0.97
COL9A1-203ENST00000360859 SYN1P17600 705 aa21.1■□□□□ 0.97
COL9A1-203ENST00000360859 GUCY1A2P33402 732 aa21.1■□□□□ 0.97
COL9A1-203ENST00000360859 TTF1Q15361 905 aaPredicted RBP21.1■□□□□ 0.97
COL9A1-203ENST00000360859 HSP90AB4PQ58FF6 505 aa21.1■□□□□ 0.97
COL9A1-203ENST00000360859 LHX8Q68G74 356 aa21.1■□□□□ 0.97
COL9A1-203ENST00000360859 RHPN1Q8TCX5 695 aa21.1■□□□□ 0.97
COL9A1-203ENST00000360859 GLRX3O76003 335 aaKnown RBP21.09■□□□□ 0.97
COL9A1-203ENST00000360859 COL6A1P12109 1028 aa21.09■□□□□ 0.97
COL9A1-203ENST00000360859 PDE6AP16499 860 aa21.09■□□□□ 0.97
COL9A1-203ENST00000360859 GABPAQ06546 454 aa21.09■□□□□ 0.97
COL9A1-203ENST00000360859 SLC9C2Q5TAH2 1124 aa21.09■□□□□ 0.97
COL9A1-203ENST00000360859 LBX2Q6XYB7 198 aa21.09■□□□□ 0.97
COL9A1-203ENST00000360859 MIER1Q8N108 512 aa21.09■□□□□ 0.97
COL9A1-203ENST00000360859 EDC3Q96F86 508 aaKnown RBP21.09■□□□□ 0.97
COL9A1-203ENST00000360859 BTBD7Q9P203 1132 aa21.09■□□□□ 0.97
COL9A1-203ENST00000360859 SLC15A5A6NIM6 579 aa21.08■□□□□ 0.97
COL9A1-203ENST00000360859 EVX2Q03828 476 aa21.08■□□□□ 0.97
COL9A1-203ENST00000360859 SEPT2Q15019 361 aa21.08■□□□□ 0.97
COL9A1-203ENST00000360859 WDR78Q5VTH9 848 aa21.08■□□□□ 0.97
COL9A1-203ENST00000360859 CRNKL1Q9BZJ0 848 aaKnown RBP21.08■□□□□ 0.97
COL9A1-203ENST00000360859 RPAP3Q9H6T3 665 aaPredicted RBP21.08■□□□□ 0.97
COL9A1-203ENST00000360859 PTPREP23469 700 aa21.07■□□□□ 0.96
COL9A1-203ENST00000360859 MAGEA10P43363 369 aaPredicted RBP21.07■□□□□ 0.96
COL9A1-203ENST00000360859 MCM9Q9NXL9 1143 aa21.07■□□□□ 0.96
COL9A1-203ENST00000360859 FLRT1Q9NZU1 646 aa21.07■□□□□ 0.96
COL9A1-203ENST00000360859 ZNF532Q9HCE3 1301 aa21.06■□□□□ 0.96
COL9A1-203ENST00000360859 SPDYE16A6NNV3 312 aaPredicted RBP21.06■□□□□ 0.96
COL9A1-203ENST00000360859 APBB1O00213 710 aa21.06■□□□□ 0.96
COL9A1-203ENST00000360859 GOLIM4O00461 696 aa21.06■□□□□ 0.96
COL9A1-203ENST00000360859 MFSD14CQ5VZR4 134 aa21.06■□□□□ 0.96
COL9A1-203ENST00000360859 CLASRPQ8N2M8 674 aaKnown RBP21.06■□□□□ 0.96
COL9A1-203ENST00000360859 NAV1Q8NEY1 1877 aa21.05■□□□□ 0.96
COL9A1-203ENST00000360859 LAMA3Q16787 3333 aa21.05■□□□□ 0.96
COL9A1-203ENST00000360859 A0A1W2PRG0 241 aa21.05■□□□□ 0.96
COL9A1-203ENST00000360859 TCRBV5S4A2TA0A5A2 114 aa21.05■□□□□ 0.96
COL9A1-203ENST00000360859 HOXC6P09630 235 aa21.05■□□□□ 0.96
COL9A1-203ENST00000360859 GRB14Q14449 540 aa21.05■□□□□ 0.96
COL9A1-203ENST00000360859 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.05■□□□□ 0.96
COL9A1-203ENST00000360859 SDR42E1Q8WUS8 393 aa21.05■□□□□ 0.96
COL9A1-203ENST00000360859 KIF1BPQ96EK5 621 aa21.05■□□□□ 0.96
COL9A1-203ENST00000360859 DNAJC2Q99543 621 aaKnown RBP21.05■□□□□ 0.96
COL9A1-203ENST00000360859 IVNS1ABPQ9Y6Y0 642 aa21.05■□□□□ 0.96
COL9A1-203ENST00000360859 MPHOSPH10O00566 681 aaKnown RBP21.04■□□□□ 0.96
COL9A1-203ENST00000360859 IFIT2P09913 472 aaKnown RBP21.04■□□□□ 0.96
COL9A1-203ENST00000360859 CYP2D6P10635 497 aa21.04■□□□□ 0.96
COL9A1-203ENST00000360859 LRRC26Q2I0M4 334 aa21.04■□□□□ 0.96
COL9A1-203ENST00000360859 LCORLQ8N3X6 602 aa21.04■□□□□ 0.96
COL9A1-203ENST00000360859 DCP1AQ9NPI6 582 aaPredicted RBP21.04■□□□□ 0.96
COL9A1-203ENST00000360859 ZBED9Q6R2W3 1325 aa21.04■□□□□ 0.96
COL9A1-203ENST00000360859 ATP2B2Q01814 1243 aa21.03■□□□□ 0.96
COL9A1-203ENST00000360859 COG2Q14746 738 aa21.03■□□□□ 0.96
COL9A1-203ENST00000360859 SIRT2Q8IXJ6 389 aa21.03■□□□□ 0.96
COL9A1-203ENST00000360859 RPAP2Q8IXW5 612 aaPredicted RBP21.03■□□□□ 0.96
COL9A1-203ENST00000360859 SLC44A5Q8NCS7 719 aa21.03■□□□□ 0.96
COL9A1-203ENST00000360859 NPLOC4Q8TAT6 608 aa21.03■□□□□ 0.96
COL9A1-203ENST00000360859 MS4A1P11836 297 aa21.02■□□□□ 0.96
COL9A1-203ENST00000360859 TDHQ8IZJ6 230 aa21.02■□□□□ 0.96
COL9A1-203ENST00000360859 TANGO6Q9C0B7 1094 aa21.02■□□□□ 0.96
COL9A1-203ENST00000360859 UBE2OQ9C0C9 1292 aaKnown RBP21.02■□□□□ 0.96
COL9A1-203ENST00000360859 BCL11AQ9H165 835 aa21.02■□□□□ 0.96
COL9A1-203ENST00000360859 HOXC10Q9NYD6 342 aa21.02■□□□□ 0.96
COL9A1-203ENST00000360859 DDX20Q9UHI6 824 aaKnown RBP21.02■□□□□ 0.96
COL9A1-203ENST00000360859 HMMRO75330 724 aa21.01■□□□□ 0.95
COL9A1-203ENST00000360859 CNGA1P29973 690 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms