RNA–Protein interactions for RNA: ENST00000359001.9

KCNIP4-201, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-201ENST00000359001 VPS54Q9P1Q0 977 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 SERTAD1Q9UHV2 236 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 TAOK2Q9UL54 1235 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 CEP131Q9UPN4 1083 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 CDK5RAP2Q96SN8 1893 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 USP17L12C9JPN9 530 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 USP17L21D6R901 530 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 WNT7AO00755 349 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 POLR2DO15514 142 aaKnown RBP8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 PRDM1O75626 825 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 CALM1P0DP23 149 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 CALM2P0DP24 149 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 CALM3P0DP25 149 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 SFPQP23246 707 aaKnown RBP eCLIP8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 KRT2P35908 639 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 FAM98CQ17RN3 349 aaKnown RBP8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 SBK1Q52WX2 424 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 USP49Q70CQ1 688 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 SH3RF1Q7Z6J0 888 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 CATIPQ7Z7H3 387 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 IQCA1Q86XH1 822 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 VSTM4Q8IW00 320 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 MED15Q96RN5 788 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 CCDC94Q9BW85 323 aaPredicted RBP8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 TMX1Q9H3N1 280 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 CABP5Q9NP86 173 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 ATP8A2Q9NTI2 1148 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 SRP68Q9UHB9 627 aaKnown RBP8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 A0A087X0B3 334 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 CBFA2T2O43439 604 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 PRDX5P30044 214 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 HIBADHP31937 336 aaKnown RBP8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 FMR1Q06787 632 aaKnown RBP eCLIP8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 PTPN14Q15678 1187 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 OLFM4Q6UX06 510 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 BICDL1Q6ZP65 573 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 AMIGO3Q86WK7 504 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 CCDC112Q8NEF3 446 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 PPP1R13BQ96KQ4 1090 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 NLRP3Q96P20 1036 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 ANKRD2Q9GZV1 360 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 CSRNP2Q9H175 543 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 FANCLQ9NW38 375 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 MKRN1Q9UHC7 482 aaKnown RBP8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 HOOK1Q9UJC3 728 aaKnown RBP8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 ROBO3Q96MS0 1386 aa8.08□□□□□ -1.12
KCNIP4-201ENST00000359001 TRIM75PA6NK02 468 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 KIF2AO00139 706 aaPredicted RBP8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 IGSF3O75054 1194 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 XBP1P17861 261 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 UBASH3AP57075 661 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 TBX2Q13207 712 aaPredicted RBP8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 GLIPR1L2Q4G1C9 344 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 RCSD1Q6JBY9 416 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 TXNRD3Q86VQ6 643 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 TMEM139Q8IV31 216 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 SRBD1Q8N5C6 995 aaKnown RBP8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 MLKLQ8NB16 471 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 ENOX1Q8TC92 643 aaKnown RBP8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 CRNKL1Q9BZJ0 848 aaKnown RBP8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 ARPP21Q9UBL0 812 aaPredicted RBP8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 TMEM232C9JQI7 657 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 BMP15O95972 392 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 AKAP17AQ02040 695 aaKnown RBP8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 NOM1Q5C9Z4 860 aaKnown RBP8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 KANK3Q6NY19 840 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 NBPF5PQ86XG9 351 aaPredicted RBP8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 GRAMD1CQ8IYS0 662 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 SMARCE1Q969G3 411 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 SETDB2Q96T68 719 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 TRMT1Q9NXH9 659 aaKnown RBP8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 TFCP2L1Q9NZI6 479 aa8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 V9GY48 417 aaPredicted RBP8.07□□□□□ -1.12
KCNIP4-201ENST00000359001 hCG_1642624A0A1W2PR95 340 aa8.06□□□□□ -1.12
KCNIP4-201ENST00000359001 NMT2O60551 498 aa8.06□□□□□ -1.12
KCNIP4-201ENST00000359001 SERPINC1P01008 464 aa8.06□□□□□ -1.12
KCNIP4-201ENST00000359001 CYP2D6P10635 497 aa8.06□□□□□ -1.12
KCNIP4-201ENST00000359001 GTF2E1P29083 439 aaPredicted RBP8.06□□□□□ -1.12
KCNIP4-201ENST00000359001 NT5C2P49902 561 aa8.06□□□□□ -1.12
KCNIP4-201ENST00000359001 ATP2C1P98194 919 aaPredicted RBP8.06□□□□□ -1.12
KCNIP4-201ENST00000359001 ZNF827Q17R98 1081 aa8.06□□□□□ -1.12
KCNIP4-201ENST00000359001 CT47A1Q5JQC4 288 aaPredicted RBP8.06□□□□□ -1.12
KCNIP4-201ENST00000359001 FERMT2Q96AC1 680 aa8.06□□□□□ -1.12
KCNIP4-201ENST00000359001 L2HGDHQ9H9P8 463 aa8.06□□□□□ -1.12
KCNIP4-201ENST00000359001 DACH1Q9UI36 760 aa8.06□□□□□ -1.12
KCNIP4-201ENST00000359001 GNPATO15228 680 aa8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 SLFN14P0C7P3 912 aa8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 SCG2P13521 617 aa8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 ERCC5P28715 1186 aaPredicted RBP8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 PLCD1P51178 756 aa8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 PFKFB3Q16875 520 aaPredicted RBP8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 CFAP100Q494V2 611 aa8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 APTXQ7Z2E3 356 aaKnown RBP8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 FCHSD1Q86WN1 690 aa8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 PDCL2Q8N4E4 241 aa8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 ANKS1AQ92625 1134 aa8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 SYMPKQ92797 1274 aaKnown RBP8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 EPSTI1Q96J88 318 aa8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 NFE2L3Q9Y4A8 694 aa8.05□□□□□ -1.12
KCNIP4-201ENST00000359001 UBR3Q6ZT12 1888 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms