RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 TPM3P06753 285 aa18.36■□□□□ 0.53
PTPN5-201ENST00000358540 VEGFAP15692 232 aaPredicted RBP18.36■□□□□ 0.53
PTPN5-201ENST00000358540 FUT2Q10981 343 aa18.36■□□□□ 0.53
PTPN5-201ENST00000358540 CCDC144BQ3MJ40 725 aa18.36■□□□□ 0.53
PTPN5-201ENST00000358540 ARPP21Q9UBL0 812 aaPredicted RBP18.36■□□□□ 0.53
PTPN5-201ENST00000358540 FOXN1O15353 648 aa18.36■□□□□ 0.53
PTPN5-201ENST00000358540 FGRP09769 529 aa18.36■□□□□ 0.53
PTPN5-201ENST00000358540 WDR66Q8TBY9 1149 aa18.36■□□□□ 0.53
PTPN5-201ENST00000358540 RNF26Q9BY78 433 aaPredicted RBP18.36■□□□□ 0.53
PTPN5-201ENST00000358540 SLFN14P0C7P3 912 aa18.36■□□□□ 0.53
PTPN5-201ENST00000358540 LONRF3Q496Y0 759 aa18.36■□□□□ 0.53
PTPN5-201ENST00000358540 SRBD1Q8N5C6 995 aaKnown RBP18.36■□□□□ 0.53
PTPN5-201ENST00000358540 TFAP4Q01664 338 aa18.35■□□□□ 0.53
PTPN5-201ENST00000358540 GABPB1Q06547 395 aaPredicted RBP18.35■□□□□ 0.53
PTPN5-201ENST00000358540 PDE4BQ07343 736 aa18.35■□□□□ 0.53
PTPN5-201ENST00000358540 ARID5BQ14865 1188 aa18.35■□□□□ 0.53
PTPN5-201ENST00000358540 RESP18Q5W5W9 173 aa18.35■□□□□ 0.53
PTPN5-201ENST00000358540 PDILTQ8N807 584 aa18.35■□□□□ 0.53
PTPN5-201ENST00000358540 KRI1Q8N9T8 703 aaKnown RBP18.35■□□□□ 0.53
PTPN5-201ENST00000358540 FOXP1Q9H334 677 aaPredicted RBP18.35■□□□□ 0.53
PTPN5-201ENST00000358540 HPSEQ9Y251 543 aa18.35■□□□□ 0.53
PTPN5-201ENST00000358540 WNT7AO00755 349 aa18.35■□□□□ 0.53
PTPN5-201ENST00000358540 CAVIN2O95810 425 aa18.35■□□□□ 0.53
PTPN5-201ENST00000358540 OLFM4Q6UX06 510 aa18.35■□□□□ 0.53
PTPN5-201ENST00000358540 CD209Q9NNX6 404 aa18.35■□□□□ 0.53
PTPN5-201ENST00000358540 USP17L3A6NCW0 530 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 USP17L4A6NCW7 530 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 C6orf229H3BNL8 230 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 ORC4O43929 436 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 ADRA2BP18089 450 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 TMTC3Q6ZXV5 915 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 USP17L1Q7RTZ2 530 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 CTCFLQ8NI51 663 aaPredicted RBP18.34■□□□□ 0.53
PTPN5-201ENST00000358540 GGA1Q9UJY5 639 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 KCNH3Q9ULD8 1083 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 USP49Q70CQ1 688 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 KRT27Q7Z3Y8 459 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 DDX41Q9UJV9 622 aaKnown RBP18.34■□□□□ 0.53
PTPN5-201ENST00000358540 ADAMTS3O15072 1205 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 CUTAO60888 179 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 PLCD1P51178 756 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 RCAN1P53805 252 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 PLCD3Q8N3E9 789 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 POLLQ9UGP5 575 aa18.34■□□□□ 0.53
PTPN5-201ENST00000358540 RIMBP2O15034 1052 aa18.33■□□□□ 0.53
PTPN5-201ENST00000358540 TNNT1P13805 278 aa18.33■□□□□ 0.53
PTPN5-201ENST00000358540 RILPL1Q5EBL4 403 aa18.33■□□□□ 0.53
PTPN5-201ENST00000358540 CNNM3Q8NE01 707 aa18.33■□□□□ 0.53
PTPN5-201ENST00000358540 RBM17Q96I25 401 aaKnown RBP18.33■□□□□ 0.53
PTPN5-201ENST00000358540 NAT10Q9H0A0 1025 aaKnown RBP18.33■□□□□ 0.53
PTPN5-201ENST00000358540 MKNK2Q9HBH9 465 aa18.33■□□□□ 0.53
PTPN5-201ENST00000358540 CRY2Q49AN0 593 aa18.33■□□□□ 0.52
PTPN5-201ENST00000358540 C12orf60Q5U649 245 aa18.33■□□□□ 0.52
PTPN5-201ENST00000358540 RCSD1Q6JBY9 416 aa18.33■□□□□ 0.52
PTPN5-201ENST00000358540 RASGRP2Q7LDG7 609 aa18.33■□□□□ 0.52
PTPN5-201ENST00000358540 FILIP1Q7Z7B0 1213 aa18.33■□□□□ 0.52
PTPN5-201ENST00000358540 METTL16Q86W50 562 aaKnown RBP18.33■□□□□ 0.52
PTPN5-201ENST00000358540 GRAMD1CQ8IYS0 662 aa18.33■□□□□ 0.52
PTPN5-201ENST00000358540 PROM2Q8N271 834 aa18.33■□□□□ 0.52
PTPN5-201ENST00000358540 ZNF592Q92610 1267 aa18.33■□□□□ 0.52
PTPN5-201ENST00000358540 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.33■□□□□ 0.52
PTPN5-201ENST00000358540 FBXO2Q9UK22 296 aaPredicted RBP18.33■□□□□ 0.52
PTPN5-201ENST00000358540 CNTNAP5Q8WYK1 1306 aa18.33■□□□□ 0.52
PTPN5-201ENST00000358540 PRPF3O43395 683 aaKnown RBP18.32■□□□□ 0.52
PTPN5-201ENST00000358540 BTDP43251 543 aa18.32■□□□□ 0.52
PTPN5-201ENST00000358540 SBK1Q52WX2 424 aa18.32■□□□□ 0.52
PTPN5-201ENST00000358540 IL17RBQ9NRM6 502 aa18.32■□□□□ 0.52
PTPN5-201ENST00000358540 KRT2P35908 639 aa18.32■□□□□ 0.52
PTPN5-201ENST00000358540 RGS22Q8NE09 1264 aa18.32■□□□□ 0.52
PTPN5-201ENST00000358540 NOL10Q9BSC4 688 aaKnown RBP18.32■□□□□ 0.52
PTPN5-201ENST00000358540 RBM28Q9NW13 759 aaKnown RBP18.32■□□□□ 0.52
PTPN5-201ENST00000358540 MKRN1Q9UHC7 482 aaKnown RBP18.32■□□□□ 0.52
PTPN5-201ENST00000358540 ERICH4A6NGS2 130 aa18.32■□□□□ 0.52
PTPN5-201ENST00000358540 DDAH1O94760 285 aa18.32■□□□□ 0.52
PTPN5-201ENST00000358540 XBP1P17861 261 aa18.32■□□□□ 0.52
PTPN5-201ENST00000358540 NLRP12P59046 1061 aa18.32■□□□□ 0.52
PTPN5-201ENST00000358540 IRX5P78411 483 aaPredicted RBP18.32■□□□□ 0.52
PTPN5-201ENST00000358540 TXNRD1Q16881 649 aa18.32■□□□□ 0.52
PTPN5-201ENST00000358540 PHF20Q9BVI0 1012 aa18.32■□□□□ 0.52
PTPN5-201ENST00000358540 SMTNL1A8MU46 457 aa18.31■□□□□ 0.52
PTPN5-201ENST00000358540 F8W031 263 aaPredicted RBP18.31■□□□□ 0.52
PTPN5-201ENST00000358540 POLRMTO00411 1230 aaKnown RBP18.31■□□□□ 0.52
PTPN5-201ENST00000358540 POLR2DO15514 142 aaKnown RBP18.31■□□□□ 0.52
PTPN5-201ENST00000358540 PCP11498 1178 aaKnown RBP18.31■□□□□ 0.52
PTPN5-201ENST00000358540 MFSD14BQ5SR56 506 aa18.31■□□□□ 0.52
PTPN5-201ENST00000358540 FOXP4Q8IVH2 680 aaPredicted RBP18.31■□□□□ 0.52
PTPN5-201ENST00000358540 STAG2Q8N3U4 1231 aa18.31■□□□□ 0.52
PTPN5-201ENST00000358540 CCDC112Q8NEF3 446 aa18.31■□□□□ 0.52
PTPN5-201ENST00000358540 BAG3O95817 575 aa18.31■□□□□ 0.52
PTPN5-201ENST00000358540 KRBA2Q6ZNG9 492 aa18.31■□□□□ 0.52
PTPN5-201ENST00000358540 TBC1D16Q8TBP0 767 aa18.31■□□□□ 0.52
PTPN5-201ENST00000358540 CACTINQ8WUQ7 758 aaKnown RBP18.31■□□□□ 0.52
PTPN5-201ENST00000358540 RTFDC1Q9BY42 306 aaPredicted RBP18.31■□□□□ 0.52
PTPN5-201ENST00000358540 KAT14Q9H8E8 782 aa18.31■□□□□ 0.52
PTPN5-201ENST00000358540 CALM1P0DP23 149 aa18.3■□□□□ 0.52
PTPN5-201ENST00000358540 CALM2P0DP24 149 aa18.3■□□□□ 0.52
PTPN5-201ENST00000358540 CALM3P0DP25 149 aa18.3■□□□□ 0.52
PTPN5-201ENST00000358540 PTPREP23469 700 aa18.3■□□□□ 0.52
PTPN5-201ENST00000358540 ZNF174Q15697 407 aa18.3■□□□□ 0.52
PTPN5-201ENST00000358540 GPKOWQ92917 476 aaPredicted RBP eCLIP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms