RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 LGSNQ5TDP6 509 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 FAM173BQ6P4H8 233 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 SH3GL3Q99963 347 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 TAB2Q9NYJ8 693 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 NRBP1Q9UHY1 535 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 AGTPBP1Q9UPW5 1226 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 TTLL12Q14166 644 aaPredicted RBP9.69□□□□□ -0.86
COL6A6-201ENST00000358511 DIXDC1Q155Q3 683 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 ME3Q16798 604 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 TMOD3Q9NYL9 352 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 RRP36Q96EU6 259 aaKnown RBP9.69□□□□□ -0.86
COL6A6-201ENST00000358511 RILPQ96NA2 401 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 DNAJC8O75937 253 aaPredicted RBP9.69□□□□□ -0.86
COL6A6-201ENST00000358511 MAGEA1P43355 309 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 PPARDQ03181 441 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 ATP2B3Q16720 1220 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 TMEM87BQ96K49 555 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 CDC5LQ99459 802 aaKnown RBP9.69□□□□□ -0.86
COL6A6-201ENST00000358511 GRM1Q13255 1194 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 FAM169AQ9Y6X4 670 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 MORC2Q9Y6X9 1032 aaPredicted RBP9.69□□□□□ -0.86
COL6A6-201ENST00000358511 GSTO1P78417 241 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 GUCY2CP25092 1073 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 PDE4DQ08499 809 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 CASP8Q14790 479 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 NCOA5Q9HCD5 579 aaKnown RBP9.68□□□□□ -0.86
COL6A6-201ENST00000358511 PPP4R1Q8TF05 950 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 LAMC3Q9Y6N6 1575 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 RUNDC3BQ96NL0 473 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 CALUO43852 315 aaPredicted RBP9.68□□□□□ -0.86
COL6A6-201ENST00000358511 PTCD1O75127 700 aaKnown RBP9.68□□□□□ -0.86
COL6A6-201ENST00000358511 RNASELQ05823 741 aaKnown RBP9.68□□□□□ -0.86
COL6A6-201ENST00000358511 CACTINQ8WUQ7 758 aaKnown RBP9.68□□□□□ -0.86
COL6A6-201ENST00000358511 ZKSCAN3Q9BRR0 538 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 CFAP74Q9C0B2 1584 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 ARHGAP42A6NI28 874 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 PHBP35232 272 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 NOP53Q9NZM5 478 aaKnown RBP9.68□□□□□ -0.86
COL6A6-201ENST00000358511 AMFRQ9UKV5 643 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 MAPK8IP1Q9UQF2 711 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 LAMC1P11047 1609 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 USHBP1Q8N6Y0 703 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 PARD6BQ9BYG5 372 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 ZBTB12Q9Y330 459 aaPredicted RBP9.68□□□□□ -0.86
COL6A6-201ENST00000358511 PFKFB1P16118 471 aa9.68□□□□□ -0.86
COL6A6-201ENST00000358511 TRMT44Q8IYL2 757 aaKnown RBP9.68□□□□□ -0.86
COL6A6-201ENST00000358511 TYW1Q9NV66 732 aaKnown RBP9.68□□□□□ -0.86
COL6A6-201ENST00000358511 PLB1Q6P1J6 1458 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 KLHL30Q0D2K2 578 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 MORC3Q14149 939 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 CCDC13Q8IYE1 715 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 PPIP5K1Q6PFW1 1433 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 ATP5J2-PTCD1G3V325 749 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 CREB3O43889 395 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 RXRAP19793 462 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 GUCY2DQ02846 1103 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 SF3A3Q12874 501 aaKnown RBP eCLIP9.67□□□□□ -0.86
COL6A6-201ENST00000358511 TAF11Q15544 211 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 TESK2Q96S53 571 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.67□□□□□ -0.86
COL6A6-201ENST00000358511 TTC36A6NLP5 189 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 NR1D1P20393 614 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 TRAF1Q13077 416 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 SPDYE3A6NKU9 549 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 DNM2P50570 870 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 WAPLQ7Z5K2 1190 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 HVCN1Q96D96 273 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 NCAPGQ9BPX3 1015 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 MRFAP1Q9Y605 127 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 GON4LQ3T8J9 2241 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 HMGB1P1B2RPK0 211 aaPredicted RBP9.67□□□□□ -0.86
COL6A6-201ENST00000358511 THAP12O43422 761 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 GNA14O95837 355 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 TMED1Q13445 227 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 CCDC89Q8N998 374 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 MTMR6Q9Y217 621 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 SHROOM2Q13796 1616 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 KCNK3O14649 394 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 SNX16P57768 344 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 ZNF174Q15697 407 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 WHAMMQ8TF30 809 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 C14orf93Q9H972 538 aaKnown RBP9.67□□□□□ -0.86
COL6A6-201ENST00000358511 XAB2Q9HCS7 855 aaKnown RBP9.67□□□□□ -0.86
COL6A6-201ENST00000358511 INTS9Q9NV88 658 aaKnown RBP9.67□□□□□ -0.86
COL6A6-201ENST00000358511 SNRPA1P09661 255 aaKnown RBP9.67□□□□□ -0.86
COL6A6-201ENST00000358511 LIN9Q5TKA1 542 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 KLHDC4Q8TBB5 520 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 TACC3Q9Y6A5 838 aa9.67□□□□□ -0.86
COL6A6-201ENST00000358511 BAG2O95816 211 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 HLA-DOAP06340 250 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 PSMD6Q15008 389 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 GEN1Q17RS7 908 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 ANKRD42Q8N9B4 389 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 MAIP1Q8WWC4 291 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 CTTNBP2NLQ9P2B4 639 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 PA2G4Q9UQ80 394 aaKnown RBP9.66□□□□□ -0.86
COL6A6-201ENST00000358511 EPN1Q9Y6I3 576 aaPredicted RBP9.66□□□□□ -0.86
COL6A6-201ENST00000358511 MAP3K5Q99683 1374 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 TNFAIP3P21580 790 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 SERPINB6P35237 376 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms