RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 KLF18A0A0U1RQI7 1052 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 RBSNQ9H1K0 784 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 WDR62O43379 1518 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 TTC37Q6PGP7 1564 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 ARHGAP10A1A4S6 786 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 PNMA8AQ86V59 439 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-202ENST00000357162 DDX27Q96GQ7 796 aaKnown RBP7.27□□□□□ -1.25
VPS13B-202ENST00000357162 ZNF830Q96NB3 372 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-202ENST00000357162 ANKRD2Q9GZV1 360 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 PAG1Q9NWQ8 432 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 RPS6KB1P23443 525 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 TERF2Q15554 542 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 SV2BQ7L1I2 683 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 SLC26A6Q9BXS9 759 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 METTL14Q9HCE5 456 aaKnown RBP7.27□□□□□ -1.25
VPS13B-202ENST00000357162 WDR19Q8NEZ3 1342 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 RAD21O60216 631 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 MRPL50Q8N5N7 158 aaKnown RBP7.27□□□□□ -1.25
VPS13B-202ENST00000357162 TEKT1Q969V4 418 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 CCDC124Q96CT7 223 aaKnown RBP7.27□□□□□ -1.25
VPS13B-202ENST00000357162 ERBB4Q15303 1308 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 ZNF518AQ6AHZ1 1483 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 F5P12259 2224 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 CARMIL3Q8ND23 1372 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 TADA2BQ86TJ2 420 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 RRP15Q9Y3B9 282 aaKnown RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 ASPHQ12797 758 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 CATSPER1Q8NEC5 780 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 TCP11Q8WWU5 503 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 NOP53Q9NZM5 478 aaKnown RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 DIS3Q9Y2L1 958 aaKnown RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 RANBP6O60518 1105 aaKnown RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 BPIFB4P59827 614 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 Q6ZUG5 572 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 RASGRF2O14827 1237 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 PASKQ96RG2 1323 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 CBX8Q9HC52 389 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 PLEKHG1Q9ULL1 1385 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 IGHDP01880 384 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 MRPS25P82663 173 aaKnown RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 ARHGAP27Q6ZUM4 889 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 SDCCAG8Q86SQ7 713 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 NECTIN2Q92692 538 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 ANGPTL2Q9UKU9 493 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 SAMD9LQ8IVG5 1584 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 hCG_1984214I3L0E3 225 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 GSTA5Q7RTV2 222 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 ABCC4O15439 1325 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 LRRC23Q53EV4 343 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 KRT25Q7Z3Z0 450 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 SRRM1Q8IYB3 904 aaKnown RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 RRAGDQ9NQL2 400 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 CFAP74Q9C0B2 1584 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 MCF2L2Q86YR7 1114 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 STAMBPL1Q96FJ0 436 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 ZNF274Q96GC6 653 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 ANTXR1Q9H6X2 564 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 RPAP1Q9BWH6 1393 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 PLB1Q6P1J6 1458 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 MYH8P13535 1937 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 CALUO43852 315 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 IL9RQ01113 521 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 DTHD1Q6ZMT9 781 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 GEMIN8Q9NWZ8 242 aaKnown RBP7.26□□□□□ -1.25
VPS13B-202ENST00000357162 PPP1R9AQ9ULJ8 1098 aa7.26□□□□□ -1.25
VPS13B-202ENST00000357162 CREB3O43889 395 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 PSD3Q9NYI0 1048 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 SHROOM2Q13796 1616 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 MATR3P43243 847 aaKnown RBP eCLIP7.25□□□□□ -1.252e-6■■■■□ 23.9
VPS13B-202ENST00000357162 CDC37Q16543 378 aaPredicted RBP7.25□□□□□ -1.25
VPS13B-202ENST00000357162 MUM1L1Q5H9M0 696 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 POLE3Q9NRF9 147 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 MID2Q9UJV3 735 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 ORC2Q13416 577 aaPredicted RBP7.25□□□□□ -1.25
VPS13B-202ENST00000357162 KRT39Q6A163 491 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 PDLIM2Q96JY6 352 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 CAV1Q03135 178 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 SELENOSQ9BQE4 189 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 SLC8A3P57103 927 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 TMCO5AQ8N6Q1 288 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 NUP214P35658 2090 aaPredicted RBP7.25□□□□□ -1.25
VPS13B-202ENST00000357162 PDCD7Q8N8D1 485 aaKnown RBP7.25□□□□□ -1.25
VPS13B-202ENST00000357162 MYO5CQ9NQX4 1742 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 SERPINB4P48594 390 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 SFMBT2Q5VUG0 894 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 NUDT16Q96DE0 195 aaKnown RBP7.25□□□□□ -1.25
VPS13B-202ENST00000357162 SYCP2Q9BX26 1530 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 LRRC8AQ8IWT6 810 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 KIFC3Q9BVG8 833 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 SENP1Q9P0U3 644 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 AMOTL2Q9Y2J4 779 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 PHACTR2O75167 634 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 POLR3DP05423 398 aaPredicted RBP7.25□□□□□ -1.25
VPS13B-202ENST00000357162 RHOXF2BP0C7M4 288 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 KRT9P35527 623 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 WDR44Q5JSH3 913 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 OSBPL9Q96SU4 736 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 RHOXF2Q9BQY4 288 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 RNF113AO15541 343 aaKnown RBP7.25□□□□□ -1.25
VPS13B-202ENST00000357162 KPNA2P52292 529 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms