RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 GOLGA8HP0CJ92 632 aa15.83■□□□□ 0.12
SREBF1-202ENST00000355815 HIBADHP31937 336 aaKnown RBP15.83■□□□□ 0.12
SREBF1-202ENST00000355815 NCBP1Q09161 790 aaKnown RBP15.83■□□□□ 0.12
SREBF1-202ENST00000355815 NOSTRINQ8IVI9 506 aa15.83■□□□□ 0.12
SREBF1-202ENST00000355815 TCEAL9Q9UHQ7 104 aa15.83■□□□□ 0.12
SREBF1-202ENST00000355815 PRDM4Q9UKN5 801 aa15.83■□□□□ 0.12
SREBF1-202ENST00000355815 CTDNEP1O95476 244 aa15.83■□□□□ 0.12
SREBF1-202ENST00000355815 TERF2Q15554 542 aa15.83■□□□□ 0.12
SREBF1-202ENST00000355815 GPR108Q9NPR9 543 aa15.83■□□□□ 0.12
SREBF1-202ENST00000355815 ST7Q9NRC1 585 aa15.83■□□□□ 0.12
SREBF1-202ENST00000355815 KIF28PB7ZC32 967 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 KIF5BP33176 963 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 RILPL1Q5EBL4 403 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.82■□□□□ 0.12
SREBF1-202ENST00000355815 RASGRP4Q8TDF6 673 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 GSTTP1A0A1W2PQM5 241 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 USP27XA6NNY8 438 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 GNAT2P19087 354 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 TTC19Q6DKK2 380 aaPredicted RBP15.82■□□□□ 0.12
SREBF1-202ENST00000355815 MAPKAPK5Q8IW41 473 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.82■□□□□ 0.12
SREBF1-202ENST00000355815 USP42Q9H9J4 1324 aaKnown RBP15.82■□□□□ 0.12
SREBF1-202ENST00000355815 FRMD3A2A2Y4 597 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 POSTNQ15063 836 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 CNPY4Q8N129 248 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 USP32Q8NFA0 1604 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 GPKOWQ92917 476 aaPredicted RBP eCLIP15.82■□□□□ 0.123e-6■■□□□ 13.6
SREBF1-202ENST00000355815 GPR101Q96P66 508 aaPredicted RBP15.82■□□□□ 0.12
SREBF1-202ENST00000355815 KCNF1Q9H3M0 494 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 PPP1R1BQ9UD71 204 aaPredicted RBP15.82■□□□□ 0.12
SREBF1-202ENST00000355815 SSR1P43307 286 aaKnown RBP15.82■□□□□ 0.12
SREBF1-202ENST00000355815 LETM2Q2VYF4 491 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 CPLX4Q7Z7G2 160 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 UBA5Q9GZZ9 404 aa15.82■□□□□ 0.12
SREBF1-202ENST00000355815 FOXN1O15353 648 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 KCNQ2O43526 872 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 CMA1P23946 247 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 STRBPQ96SI9 672 aaKnown RBP15.81■□□□□ 0.12
SREBF1-202ENST00000355815 KIF20BQ96Q89 1820 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 DIP2BQ9P265 1576 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 ZMYM6O95789 1325 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 NEDD4P46934 1319 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 MROH5Q6ZUA9 1318 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 NAPAP54920 295 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 TFAP4Q01664 338 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 SLC39A14Q15043 492 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 PDE11AQ9HCR9 933 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 TCP11L1Q9NUJ3 509 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 CUTAO60888 179 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 BAG3O95817 575 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 ETF1P62495 437 aaKnown RBP15.81■□□□□ 0.12
SREBF1-202ENST00000355815 MSL1Q68DK7 614 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 CRACR2BQ8N4Y2 399 aaPredicted RBP15.81■□□□□ 0.12
SREBF1-202ENST00000355815 PCDHB6Q9Y5E3 794 aa15.81■□□□□ 0.12
SREBF1-202ENST00000355815 KIF4AO95239 1232 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 CLNS1AP54105 237 aaKnown RBP15.8■□□□□ 0.12
SREBF1-202ENST00000355815 RPS8P62241 208 aaKnown RBP15.8■□□□□ 0.12
SREBF1-202ENST00000355815 UBE3CQ15386 1083 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 CTNND2Q9UQB3 1225 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 RTCBQ9Y3I0 505 aaKnown RBP15.8■□□□□ 0.12
SREBF1-202ENST00000355815 LDHBP07195 334 aaKnown RBP15.8■□□□□ 0.12
SREBF1-202ENST00000355815 ALS2CR12Q96Q35 445 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 RRP15Q9Y3B9 282 aaKnown RBP15.8■□□□□ 0.12
SREBF1-202ENST00000355815 C1orf167Q5SNV9 1468 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 RIMS1Q86UR5 1692 aaKnown RBP15.8■□□□□ 0.12
SREBF1-202ENST00000355815 GOLGA6CA6NDK9 693 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 GOLGA6DP0CG33 693 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 GUCY1A2P33402 732 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 ERFEQ4G0M1 354 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 USPL1Q5W0Q7 1092 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 TGFBRAP1Q8WUH2 860 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 ISCA1Q9BUE6 129 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 GOLGA6AQ9NYA3 693 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 SRP68Q9UHB9 627 aaKnown RBP15.8■□□□□ 0.12
SREBF1-202ENST00000355815 BAZ2BQ9UIF8 2168 aaKnown RBP15.8■□□□□ 0.12
SREBF1-202ENST00000355815 UBAP1LF5GYI3 381 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 CCDC122Q5T0U0 273 aa15.8■□□□□ 0.12
SREBF1-202ENST00000355815 FDPSP14324 419 aaKnown RBP15.79■□□□□ 0.12
SREBF1-202ENST00000355815 EXOSC10Q01780 885 aaKnown RBP15.79■□□□□ 0.12
SREBF1-202ENST00000355815 KANK3Q6NY19 840 aa15.79■□□□□ 0.12
SREBF1-202ENST00000355815 IGSF22Q8N9C0 903 aa15.79■□□□□ 0.12
SREBF1-202ENST00000355815 MED23Q9ULK4 1368 aa15.79■□□□□ 0.12
SREBF1-202ENST00000355815 ZSCAN20P17040 1043 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-202ENST00000355815 ASIC1P78348 528 aa15.79■□□□□ 0.12
SREBF1-202ENST00000355815 NAA15Q9BXJ9 866 aaKnown RBP15.79■□□□□ 0.12
SREBF1-202ENST00000355815 SH2B2O14492 632 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-202ENST00000355815 PEX19P40855 299 aa15.79■□□□□ 0.12
SREBF1-202ENST00000355815 PARP10Q53GL7 1025 aa15.79■□□□□ 0.12
SREBF1-202ENST00000355815 TTC38Q5R3I4 469 aa15.79■□□□□ 0.12
SREBF1-202ENST00000355815 PNMA8AQ86V59 439 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-202ENST00000355815 EPSTI1Q96J88 318 aa15.79■□□□□ 0.12
SREBF1-202ENST00000355815 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.79■□□□□ 0.12
SREBF1-202ENST00000355815 TAB2Q9NYJ8 693 aa15.79■□□□□ 0.12
SREBF1-202ENST00000355815 NMT2O60551 498 aa15.78■□□□□ 0.12
SREBF1-202ENST00000355815 OXER1Q8TDS5 423 aa15.78■□□□□ 0.12
SREBF1-202ENST00000355815 ZNF622Q969S3 477 aaKnown RBP eCLIP15.78■□□□□ 0.128e-7■■■□□ 15.4
SREBF1-202ENST00000355815 CPVLQ9H3G5 476 aa15.78■□□□□ 0.12
SREBF1-202ENST00000355815 OPA1O60313 960 aa15.78■□□□□ 0.12
SREBF1-202ENST00000355815 CTNNBL1Q8WYA6 563 aaPredicted RBP15.78■□□□□ 0.12
SREBF1-202ENST00000355815 MYCBPQ99417 103 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms