RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 CCDC144CPQ8IYA2 1237 aa19.95■□□□□ 0.78
VPS13B-201ENST00000355155 AIFM3Q96NN9 605 aa19.95■□□□□ 0.78
VPS13B-201ENST00000355155 FUCA2Q9BTY2 467 aa19.95■□□□□ 0.78
VPS13B-201ENST00000355155 MXD3Q9BW11 206 aa19.95■□□□□ 0.78
VPS13B-201ENST00000355155 DHX36Q9H2U1 1008 aaKnown RBP19.95■□□□□ 0.78
VPS13B-201ENST00000355155 KCNQ5Q9NR82 932 aa19.95■□□□□ 0.78
VPS13B-201ENST00000355155 DDX19AQ9NUU7 478 aaKnown RBP19.95■□□□□ 0.78
VPS13B-201ENST00000355155 TFIP11Q9UBB9 837 aaKnown RBP19.95■□□□□ 0.78
VPS13B-201ENST00000355155 XRCC6P12956 609 aaKnown RBP eCLIP19.94■□□□□ 0.78
VPS13B-201ENST00000355155 TRIM29Q14134 588 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 KCNG4Q8TDN1 519 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 PHF20Q9BVI0 1012 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 C21orf2O43822 256 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 NMT2O60551 498 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 TSPY3P0CV98 308 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 TSPY8P0CW00 308 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 GUCY1A2P33402 732 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 STK11IPQ8N1F8 1099 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 MTMR14Q8NCE2 650 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 CTCFLQ8NI51 663 aaPredicted RBP19.94■□□□□ 0.78
VPS13B-201ENST00000355155 KAT14Q9H8E8 782 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 SH3GLB2Q9NR46 395 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 SAP30BPQ9UHR5 308 aaKnown RBP19.94■□□□□ 0.78
VPS13B-201ENST00000355155 PALM3A6NDB9 673 aaPredicted RBP19.94■□□□□ 0.78
VPS13B-201ENST00000355155 PPP4R3BQ5MIZ7 849 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 OTUD7BQ6GQQ9 843 aa19.94■□□□□ 0.78
VPS13B-201ENST00000355155 LTBP3Q9NS15 1303 aa19.93■□□□□ 0.78
VPS13B-201ENST00000355155 FAM237AA0A1B0GTK4 181 aa19.93■□□□□ 0.78
VPS13B-201ENST00000355155 GUCY1B3Q02153 619 aa19.93■□□□□ 0.78
VPS13B-201ENST00000355155 SRBD1Q8N5C6 995 aaKnown RBP19.93■□□□□ 0.78
VPS13B-201ENST00000355155 NUP133Q8WUM0 1156 aa19.93■□□□□ 0.78
VPS13B-201ENST00000355155 PPIP5K2O43314 1243 aa19.93■□□□□ 0.78
VPS13B-201ENST00000355155 PPP6R2O75170 966 aa19.93■□□□□ 0.78
VPS13B-201ENST00000355155 ENTPD3O75355 529 aa19.93■□□□□ 0.78
VPS13B-201ENST00000355155 PNMA1Q8ND90 353 aa19.93■□□□□ 0.78
VPS13B-201ENST00000355155 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.93■□□□□ 0.78
VPS13B-201ENST00000355155 PLEKHA8P1O95397 391 aa19.92■□□□□ 0.78
VPS13B-201ENST00000355155 ADALQ6DHV7 355 aa19.92■□□□□ 0.78
VPS13B-201ENST00000355155 SHISA4Q96DD7 197 aa19.92■□□□□ 0.78
VPS13B-201ENST00000355155 TMEM47Q9BQJ4 181 aa19.92■□□□□ 0.78
VPS13B-201ENST00000355155 MAD2L2Q9UI95 211 aa19.92■□□□□ 0.78
VPS13B-201ENST00000355155 CD2APQ9Y5K6 639 aa19.92■□□□□ 0.78
VPS13B-201ENST00000355155 ANO1Q5XXA6 986 aa19.92■□□□□ 0.78
VPS13B-201ENST00000355155 RSBN1LQ6PCB5 846 aaPredicted RBP19.92■□□□□ 0.78
VPS13B-201ENST00000355155 SLC44A5Q8NCS7 719 aa19.92■□□□□ 0.78
VPS13B-201ENST00000355155 PIM2Q9P1W9 311 aa19.92■□□□□ 0.78
VPS13B-201ENST00000355155 TOP1P11387 765 aaKnown RBP19.91■□□□□ 0.78
VPS13B-201ENST00000355155 SLC39A14Q15043 492 aa19.91■□□□□ 0.78
VPS13B-201ENST00000355155 PTPAQ15257 358 aa19.91■□□□□ 0.78
VPS13B-201ENST00000355155 PFKFB3Q16875 520 aaPredicted RBP19.91■□□□□ 0.78
VPS13B-201ENST00000355155 NOSTRINQ8IVI9 506 aa19.91■□□□□ 0.78
VPS13B-201ENST00000355155 ENGASEQ8NFI3 743 aa19.91■□□□□ 0.78
VPS13B-201ENST00000355155 GJB4Q9NTQ9 266 aa19.91■□□□□ 0.78
VPS13B-201ENST00000355155 SNHG28P0DPA3 235 aa19.91■□□□□ 0.78
VPS13B-201ENST00000355155 XBP1P17861 261 aa19.91■□□□□ 0.78
VPS13B-201ENST00000355155 TNFRSF25Q93038 417 aa19.91■□□□□ 0.78
VPS13B-201ENST00000355155 CCDC17Q96LX7 622 aa19.91■□□□□ 0.78
VPS13B-201ENST00000355155 SPZ1Q9BXG8 430 aa19.91■□□□□ 0.78
VPS13B-201ENST00000355155 SERPINB13Q9UIV8 391 aa19.91■□□□□ 0.78
VPS13B-201ENST00000355155 POLD1P28340 1107 aa19.9■□□□□ 0.78
VPS13B-201ENST00000355155 SHMT1P34896 483 aa19.9■□□□□ 0.78
VPS13B-201ENST00000355155 CLSTN2Q9H4D0 955 aa19.9■□□□□ 0.78
VPS13B-201ENST00000355155 FAM198AQ9UFP1 575 aa19.9■□□□□ 0.78
VPS13B-201ENST00000355155 LIG1P18858 919 aa19.9■□□□□ 0.78
VPS13B-201ENST00000355155 SCNN1DP51172 638 aa19.9■□□□□ 0.78
VPS13B-201ENST00000355155 NPY5RQ15761 445 aa19.9■□□□□ 0.78
VPS13B-201ENST00000355155 FBXW7Q969H0 707 aa19.9■□□□□ 0.78
VPS13B-201ENST00000355155 SYCE3A1L190 88 aa19.89■□□□□ 0.78
VPS13B-201ENST00000355155 HLA-DOAP06340 250 aa19.89■□□□□ 0.78
VPS13B-201ENST00000355155 SAFBQ15424 915 aaKnown RBP eCLIP19.89■□□□□ 0.78
VPS13B-201ENST00000355155 FKBP1CQ5VVH2 108 aa19.89■□□□□ 0.78
VPS13B-201ENST00000355155 AGBL3Q8NEM8 1001 aa19.89■□□□□ 0.78
VPS13B-201ENST00000355155 TATDN1Q6P1N9 297 aa19.89■□□□□ 0.77
VPS13B-201ENST00000355155 ZBED3Q96IU2 234 aaPredicted RBP19.89■□□□□ 0.77
VPS13B-201ENST00000355155 CLIC4Q9Y696 253 aa19.89■□□□□ 0.77
VPS13B-201ENST00000355155 F8W031 263 aaPredicted RBP19.89■□□□□ 0.77
VPS13B-201ENST00000355155 FOSBP53539 338 aa19.89■□□□□ 0.77
VPS13B-201ENST00000355155 AKAP17AQ02040 695 aaKnown RBP19.89■□□□□ 0.77
VPS13B-201ENST00000355155 DAGLBQ8NCG7 672 aa19.89■□□□□ 0.77
VPS13B-201ENST00000355155 MTMR4Q9NYA4 1195 aa19.89■□□□□ 0.77
VPS13B-201ENST00000355155 UBE2Q2LH0YL09 131 aa19.88■□□□□ 0.77
VPS13B-201ENST00000355155 PPFIA3O75145 1194 aa19.88■□□□□ 0.77
VPS13B-201ENST00000355155 RILPL1Q5EBL4 403 aa19.88■□□□□ 0.77
VPS13B-201ENST00000355155 DIS3L2Q8IYB7 885 aaKnown RBP19.88■□□□□ 0.77
VPS13B-201ENST00000355155 SYNPO2Q9UMS6 1093 aa19.88■□□□□ 0.77
VPS13B-201ENST00000355155 PCDHA7Q9UN72 937 aa19.88■□□□□ 0.77
VPS13B-201ENST00000355155 MYH4Q9Y623 1939 aa19.88■□□□□ 0.77
VPS13B-201ENST00000355155 SCG2P13521 617 aa19.88■□□□□ 0.77
VPS13B-201ENST00000355155 AXDND1Q5T1B0 1012 aaPredicted RBP19.88■□□□□ 0.77
VPS13B-201ENST00000355155 FOXP4Q8IVH2 680 aaPredicted RBP19.88■□□□□ 0.77
VPS13B-201ENST00000355155 TSPY26PQ9H489 355 aa19.88■□□□□ 0.77
VPS13B-201ENST00000355155 ZNRF3Q9ULT6 936 aa19.88■□□□□ 0.77
VPS13B-201ENST00000355155 SPTLC2O15270 562 aa19.87■□□□□ 0.77
VPS13B-201ENST00000355155 SNW1Q13573 536 aaKnown RBP19.87■□□□□ 0.77
VPS13B-201ENST00000355155 GALNT17Q6IS24 598 aa19.87■□□□□ 0.77
VPS13B-201ENST00000355155 KIAA0825Q8IV33 1275 aa19.87■□□□□ 0.77
VPS13B-201ENST00000355155 CTAGE5O15320 804 aa19.87■□□□□ 0.77
VPS13B-201ENST00000355155 CEP95Q96GE4 821 aa19.87■□□□□ 0.77
VPS13B-201ENST00000355155 FTOQ9C0B1 505 aaKnown RBP eCLIP19.87■□□□□ 0.77
VPS13B-201ENST00000355155 NFIAQ12857 509 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms