RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 ZNF185O15231 689 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 CCNHP51946 323 aaPredicted RBP8.84□□□□□ -0.99
CD46-203ENST00000354848 C2orf54Q08AI8 447 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 PROSER3Q2NL68 480 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 CDKAL1Q5VV42 579 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 KRT40Q6A162 431 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 TLDC1Q6P9B6 456 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 SAMD1Q6SPF0 538 aaPredicted RBP8.84□□□□□ -0.99
CD46-203ENST00000354848 KIRREL3Q8IZU9 778 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 SH2D3CQ8N5H7 860 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 KRI1Q8N9T8 703 aaKnown RBP8.84□□□□□ -0.99
CD46-203ENST00000354848 CAGE1Q8TC20 777 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 CHP1Q99653 195 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 DBNDD2Q9BQY9 259 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 HELLSQ9NRZ9 838 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 EPN1Q9Y6I3 576 aaPredicted RBP8.84□□□□□ -0.99
CD46-203ENST00000354848 NWD2Q9ULI1 1742 aa8.83□□□□□ -1
CD46-203ENST00000354848 MAP3K15Q6ZN16 1313 aa8.83□□□□□ -1
CD46-203ENST00000354848 SYNRGQ9UMZ2 1314 aa8.83□□□□□ -1
CD46-203ENST00000354848 KLHL33A6NCF5 533 aa8.83□□□□□ -1
CD46-203ENST00000354848 NDUFA10O95299 355 aa8.83□□□□□ -1
CD46-203ENST00000354848 GRIN1Q05586 938 aa8.83□□□□□ -1
CD46-203ENST00000354848 TFCP2Q12800 502 aa8.83□□□□□ -1
CD46-203ENST00000354848 GRIK3Q13003 919 aa8.83□□□□□ -1
CD46-203ENST00000354848 IFT88Q13099 833 aa8.83□□□□□ -1
CD46-203ENST00000354848 KLHL10Q6JEL2 608 aa8.83□□□□□ -1
CD46-203ENST00000354848 PARP9Q8IXQ6 854 aa8.83□□□□□ -1
CD46-203ENST00000354848 TSEN2Q8NCE0 465 aaKnown RBP8.83□□□□□ -1
CD46-203ENST00000354848 LINS1Q8NG48 757 aa8.83□□□□□ -1
CD46-203ENST00000354848 RUFY1Q96T51 708 aa8.83□□□□□ -1
CD46-203ENST00000354848 NUP88Q99567 741 aaPredicted RBP8.83□□□□□ -1
CD46-203ENST00000354848 ALG1Q9BT22 464 aa8.83□□□□□ -1
CD46-203ENST00000354848 HAUS4Q9H6D7 363 aa8.83□□□□□ -1
CD46-203ENST00000354848 POLD4Q9HCU8 107 aa8.83□□□□□ -1
CD46-203ENST00000354848 METP08581 1390 aa8.83□□□□□ -1
CD46-203ENST00000354848 EZRP15311 586 aaKnown RBP8.83□□□□□ -1
CD46-203ENST00000354848 CD44P16070 742 aaKnown RBP8.83□□□□□ -1
CD46-203ENST00000354848 GUCY1A3Q02108 690 aa8.83□□□□□ -1
CD46-203ENST00000354848 KCTD16Q68DU8 428 aa8.83□□□□□ -1
CD46-203ENST00000354848 CYB5D1Q6P9G0 228 aa8.83□□□□□ -1
CD46-203ENST00000354848 SPATA20Q8TB22 786 aa8.83□□□□□ -1
CD46-203ENST00000354848 RNPC3Q96LT9 517 aaKnown RBP8.83□□□□□ -1
CD46-203ENST00000354848 TFR2Q9UP52 801 aa8.83□□□□□ -1
CD46-203ENST00000354848 NWD1Q149M9 1564 aa8.83□□□□□ -1
CD46-203ENST00000354848 DIP2CQ9Y2E4 1556 aa8.83□□□□□ -1
CD46-203ENST00000354848 CCT6AP40227 531 aaKnown RBP8.82□□□□□ -1
CD46-203ENST00000354848 HDLBPQ00341 1268 aaKnown RBP8.82□□□□□ -1
CD46-203ENST00000354848 NNTQ13423 1086 aa8.82□□□□□ -1
CD46-203ENST00000354848 E2F5Q15329 346 aa8.82□□□□□ -1
CD46-203ENST00000354848 ZKSCAN8Q15776 578 aaPredicted RBP8.82□□□□□ -1
CD46-203ENST00000354848 EZH2Q15910 746 aaKnown RBP8.82□□□□□ -1
CD46-203ENST00000354848 ALS2CLQ60I27 953 aa8.82□□□□□ -1
CD46-203ENST00000354848 C6orf89Q6UWU4 347 aa8.82□□□□□ -1
CD46-203ENST00000354848 FUKQ8N0W3 1084 aa8.82□□□□□ -1
CD46-203ENST00000354848 STK11IPQ8N1F8 1099 aa8.82□□□□□ -1
CD46-203ENST00000354848 MAGEC3Q8TD91 643 aa8.82□□□□□ -1
CD46-203ENST00000354848 ZNF483Q8TF39 744 aaPredicted RBP8.82□□□□□ -1
CD46-203ENST00000354848 HDAC7Q8WUI4 952 aa8.82□□□□□ -1
CD46-203ENST00000354848 AIDAQ96BJ3 306 aa8.82□□□□□ -1
CD46-203ENST00000354848 DMGDHQ9UI17 866 aaKnown RBP8.82□□□□□ -1
CD46-203ENST00000354848 TOPAZ1Q8N9V7 1692 aa8.82□□□□□ -1
CD46-203ENST00000354848 NRXN3Q9Y4C0 1643 aa8.82□□□□□ -1
CD46-203ENST00000354848 PRC1O43663 620 aa8.82□□□□□ -1
CD46-203ENST00000354848 HSF2BPO75031 334 aa8.82□□□□□ -1
CD46-203ENST00000354848 SKAP2O75563 359 aaPredicted RBP8.82□□□□□ -1
CD46-203ENST00000354848 SSBP05455 408 aaKnown RBP eCLIP8.82□□□□□ -1
CD46-203ENST00000354848 KRT9P35527 623 aa8.82□□□□□ -1
CD46-203ENST00000354848 SEC24CP53992 1094 aa8.82□□□□□ -1
CD46-203ENST00000354848 DRP2Q13474 957 aa8.82□□□□□ -1
CD46-203ENST00000354848 CUL4BQ13620 913 aa8.82□□□□□ -1
CD46-203ENST00000354848 ZMYM1Q5SVZ6 1142 aa8.82□□□□□ -1
CD46-203ENST00000354848 CCDC122Q5T0U0 273 aa8.82□□□□□ -1
CD46-203ENST00000354848 KDM7AQ6ZMT4 941 aa8.82□□□□□ -1
CD46-203ENST00000354848 MYCBPAPQ8TBZ2 947 aa8.82□□□□□ -1
CD46-203ENST00000354848 CCDC114Q96M63 670 aa8.82□□□□□ -1
CD46-203ENST00000354848 SCLT1Q96NL6 688 aa8.82□□□□□ -1
CD46-203ENST00000354848 CCT8L2Q96SF2 557 aa8.82□□□□□ -1
CD46-203ENST00000354848 ATP6V0A4Q9HBG4 840 aa8.82□□□□□ -1
CD46-203ENST00000354848 GGA2Q9UJY4 613 aa8.82□□□□□ -1
CD46-203ENST00000354848 TPX2Q9ULW0 747 aaKnown RBP8.82□□□□□ -1
CD46-203ENST00000354848 SLIT1O75093 1534 aa8.82□□□□□ -1
CD46-203ENST00000354848 KRT14P02533 472 aa8.82□□□□□ -1
CD46-203ENST00000354848 NAA25Q14CX7 972 aa8.82□□□□□ -1
CD46-203ENST00000354848 PTGISQ16647 500 aa8.82□□□□□ -1
CD46-203ENST00000354848 EPHA10Q5JZY3 1008 aa8.82□□□□□ -1
CD46-203ENST00000354848 CCDC70Q6NSX1 233 aa8.82□□□□□ -1
CD46-203ENST00000354848 NLRP14Q86W24 1093 aa8.82□□□□□ -1
CD46-203ENST00000354848 CCDC50Q8IVM0 306 aa8.82□□□□□ -1
CD46-203ENST00000354848 ZIM3Q96PE6 472 aa8.82□□□□□ -1
CD46-203ENST00000354848 LGR6Q9HBX8 967 aa8.82□□□□□ -1
CD46-203ENST00000354848 MAST3O60307 1309 aa8.81□□□□□ -1
CD46-203ENST00000354848 SEMA3EO15041 775 aa8.81□□□□□ -1
CD46-203ENST00000354848 ACTN4O43707 911 aaKnown RBP8.81□□□□□ -1
CD46-203ENST00000354848 PPP1R37O75864 691 aa8.81□□□□□ -1
CD46-203ENST00000354848 EPHB4P54760 987 aa8.81□□□□□ -1
CD46-203ENST00000354848 HAND2P61296 217 aa8.81□□□□□ -1
CD46-203ENST00000354848 HERVK_113P62684 666 aa8.81□□□□□ -1
CD46-203ENST00000354848 LRRC1Q9BTT6 524 aa8.81□□□□□ -1
CD46-203ENST00000354848 CCDC9Q9Y3X0 531 aaKnown RBP8.81□□□□□ -1
CD46-203ENST00000354848 GOLGA6L7A0A1B0GV03 622 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms