RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 CCDC144CPQ8IYA2 1237 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 TRIML1Q8N9V2 468 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 KLHDC4Q8TBB5 520 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 MKL1Q969V6 931 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 ARHGEF10LQ9HCE6 1279 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 WWC3Q9ULE0 1092 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 NTSR2O95665 410 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 RWDD2BP57060 319 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 GRIK3Q13003 919 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 TADA2BQ86TJ2 420 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 DHX40Q8IX18 779 aaKnown RBP12.31□□□□□ -0.44
SND1-201ENST00000354725 NLGN1Q8N2Q7 840 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 ZNF483Q8TF39 744 aaPredicted RBP12.31□□□□□ -0.44
SND1-201ENST00000354725 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 NRBP1Q9UHY1 535 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 SNED1Q8TER0 1413 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 ZBTB7AO95365 584 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 TCIRG1Q13488 830 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 MCMDC2Q4G0Z9 681 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 SPC24Q8NBT2 197 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 MORC4Q8TE76 937 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 BRF1Q92994 677 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 EDC3Q96F86 508 aaKnown RBP12.3□□□□□ -0.44
SND1-201ENST00000354725 TCEANC2Q96MN5 208 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 GOLPH3LQ9H4A5 285 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
SND1-201ENST00000354725 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
SND1-201ENST00000354725 NEFHP12036 1026 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 USP8P40818 1118 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 CAMK4Q16566 473 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 GBP6Q6ZN66 633 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 Q6ZUG5 572 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 ATG9AQ7Z3C6 839 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 CACTINQ8WUQ7 758 aaKnown RBP12.3□□□□□ -0.44
SND1-201ENST00000354725 NPHP1O15259 732 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 SLU7O95391 586 aaKnown RBP12.3□□□□□ -0.44
SND1-201ENST00000354725 FOXO4P98177 505 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 LRMPQ12912 555 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 KBTBD3Q8NAB2 608 aa12.3□□□□□ -0.44
SND1-201ENST00000354725 CHGBP05060 677 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 TPD52L1Q16890 204 aaPredicted RBP12.29□□□□□ -0.44
SND1-201ENST00000354725 ARMC3Q5W041 872 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 CKAP2LQ8IYA6 745 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.29□□□□□ -0.44
SND1-201ENST00000354725 HELLSQ9NRZ9 838 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 TIAM2Q8IVF5 1701 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 FOXP2O15409 715 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 TFCP2Q12800 502 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 FER1L6Q2WGJ9 1857 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 FOXR1Q6PIV2 292 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 NLRP10Q86W26 655 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 BPIFA3Q9BQP9 254 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 TRIM6Q9C030 488 aaPredicted RBP12.29□□□□□ -0.44
SND1-201ENST00000354725 VEZTQ9HBM0 779 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 MKRN1Q9UHC7 482 aaKnown RBP12.29□□□□□ -0.44
SND1-201ENST00000354725 CFAP45Q9UL16 551 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 ZNF232Q9UNY5 417 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 ABCC12Q96J65 1359 aa12.29□□□□□ -0.44
SND1-201ENST00000354725 A0A087WUV0 522 aaPredicted RBP12.28□□□□□ -0.44
SND1-201ENST00000354725 RPS6KA5O75582 802 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 KCNA3P22001 575 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 HNRNPH1P31943 449 aaKnown RBP12.28□□□□□ -0.44
SND1-201ENST00000354725 ZNF165P49910 485 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 C11orf57Q6ZUT1 292 aaPredicted RBP12.28□□□□□ -0.44
SND1-201ENST00000354725 LRRC8AQ8IWT6 810 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 CENPOQ9BU64 300 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 A1CFQ9NQ94 594 aaKnown RBP12.28□□□□□ -0.44
SND1-201ENST00000354725 TFIP11Q9UBB9 837 aaKnown RBP12.28□□□□□ -0.44
SND1-201ENST00000354725 ADAM21Q9UKJ8 722 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 GCFC2P16383 781 aaKnown RBP12.28□□□□□ -0.44
SND1-201ENST00000354725 CCNHP51946 323 aaPredicted RBP12.28□□□□□ -0.44
SND1-201ENST00000354725 CCZ1BP86790 482 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 CCZ1P86791 482 aaPredicted RBP12.28□□□□□ -0.44
SND1-201ENST00000354725 SUSD4Q5VX71 490 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 H7C1W4 665 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 ZPR1O75312 459 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 TBC1D25Q3MII6 688 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 SLC10A5Q5PT55 438 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 ZMYM1Q5SVZ6 1142 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 MSL1Q68DK7 614 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 DHX32Q7L7V1 743 aaKnown RBP12.28□□□□□ -0.44
SND1-201ENST00000354725 DNAJC25Q9H1X3 360 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 ZBTB3Q9H5J0 574 aa12.28□□□□□ -0.44
SND1-201ENST00000354725 ANKRD65E5RJM6 399 aa12.27□□□□□ -0.44
SND1-201ENST00000354725 NEMFO60524 1076 aa12.27□□□□□ -0.44
SND1-201ENST00000354725 PPFIA2O75334 1257 aa12.27□□□□□ -0.44
SND1-201ENST00000354725 OATP04181 439 aa12.27□□□□□ -0.44
SND1-201ENST00000354725 BDNFP23560 247 aa12.27□□□□□ -0.44
SND1-201ENST00000354725 NEDD9Q14511 834 aa12.27□□□□□ -0.44
SND1-201ENST00000354725 CPLX2Q6PUV4 134 aaKnown RBP12.27□□□□□ -0.44
SND1-201ENST00000354725 TMCO3Q6UWJ1 677 aa12.27□□□□□ -0.44
SND1-201ENST00000354725 LRRC31Q6UY01 552 aa12.27□□□□□ -0.44
SND1-201ENST00000354725 HELBQ8NG08 1087 aaPredicted RBP12.27□□□□□ -0.44
SND1-201ENST00000354725 ZNF274Q96GC6 653 aaPredicted RBP12.27□□□□□ -0.44
SND1-201ENST00000354725 SEC62Q99442 399 aaKnown RBP12.27□□□□□ -0.44
SND1-201ENST00000354725 SLX4Q8IY92 1834 aa12.27□□□□□ -0.45
SND1-201ENST00000354725 ATP8B1O43520 1251 aa12.27□□□□□ -0.45
SND1-201ENST00000354725 MMP10P09238 476 aa12.27□□□□□ -0.45
SND1-201ENST00000354725 CC2D1AQ6P1N0 951 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms