RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 PNMA1Q8ND90 353 aa23.9■■□□□ 1.42
TRIM4-202ENST00000354241 CTCFLQ8NI51 663 aaPredicted RBP23.9■■□□□ 1.42
TRIM4-202ENST00000354241 MYOZ2Q9NPC6 264 aa23.9■■□□□ 1.42
TRIM4-202ENST00000354241 TAOK2Q9UL54 1235 aa23.9■■□□□ 1.42
TRIM4-202ENST00000354241 DICER1Q9UPY3 1922 aaKnown RBP23.9■■□□□ 1.42
TRIM4-202ENST00000354241 STK36Q9NRP7 1315 aa23.89■■□□□ 1.42
TRIM4-202ENST00000354241 TRIM22Q8IYM9 498 aa23.89■■□□□ 1.42
TRIM4-202ENST00000354241 ALG1Q9BT22 464 aa23.89■■□□□ 1.42
TRIM4-202ENST00000354241 VEZTQ9HBM0 779 aa23.89■■□□□ 1.42
TRIM4-202ENST00000354241 PLIN4Q96Q06 1357 aa23.89■■□□□ 1.41
TRIM4-202ENST00000354241 MYO1BO43795 1136 aa23.88■■□□□ 1.41
TRIM4-202ENST00000354241 GMPSP49915 693 aaPredicted RBP23.88■■□□□ 1.41
TRIM4-202ENST00000354241 CEP95Q96GE4 821 aa23.88■■□□□ 1.41
TRIM4-202ENST00000354241 TMEM47Q9BQJ4 181 aa23.88■■□□□ 1.41
TRIM4-202ENST00000354241 COL2A1P02458 1487 aaPredicted RBP23.88■■□□□ 1.41
TRIM4-202ENST00000354241 ATRNL1Q5VV63 1379 aa23.88■■□□□ 1.41
TRIM4-202ENST00000354241 FAM196BA6NMK8 535 aa23.88■■□□□ 1.41
TRIM4-202ENST00000354241 NCLP19338 710 aaKnown RBP23.88■■□□□ 1.41
TRIM4-202ENST00000354241 OTUD7BQ6GQQ9 843 aa23.88■■□□□ 1.41
TRIM4-202ENST00000354241 NBPF11Q86T75 865 aa23.88■■□□□ 1.41
TRIM4-202ENST00000354241 AIFM3Q96NN9 605 aa23.88■■□□□ 1.41
TRIM4-202ENST00000354241 DNAJC18Q9H819 358 aa23.88■■□□□ 1.41
TRIM4-202ENST00000354241 ZNF541Q9H0D2 1346 aa23.87■■□□□ 1.41
TRIM4-202ENST00000354241 TRAK2O60296 914 aa23.87■■□□□ 1.41
TRIM4-202ENST00000354241 PRPF40AO75400 957 aaKnown RBP23.87■■□□□ 1.41
TRIM4-202ENST00000354241 SBF1O95248 1867 aa23.87■■□□□ 1.41
TRIM4-202ENST00000354241 DNM1Q05193 864 aaKnown RBP23.87■■□□□ 1.41
TRIM4-202ENST00000354241 RESTQ13127 1097 aa23.87■■□□□ 1.41
TRIM4-202ENST00000354241 CNPY2Q9Y2B0 182 aa23.87■■□□□ 1.41
TRIM4-202ENST00000354241 MPHOSPH10O00566 681 aaKnown RBP23.86■■□□□ 1.41
TRIM4-202ENST00000354241 WNT10BO00744 389 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 PLEKHA8P1O95397 391 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 LMNB1P20700 586 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 RBM26Q5T8P6 1007 aaKnown RBP23.86■■□□□ 1.41
TRIM4-202ENST00000354241 FOXP4Q8IVH2 680 aaPredicted RBP23.86■■□□□ 1.41
TRIM4-202ENST00000354241 ZBED3Q96IU2 234 aaPredicted RBP23.86■■□□□ 1.41
TRIM4-202ENST00000354241 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.86■■□□□ 1.41
TRIM4-202ENST00000354241 ZSCAN16Q9H4T2 348 aaPredicted RBP23.86■■□□□ 1.41
TRIM4-202ENST00000354241 LMBRD1Q9NUN5 540 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 MTMR7Q9Y216 660 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 UBE2Q2LH0YL09 131 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 MMP14P50281 582 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 ZNF280AP59817 542 aaPredicted RBP23.86■■□□□ 1.41
TRIM4-202ENST00000354241 NBPF9Q3BBW0 867 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 FAM173BQ6P4H8 233 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 FAM151AQ8WW52 585 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 WASF1Q92558 559 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 CSRNP1Q96S65 589 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 GDPD2Q9HCC8 539 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 GJB4Q9NTQ9 266 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 MYH15Q9Y2K3 1946 aa23.86■■□□□ 1.41
TRIM4-202ENST00000354241 TMTC3Q6ZXV5 915 aa23.85■■□□□ 1.41
TRIM4-202ENST00000354241 MICALL2Q8IY33 904 aa23.85■■□□□ 1.41
TRIM4-202ENST00000354241 FBXO18Q8NFZ0 1043 aa23.85■■□□□ 1.41
TRIM4-202ENST00000354241 CNTNAP1P78357 1384 aa23.85■■□□□ 1.41
TRIM4-202ENST00000354241 GREB1LQ9C091 1923 aaPredicted RBP23.85■■□□□ 1.41
TRIM4-202ENST00000354241 TOP1P11387 765 aaKnown RBP23.84■■□□□ 1.41
TRIM4-202ENST00000354241 KIF5BP33176 963 aa23.84■■□□□ 1.41
TRIM4-202ENST00000354241 AKAP17AQ02040 695 aaKnown RBP23.84■■□□□ 1.41
TRIM4-202ENST00000354241 DPF2Q92785 391 aa23.84■■□□□ 1.41
TRIM4-202ENST00000354241 CCDC17Q96LX7 622 aa23.84■■□□□ 1.41
TRIM4-202ENST00000354241 DEXIO95424 95 aa23.84■■□□□ 1.41
TRIM4-202ENST00000354241 GUCY1A2P33402 732 aa23.84■■□□□ 1.41
TRIM4-202ENST00000354241 RNF26Q9BY78 433 aaPredicted RBP23.84■■□□□ 1.41
TRIM4-202ENST00000354241 MTMR4Q9NYA4 1195 aa23.84■■□□□ 1.41
TRIM4-202ENST00000354241 CNOT7Q9UIV1 285 aaKnown RBP23.84■■□□□ 1.41
TRIM4-202ENST00000354241 IGKV6D-41A0A0C4DH26 115 aa23.83■■□□□ 1.41
TRIM4-202ENST00000354241 TRIM29Q14134 588 aa23.83■■□□□ 1.41
TRIM4-202ENST00000354241 GRM4Q14833 912 aa23.83■■□□□ 1.41
TRIM4-202ENST00000354241 CERKLQ49MI3 558 aaPredicted RBP23.83■■□□□ 1.41
TRIM4-202ENST00000354241 FKBP1CQ5VVH2 108 aa23.83■■□□□ 1.41
TRIM4-202ENST00000354241 MAP3K14Q99558 947 aa23.83■■□□□ 1.41
TRIM4-202ENST00000354241 FIBPO43427 364 aa23.82■■□□□ 1.4
TRIM4-202ENST00000354241 NOVP48745 357 aa23.82■■□□□ 1.4
TRIM4-202ENST00000354241 FUT2Q10981 343 aa23.82■■□□□ 1.4
TRIM4-202ENST00000354241 CLEC10AQ8IUN9 316 aa23.82■■□□□ 1.4
TRIM4-202ENST00000354241 MYH4Q9Y623 1939 aa23.82■■□□□ 1.4
TRIM4-202ENST00000354241 EGFRP00533 1210 aa23.82■■□□□ 1.4
TRIM4-202ENST00000354241 SKOR2Q2VWA4 1001 aaPredicted RBP23.82■■□□□ 1.4
TRIM4-202ENST00000354241 USP48Q86UV5 1035 aa23.82■■□□□ 1.4
TRIM4-202ENST00000354241 SRBD1Q8N5C6 995 aaKnown RBP23.82■■□□□ 1.4
TRIM4-202ENST00000354241 CNTNAP5Q8WYK1 1306 aa23.81■■□□□ 1.4
TRIM4-202ENST00000354241 KRT85P78386 507 aa23.81■■□□□ 1.4
TRIM4-202ENST00000354241 TBC1D10BQ4KMP7 808 aaPredicted RBP23.81■■□□□ 1.4
TRIM4-202ENST00000354241 KRT40Q6A162 431 aa23.81■■□□□ 1.4
TRIM4-202ENST00000354241 TATDN1Q6P1N9 297 aa23.81■■□□□ 1.4
TRIM4-202ENST00000354241 SAMD7Q7Z3H4 446 aa23.81■■□□□ 1.4
TRIM4-202ENST00000354241 METTL16Q86W50 562 aaKnown RBP23.81■■□□□ 1.4
TRIM4-202ENST00000354241 PRPF3O43395 683 aaKnown RBP23.8■■□□□ 1.4
TRIM4-202ENST00000354241 TTLL1O95922 423 aa23.8■■□□□ 1.4
TRIM4-202ENST00000354241 YBX3P16989 372 aaKnown RBP eCLIP23.8■■□□□ 1.4
TRIM4-202ENST00000354241 FAM83AQ86UY5 434 aa23.8■■□□□ 1.4
TRIM4-202ENST00000354241 STAG2Q8N3U4 1231 aa23.8■■□□□ 1.4
TRIM4-202ENST00000354241 RGS22Q8NE09 1264 aa23.8■■□□□ 1.4
TRIM4-202ENST00000354241 TMEM39BQ9GZU3 492 aa23.8■■□□□ 1.4
TRIM4-202ENST00000354241 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.8■■□□□ 1.4
TRIM4-202ENST00000354241 CLIP2Q9UDT6 1046 aa23.8■■□□□ 1.4
TRIM4-202ENST00000354241 MAD2L2Q9UI95 211 aa23.8■■□□□ 1.4
TRIM4-202ENST00000354241 DDX49Q9Y6V7 483 aaKnown RBP23.8■■□□□ 1.4
TRIM4-202ENST00000354241 V9GY48 417 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms