RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 NUF2Q9BZD4 464 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 CCDC87Q9NVE4 849 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 TTF2Q9UNY4 1162 aaKnown RBP11.09□□□□□ -0.63
COL11A1-201ENST00000353414 STK38LQ9Y2H1 464 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 FIS1Q9Y3D6 152 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 NOLC1Q14978 699 aaKnown RBP eCLIP11.08□□□□□ -0.63
COL11A1-201ENST00000353414 SPICE1Q8N0Z3 855 aa11.08□□□□□ -0.63
COL11A1-201ENST00000353414 ANKRD42Q8N9B4 389 aa11.08□□□□□ -0.63
COL11A1-201ENST00000353414 TTC14Q96N46 770 aa11.08□□□□□ -0.63
COL11A1-201ENST00000353414 BMP15O95972 392 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 GPR161Q8N6U8 529 aaKnown RBP11.08□□□□□ -0.64
COL11A1-201ENST00000353414 GOLGA8HP0CJ92 632 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 MICAL1Q8TDZ2 1067 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 DDX27Q96GQ7 796 aaKnown RBP11.08□□□□□ -0.64
COL11A1-201ENST00000353414 VPS37BQ9H9H4 285 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 STIM2Q9P246 746 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 EIF4G3O43432 1585 aaKnown RBP11.08□□□□□ -0.64
COL11A1-201ENST00000353414 PLCH2O75038 1416 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 CTAGE3PQ8IX95 158 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 UHMK1Q8TAS1 419 aaKnown RBP11.08□□□□□ -0.64
COL11A1-201ENST00000353414 RTEL1Q9NZ71 1219 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 VPS54Q9P1Q0 977 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 MOSPD1Q9UJG1 213 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 TRIM35Q9UPQ4 493 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
COL11A1-201ENST00000353414 PTPN23Q9H3S7 1636 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 NEDD9Q14511 834 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 BRD3Q15059 726 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 LLGL1Q15334 1064 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 SKIV2LQ15477 1246 aaKnown RBP11.08□□□□□ -0.64
COL11A1-201ENST00000353414 DPY19L2Q6NUT2 758 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 FAM173BQ6P4H8 233 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 GSTA1P08263 222 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 GSTA2P09210 222 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 MYLK4Q86YV6 388 aaPredicted RBP11.08□□□□□ -0.64
COL11A1-201ENST00000353414 TAB2Q9NYJ8 693 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 DNM3Q9UQ16 869 aa11.08□□□□□ -0.64
COL11A1-201ENST00000353414 CSGALNACT2Q8N6G5 542 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 CCDC26Q8TAB7 109 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 TSGA10Q9BZW7 698 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 INPP5FQ9Y2H2 1132 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 NOC2LQ9Y3T9 749 aaKnown RBP11.07□□□□□ -0.64
COL11A1-201ENST00000353414 VGLL3A8MV65 326 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 AKR1B15C9JRZ8 316 aaPredicted RBP11.07□□□□□ -0.64
COL11A1-201ENST00000353414 NKX1-1Q15270 411 aaPredicted RBP11.07□□□□□ -0.64
COL11A1-201ENST00000353414 RSAD2Q8WXG1 361 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 DDX21Q9NR30 783 aaKnown RBP eCLIP11.07□□□□□ -0.64
COL11A1-201ENST00000353414 CEP104O60308 925 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 ZNF772Q68DY9 489 aaPredicted RBP11.07□□□□□ -0.64
COL11A1-201ENST00000353414 MRPL50Q8N5N7 158 aaKnown RBP11.07□□□□□ -0.64
COL11A1-201ENST00000353414 DEPTORQ8TB45 409 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 NLRC4Q9NPP4 1024 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 PRKAG2Q9UGJ0 569 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 FYB2Q5VWT5 728 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 TTBK2Q6IQ55 1244 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 IGSF22Q8N9C0 903 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 IQUBQ8NA54 791 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 AKT3Q9Y243 479 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 RNMTO43148 476 aaKnown RBP11.07□□□□□ -0.64
COL11A1-201ENST00000353414 ATF7P17544 494 aaPredicted RBP11.07□□□□□ -0.64
COL11A1-201ENST00000353414 ATP8B2P98198 1209 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 CCDC105Q8IYK2 499 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 TRMT44Q8IYL2 757 aaKnown RBP11.07□□□□□ -0.64
COL11A1-201ENST00000353414 ANKRD35Q8N283 1001 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 EEF2KMTQ96G04 330 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 BAG1Q99933 345 aaPredicted RBP11.07□□□□□ -0.64
COL11A1-201ENST00000353414 TNNC1P63316 161 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 UBN1Q9NPG3 1134 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 PCDHB15Q9Y5E8 787 aa11.07□□□□□ -0.64
COL11A1-201ENST00000353414 CAPN15O75808 1086 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 IFNB1P01574 187 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 KRT15P19012 456 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 TECP42680 631 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 VAV2P52735 878 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 PUM3Q15397 648 aaKnown RBP11.06□□□□□ -0.64
COL11A1-201ENST00000353414 TYW1BQ6NUM6 668 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 DPP9Q86TI2 863 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 TRIM50Q86XT4 487 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 NR1I2O75469 434 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 ADCY7P51828 1080 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 PPP2R3AQ06190 1150 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 PRR16Q569H4 304 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 NLRX1Q86UT6 975 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 UBL4BQ8N7F7 174 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 RNASELQ05823 741 aaKnown RBP11.06□□□□□ -0.64
COL11A1-201ENST00000353414 HHATQ5VTY9 493 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 G2E3Q7L622 706 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 CDC26Q8NHZ8 85 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 TSR3Q9UJK0 312 aaKnown RBP11.06□□□□□ -0.64
COL11A1-201ENST00000353414 EXOC7Q9UPT5 735 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 ABCC11Q96J66 1382 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 MCUQ8NE86 351 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 NUCKS1Q9H1E3 243 aaKnown RBP11.06□□□□□ -0.64
COL11A1-201ENST00000353414 DISC1Q9NRI5 854 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 CPSF2Q9P2I0 782 aaKnown RBP11.06□□□□□ -0.64
COL11A1-201ENST00000353414 KDRP35968 1356 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 ATP11AP98196 1134 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 MYSM1Q5VVJ2 828 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 CNNM4Q6P4Q7 775 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms