RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TUBB4AP04350 444 aa20.62■□□□□ 0.89
PTP4A3-202ENST00000349124 RBL2Q08999 1139 aa20.62■□□□□ 0.89
PTP4A3-202ENST00000349124 DPYDQ12882 1025 aa20.62■□□□□ 0.89
PTP4A3-202ENST00000349124 LZTFL1Q9NQ48 299 aa20.62■□□□□ 0.89
PTP4A3-202ENST00000349124 ECM29Q5VYK3 1845 aa20.62■□□□□ 0.89
PTP4A3-202ENST00000349124 CAMTA2O94983 1202 aa20.62■□□□□ 0.89
PTP4A3-202ENST00000349124 SLC4A8Q2Y0W8 1093 aa20.62■□□□□ 0.89
PTP4A3-202ENST00000349124 ZSCAN10Q96SZ4 725 aaPredicted RBP20.62■□□□□ 0.89
PTP4A3-202ENST00000349124 BLZF1Q9H2G9 400 aa20.62■□□□□ 0.89
PTP4A3-202ENST00000349124 NID2Q14112 1375 aa20.62■□□□□ 0.89
PTP4A3-202ENST00000349124 RIOK1Q9BRS2 568 aaKnown RBP20.62■□□□□ 0.89
PTP4A3-202ENST00000349124 PHF20Q9BVI0 1012 aa20.62■□□□□ 0.89
PTP4A3-202ENST00000349124 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 MYO1BO43795 1136 aa20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 MAP3K9P80192 1104 aa20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 ITPK1Q13572 414 aa20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 RAD9BQ6WBX8 426 aa20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 FCHSD1Q86WN1 690 aa20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 RNF26Q9BY78 433 aaPredicted RBP20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 CCDC87Q9NVE4 849 aa20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 CEP131Q9UPN4 1083 aa20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 A0A1B0GTH6 734 aa20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 ZRANB2O95218 330 aaKnown RBP eCLIP20.61■□□□□ 0.891e-6■■■■□ 20.5
PTP4A3-202ENST00000349124 NTSR2O95665 410 aa20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 NPY5RQ15761 445 aa20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 TEX35Q5T0J7 233 aa20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 IFIT1BQ5T764 474 aaKnown RBP20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 KIFC2Q96AC6 838 aa20.61■□□□□ 0.89
PTP4A3-202ENST00000349124 NUP98P52948 1817 aa20.6■□□□□ 0.89
PTP4A3-202ENST00000349124 KRT2P35908 639 aa20.6■□□□□ 0.89
PTP4A3-202ENST00000349124 AATFQ9NY61 560 aaKnown RBP eCLIP20.6■□□□□ 0.896e-8■■■■□ 22.8
PTP4A3-202ENST00000349124 DACH1Q9UI36 760 aa20.6■□□□□ 0.89
PTP4A3-202ENST00000349124 COL4A1P02462 1669 aa20.6■□□□□ 0.89
PTP4A3-202ENST00000349124 ERICH4A6NGS2 130 aa20.6■□□□□ 0.89
PTP4A3-202ENST00000349124 ABL1P00519 1130 aa20.6■□□□□ 0.89
PTP4A3-202ENST00000349124 TFRCP02786 760 aaKnown RBP20.6■□□□□ 0.89
PTP4A3-202ENST00000349124 CDC25AP30304 524 aa20.6■□□□□ 0.89
PTP4A3-202ENST00000349124 CUL4BQ13620 913 aa20.6■□□□□ 0.89
PTP4A3-202ENST00000349124 FAM47AQ5JRC9 791 aa20.6■□□□□ 0.89
PTP4A3-202ENST00000349124 CREBRFQ8IUR6 639 aa20.6■□□□□ 0.89
PTP4A3-202ENST00000349124 IGSF22Q8N9C0 903 aa20.6■□□□□ 0.89
PTP4A3-202ENST00000349124 KCNQ4P56696 695 aa20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 TROAPQ12815 778 aa20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 PTGDRQ13258 359 aa20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 TMCO3Q6UWJ1 677 aa20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 TRIML1Q8N9V2 468 aa20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 EFCAB8A8MWE9 144 aa20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 PPP1R3GB7ZBB8 358 aa20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 USP17L12C9JPN9 530 aa20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 AKR1B15C9JRZ8 316 aaPredicted RBP20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 USP17L21D6R901 530 aa20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 KLRK1P26718 216 aa20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 ERCC5P28715 1186 aaPredicted RBP20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 KANK3Q6NY19 840 aa20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 SH3RF1Q7Z6J0 888 aa20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 XIRP1Q702N8 1843 aaKnown RBP20.59■□□□□ 0.89
PTP4A3-202ENST00000349124 MYH3P11055 1940 aa20.58■□□□□ 0.89
PTP4A3-202ENST00000349124 SASH3O75995 380 aa20.58■□□□□ 0.89
PTP4A3-202ENST00000349124 CCT6AP40227 531 aaKnown RBP20.58■□□□□ 0.89
PTP4A3-202ENST00000349124 PPP2R3AQ06190 1150 aa20.58■□□□□ 0.89
PTP4A3-202ENST00000349124 SPATA1Q5VX52 437 aa20.58■□□□□ 0.89
PTP4A3-202ENST00000349124 SRBD1Q8N5C6 995 aaKnown RBP20.58■□□□□ 0.89
PTP4A3-202ENST00000349124 AK7Q96M32 723 aa20.58■□□□□ 0.89
PTP4A3-202ENST00000349124 ZCCHC17Q9NP64 241 aaKnown RBP20.58■□□□□ 0.89
PTP4A3-202ENST00000349124 JAG2Q9Y219 1238 aa20.58■□□□□ 0.89
PTP4A3-202ENST00000349124 MRFAP1Q9Y605 127 aa20.58■□□□□ 0.89
PTP4A3-202ENST00000349124 POLR3GO15318 223 aaPredicted RBP20.58■□□□□ 0.88
PTP4A3-202ENST00000349124 CATIPQ7Z7H3 387 aa20.58■□□□□ 0.88
PTP4A3-202ENST00000349124 CCDC12Q8WUD4 166 aaPredicted RBP20.58■□□□□ 0.88
PTP4A3-202ENST00000349124 ADD3Q9UEY8 706 aaKnown RBP20.58■□□□□ 0.88
PTP4A3-202ENST00000349124 MAPK8IP1Q9UQF2 711 aa20.58■□□□□ 0.88
PTP4A3-202ENST00000349124 ITGB4P16144 1822 aa20.58■□□□□ 0.88
PTP4A3-202ENST00000349124 RNF225M0QZC1 329 aaPredicted RBP20.57■□□□□ 0.88
PTP4A3-202ENST00000349124 PRPF3O43395 683 aaKnown RBP20.57■□□□□ 0.88
PTP4A3-202ENST00000349124 CTR9Q6PD62 1173 aa20.57■□□□□ 0.88
PTP4A3-202ENST00000349124 MTRQ99707 1265 aa20.57■□□□□ 0.88
PTP4A3-202ENST00000349124 IL17AQ16552 155 aa20.57■□□□□ 0.88
PTP4A3-202ENST00000349124 SRRTQ9BXP5 876 aaKnown RBP20.57■□□□□ 0.88
PTP4A3-202ENST00000349124 ANAPC4Q9UJX5 808 aa20.57■□□□□ 0.88
PTP4A3-202ENST00000349124 LOC102724428A0A0B4J2F2 783 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 CYP2D6P10635 497 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 CASP14P31944 242 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 FXR1P51114 621 aaKnown RBP eCLIP20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 SIK1P57059 783 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 BICDL1Q6ZP65 573 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 PIK3AP1Q6ZUJ8 805 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 SYNRGQ9UMZ2 1314 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 COL1A1P02452 1464 aaPredicted RBP20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 XBP1P17861 261 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 ERFEQ4G0M1 354 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 TTC38Q5R3I4 469 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 TNFRSF25Q93038 417 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 NOL10Q9BSC4 688 aaKnown RBP20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 CTNND2Q9UQB3 1225 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 ADGRG1Q9Y653 693 aa20.56■□□□□ 0.88
PTP4A3-202ENST00000349124 MCM7P33993 719 aa20.55■□□□□ 0.88
PTP4A3-202ENST00000349124 PPFIBP1Q86W92 1011 aa20.55■□□□□ 0.88
PTP4A3-202ENST00000349124 PARD6BQ9BYG5 372 aa20.55■□□□□ 0.88
PTP4A3-202ENST00000349124 XDHP47989 1333 aa20.55■□□□□ 0.88
PTP4A3-202ENST00000349124 DISP2A7MBM2 1401 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms