RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 ALDH3A1P30838 453 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 GCKRQ14397 625 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 HYOU1Q9Y4L1 999 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 MRFAP1Q9Y605 127 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 CCNT1O60563 726 aaKnown RBP5.33□□□□□ -1.56
CSMD3-203ENST00000343508 CTNNA2P26232 953 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 LRCH2Q5VUJ6 765 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 CCDC170Q8IYT3 715 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 SLC35F6Q8N357 371 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 DESI2Q9BSY9 194 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 ADGRL3Q9HAR2 1447 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 SNCBQ16143 134 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 ALS2CLQ60I27 953 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 CACNA2D3Q8IZS8 1091 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 RUBCNQ92622 972 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 RNF14Q9UBS8 474 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 EIF3CLB5ME19 914 aaKnown RBP5.33□□□□□ -1.56
CSMD3-203ENST00000343508 CASP14P31944 242 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 CCT5P48643 541 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 CCDC38Q502W7 563 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 EIF3CQ99613 913 aaKnown RBP5.33□□□□□ -1.56
CSMD3-203ENST00000343508 EHMT1Q9H9B1 1298 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 NEURL1BA8MQ27 555 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 TIMM10P62072 90 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 DENND2CQ68D51 928 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 ZBTB9Q96C00 473 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 EAF2Q96CJ1 260 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-203ENST00000343508 SIRT1Q96EB6 747 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 RRP36Q96EU6 259 aaKnown RBP5.33□□□□□ -1.56
CSMD3-203ENST00000343508 XAGE2Q96GT9 111 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 PPRC1Q5VV67 1664 aaKnown RBP5.33□□□□□ -1.56
CSMD3-203ENST00000343508 RPL13P26373 211 aaKnown RBP5.33□□□□□ -1.56
CSMD3-203ENST00000343508 ICE2Q659A1 982 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 INTS8Q75QN2 995 aaKnown RBP5.33□□□□□ -1.56
CSMD3-203ENST00000343508 VIPAS39Q9H9C1 493 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.33□□□□□ -1.56
CSMD3-203ENST00000343508 MYL1P05976 194 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 VIMP08670 466 aaKnown RBP5.33□□□□□ -1.56
CSMD3-203ENST00000343508 CYP21A2P08686 494 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 CYP7A1P22680 504 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 SERTAD1Q9UHV2 236 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 PRDM4Q9UKN5 801 aa5.33□□□□□ -1.56
CSMD3-203ENST00000343508 NDC80O14777 642 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 MORC3Q14149 939 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 KRT79Q5XKE5 535 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 UBL4BQ8N7F7 174 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 PAIP2Q9BPZ3 127 aaKnown RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 PPP1R7Q15435 360 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 SND1Q7KZF4 910 aaKnown RBP eCLIP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 TADA2BQ86TJ2 420 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 TRMT44Q8IYL2 757 aaKnown RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 NSUN7Q8NE18 718 aaKnown RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 STMN2Q93045 179 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 IQCGQ9H095 443 aaKnown RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 TULP4Q9NRJ4 1543 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 ARID5AQ03989 594 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 SLMAPQ14BN4 828 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 CC2D1AQ6P1N0 951 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 SYCP3Q8IZU3 236 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 ENOX1Q8TC92 643 aaKnown RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 CUL5Q93034 780 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 ACTR5Q9H9F9 607 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 DLC1Q96QB1 1528 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 RFX7Q2KHR2 1363 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 MPHOSPH10O00566 681 aaKnown RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 LIG3P49916 1009 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 ERMNQ8TAM6 284 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 PRDM11Q9NQV5 511 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 FGAP02671 866 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 ZNF174Q15697 407 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 TSNAXIP1Q2TAA8 658 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 ANKIB1Q9P2G1 1089 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 SOWAHDA6NJG2 315 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 EEF1GP26641 437 aaKnown RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 CCDC144BQ3MJ40 725 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 ZKSCAN3Q9BRR0 538 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 SEMA3EO15041 775 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 NAPAP54920 295 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 TTC38Q5R3I4 469 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 MMS22LQ6ZRQ5 1243 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 C2CD5Q86YS7 1000 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 BANK1Q8NDB2 785 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 JARID2Q92833 1246 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 ABCC3O15438 1527 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 NRKQ7Z2Y5 1582 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 LDHCP07864 332 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 SF3B2Q13435 895 aaKnown RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 FNBP4Q8N3X1 1017 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 SEC62Q99442 399 aaKnown RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 GPR108Q9NPR9 543 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 RWDD2AQ9UIY3 292 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 LARGE1O95461 756 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 GLE1Q53GS7 698 aaKnown RBP5.32□□□□□ -1.56
CSMD3-203ENST00000343508 SEL1L2Q5TEA6 688 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 FYB2Q5VWT5 728 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 VEZTQ9HBM0 779 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 HOMER3Q9NSC5 361 aa5.32□□□□□ -1.56
CSMD3-203ENST00000343508 PPFIBP2Q8ND30 876 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms