RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 NPY5RQ15761 445 aa23.06■■□□□ 1.28
SPG7-202ENST00000341316 SBK1Q52WX2 424 aa23.06■■□□□ 1.28
SPG7-202ENST00000341316 SRPRBQ9Y5M8 271 aaKnown RBP23.06■■□□□ 1.28
SPG7-202ENST00000341316 KIAA1551Q9HCM1 1747 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 USP27XA6NNY8 438 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 POLR2DO15514 142 aaKnown RBP23.05■■□□□ 1.28
SPG7-202ENST00000341316 DDAH1O94760 285 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 SKILP12757 684 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 DZIP1Q86YF9 867 aaKnown RBP23.05■■□□□ 1.28
SPG7-202ENST00000341316 CCDC112Q8NEF3 446 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 LRRC4BQ9NT99 713 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 ARPP21Q9UBL0 812 aaPredicted RBP23.05■■□□□ 1.28
SPG7-202ENST00000341316 LY75O60449 1722 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 MYH6P13533 1939 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 NEMFO60524 1076 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 PRR29P0C7W0 189 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 CALM1P0DP23 149 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 CALM2P0DP24 149 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 CALM3P0DP25 149 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 KRT2P35908 639 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 GRAPQ13588 217 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 GRAPLQ8TC17 118 aaPredicted RBP23.05■■□□□ 1.28
SPG7-202ENST00000341316 CSRNP2Q9H175 543 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 SERTAD1Q9UHV2 236 aa23.05■■□□□ 1.28
SPG7-202ENST00000341316 CNTNAP5Q8WYK1 1306 aa23.04■■□□□ 1.28
SPG7-202ENST00000341316 PDE4BQ07343 736 aa23.04■■□□□ 1.28
SPG7-202ENST00000341316 SYCP1Q15431 976 aa23.04■■□□□ 1.28
SPG7-202ENST00000341316 CEP135Q66GS9 1140 aa23.04■■□□□ 1.28
SPG7-202ENST00000341316 ZNF579Q8NAF0 562 aaKnown RBP23.04■■□□□ 1.28
SPG7-202ENST00000341316 ZNF592Q92610 1267 aa23.04■■□□□ 1.28
SPG7-202ENST00000341316 OSBPL5Q9H0X9 879 aaPredicted RBP23.04■■□□□ 1.28
SPG7-202ENST00000341316 MCM9Q9NXL9 1143 aa23.04■■□□□ 1.28
SPG7-202ENST00000341316 MKRN1Q9UHC7 482 aaKnown RBP23.04■■□□□ 1.28
SPG7-202ENST00000341316 MAST2Q6P0Q8 1798 aa23.04■■□□□ 1.28
SPG7-202ENST00000341316 LAMB1P07942 1786 aa23.04■■□□□ 1.28
SPG7-202ENST00000341316 VEGFAP15692 232 aaPredicted RBP23.03■■□□□ 1.28
SPG7-202ENST00000341316 XBP1P17861 261 aa23.03■■□□□ 1.28
SPG7-202ENST00000341316 DMTNQ08495 405 aa23.03■■□□□ 1.28
SPG7-202ENST00000341316 RCSD1Q6JBY9 416 aa23.03■■□□□ 1.28
SPG7-202ENST00000341316 GRAMD1CQ8IYS0 662 aa23.03■■□□□ 1.28
SPG7-202ENST00000341316 FANCCQ00597 558 aa23.03■■□□□ 1.28
SPG7-202ENST00000341316 NAA30Q147X3 362 aaPredicted RBP23.03■■□□□ 1.28
SPG7-202ENST00000341316 TNFRSF25Q93038 417 aa23.03■■□□□ 1.28
SPG7-202ENST00000341316 DIXDC1Q155Q3 683 aa23.02■■□□□ 1.28
SPG7-202ENST00000341316 TMC6Q7Z403 805 aa23.02■■□□□ 1.28
SPG7-202ENST00000341316 ELOA2Q8IYF1 753 aaPredicted RBP23.02■■□□□ 1.28
SPG7-202ENST00000341316 PDILTQ8N807 584 aa23.02■■□□□ 1.28
SPG7-202ENST00000341316 CNBD1Q8NA66 436 aa23.02■■□□□ 1.28
SPG7-202ENST00000341316 SBF2Q86WG5 1849 aa23.02■■□□□ 1.28
SPG7-202ENST00000341316 TPM4P67936 248 aa23.02■■□□□ 1.28
SPG7-202ENST00000341316 MYL5Q02045 173 aa23.02■■□□□ 1.28
SPG7-202ENST00000341316 POSTNQ15063 836 aa23.02■■□□□ 1.28
SPG7-202ENST00000341316 SPTY2D1Q68D10 685 aaPredicted RBP23.02■■□□□ 1.28
SPG7-202ENST00000341316 SH3RF3Q8TEJ3 882 aaPredicted RBP23.02■■□□□ 1.28
SPG7-202ENST00000341316 MAN1B1Q9UKM7 699 aa23.02■■□□□ 1.28
SPG7-202ENST00000341316 CEP131Q9UPN4 1083 aa23.02■■□□□ 1.28
SPG7-202ENST00000341316 TRIM75PA6NK02 468 aa23.01■■□□□ 1.27
SPG7-202ENST00000341316 TSPY2A6NKD2 308 aa23.01■■□□□ 1.27
SPG7-202ENST00000341316 LDHBP07195 334 aaKnown RBP23.01■■□□□ 1.27
SPG7-202ENST00000341316 ARMCX5Q6P1M9 558 aa23.01■■□□□ 1.27
SPG7-202ENST00000341316 DPF2Q92785 391 aa23.01■■□□□ 1.27
SPG7-202ENST00000341316 DYNLL2Q96FJ2 89 aa23.01■■□□□ 1.27
SPG7-202ENST00000341316 GJD4Q96KN9 370 aaPredicted RBP23.01■■□□□ 1.27
SPG7-202ENST00000341316 IMPACTQ9P2X3 320 aa23.01■■□□□ 1.27
SPG7-202ENST00000341316 LEMD3Q9Y2U8 911 aa23.01■■□□□ 1.27
SPG7-202ENST00000341316 ADAMTS3O15072 1205 aa23.01■■□□□ 1.27
SPG7-202ENST00000341316 ZBTB22O15209 634 aa23.01■■□□□ 1.27
SPG7-202ENST00000341316 ACTN4O43707 911 aaKnown RBP23.01■■□□□ 1.27
SPG7-202ENST00000341316 CTCFLQ8NI51 663 aaPredicted RBP23.01■■□□□ 1.27
SPG7-202ENST00000341316 IL17RBQ9NRM6 502 aa23.01■■□□□ 1.27
SPG7-202ENST00000341316 CCDC88AQ3V6T2 1871 aa23■■□□□ 1.27
SPG7-202ENST00000341316 A0A087X0B3 334 aa23■■□□□ 1.27
SPG7-202ENST00000341316 C12orf60Q5U649 245 aa23■■□□□ 1.27
SPG7-202ENST00000341316 PRR5LQ6MZQ0 368 aa23■■□□□ 1.27
SPG7-202ENST00000341316 SARSP49591 514 aaKnown RBP22.99■■□□□ 1.27
SPG7-202ENST00000341316 GSDMDP57764 484 aa22.99■■□□□ 1.27
SPG7-202ENST00000341316 UTP14CQ5TAP6 766 aaKnown RBP22.99■■□□□ 1.27
SPG7-202ENST00000341316 WDR66Q8TBY9 1149 aa22.99■■□□□ 1.27
SPG7-202ENST00000341316 XDHP47989 1333 aa22.99■■□□□ 1.27
SPG7-202ENST00000341316 NT5DC1Q5TFE4 455 aa22.99■■□□□ 1.27
SPG7-202ENST00000341316 OLFM4Q6UX06 510 aa22.99■■□□□ 1.27
SPG7-202ENST00000341316 NYAP1Q6ZVC0 841 aa22.99■■□□□ 1.27
SPG7-202ENST00000341316 EPSTI1Q96J88 318 aa22.99■■□□□ 1.27
SPG7-202ENST00000341316 FANCLQ9NW38 375 aa22.99■■□□□ 1.27
SPG7-202ENST00000341316 SPATA31A6Q5VVP1 1343 aa22.98■■□□□ 1.27
SPG7-202ENST00000341316 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.98■■□□□ 1.27
SPG7-202ENST00000341316 USP5P45974 858 aa22.98■■□□□ 1.27
SPG7-202ENST00000341316 GPSM2P81274 684 aa22.98■■□□□ 1.27
SPG7-202ENST00000341316 TFAP4Q01664 338 aa22.98■■□□□ 1.27
SPG7-202ENST00000341316 PTPN14Q15678 1187 aa22.98■■□□□ 1.27
SPG7-202ENST00000341316 ZNF827Q17R98 1081 aa22.98■■□□□ 1.27
SPG7-202ENST00000341316 TMED8Q6PL24 325 aaPredicted RBP22.98■■□□□ 1.27
SPG7-202ENST00000341316 ZNF174Q15697 407 aa22.98■■□□□ 1.27
SPG7-202ENST00000341316 BCL11BQ9C0K0 894 aaPredicted RBP22.98■■□□□ 1.27
SPG7-202ENST00000341316 TRMT1Q9NXH9 659 aaKnown RBP22.98■■□□□ 1.27
SPG7-202ENST00000341316 MORC2Q9Y6X9 1032 aaPredicted RBP22.97■■□□□ 1.27
SPG7-202ENST00000341316 SCG2P13521 617 aa22.97■■□□□ 1.27
SPG7-202ENST00000341316 HOOK1Q9UJC3 728 aaKnown RBP22.97■■□□□ 1.27
SPG7-202ENST00000341316 FMR1Q06787 632 aaKnown RBP eCLIP22.96■■□□□ 1.27
SPG7-202ENST00000341316 MORC3Q14149 939 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms