RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 MAP3K14Q99558 947 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 CCNL1Q9UK58 526 aaPredicted RBP9.08□□□□□ -0.96
NBR1-201ENST00000341165 LAMA4Q16363 1823 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 LDHBP07195 334 aaKnown RBP9.07□□□□□ -0.96
NBR1-201ENST00000341165 ISM2Q6H9L7 571 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 SHC4Q6S5L8 630 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 FAM84BQ96KN1 310 aaPredicted RBP9.07□□□□□ -0.96
NBR1-201ENST00000341165 MYCBPQ99417 103 aaPredicted RBP9.07□□□□□ -0.96
NBR1-201ENST00000341165 CPSF2Q9P2I0 782 aaKnown RBP9.07□□□□□ -0.96
NBR1-201ENST00000341165 V9GY48 417 aaPredicted RBP9.07□□□□□ -0.96
NBR1-201ENST00000341165 MYH7P12883 1935 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 USP17L12C9JPN9 530 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 USP17L21D6R901 530 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 POLR2DO15514 142 aaKnown RBP9.07□□□□□ -0.96
NBR1-201ENST00000341165 TRAPPC10P48553 1259 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 CCDC148Q8NFR7 591 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 CLIC6Q96NY7 704 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 CTAGE1Q96RT6 745 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 TMX4Q9H1E5 349 aaPredicted RBP9.07□□□□□ -0.96
NBR1-201ENST00000341165 INCENPQ9NQS7 918 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 LEMD3Q9Y2U8 911 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 ROBO1Q9Y6N7 1651 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 TMCO5BA8MYB1 307 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 ORC4O43929 436 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 FBXO33Q7Z6M2 555 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 CCDC12Q8WUD4 166 aaPredicted RBP9.07□□□□□ -0.96
NBR1-201ENST00000341165 RPGRQ92834 1020 aaKnown RBP9.07□□□□□ -0.96
NBR1-201ENST00000341165 C8orf37Q96NL8 207 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 NUP98P52948 1817 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 VPS72Q15906 364 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 TRAPPC3LQ5T215 181 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 PDILTQ8N807 584 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 SENP2Q9HC62 589 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 RMND1Q9NWS8 449 aa9.07□□□□□ -0.96
NBR1-201ENST00000341165 AATFQ9NY61 560 aaKnown RBP eCLIP9.07□□□□□ -0.96
NBR1-201ENST00000341165 COL22A1Q8NFW1 1626 aaPredicted RBP9.06□□□□□ -0.96
NBR1-201ENST00000341165 PSDA5PKW4 1024 aaPredicted RBP9.06□□□□□ -0.96
NBR1-201ENST00000341165 POLR3GO15318 223 aaPredicted RBP9.06□□□□□ -0.96
NBR1-201ENST00000341165 PLCG2P16885 1265 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 KCNJ6P48051 423 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 LINC00116Q8NCU8 138 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 MNS1Q8NEH6 495 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 FAM217BQ9NTX9 383 aaPredicted RBP9.06□□□□□ -0.96
NBR1-201ENST00000341165 MCM9Q9NXL9 1143 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 LRP5O75197 1615 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 CCDC144BQ3MJ40 725 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 PPFIBP1Q86W92 1011 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 DYNLL1P63167 89 aaKnown RBP9.06□□□□□ -0.96
NBR1-201ENST00000341165 TTC38Q5R3I4 469 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 TBC1D9BQ66K14 1250 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 ENAHQ8N8S7 591 aaPredicted RBP9.06□□□□□ -0.96
NBR1-201ENST00000341165 LZTS2Q9BRK4 669 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 RASSF4Q9H2L5 321 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 PCDHA5Q9Y5H7 936 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 DOT1LQ8TEK3 1739 aa9.06□□□□□ -0.96
NBR1-201ENST00000341165 ST5P78524 1137 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 MECOMQ03112 1051 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 LONRF3Q496Y0 759 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 SBK1Q52WX2 424 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 IQUBQ8NA54 791 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 RIOK1Q9BRS2 568 aaKnown RBP9.05□□□□□ -0.96
NBR1-201ENST00000341165 TRMT1Q9NXH9 659 aaKnown RBP9.05□□□□□ -0.96
NBR1-201ENST00000341165 VPS54Q9P1Q0 977 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 SERTAD1Q9UHV2 236 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 MORC2Q9Y6X9 1032 aaPredicted RBP9.05□□□□□ -0.96
NBR1-201ENST00000341165 MROH7-TTC4A0A0A0MT08 1334 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 CCDC194A0A1B0GVG4 234 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 KCNQ2O43526 872 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 ERCC5P28715 1186 aaPredicted RBP9.05□□□□□ -0.96
NBR1-201ENST00000341165 CTR9Q6PD62 1173 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 SAMD1Q6SPF0 538 aaPredicted RBP9.05□□□□□ -0.96
NBR1-201ENST00000341165 CELF1Q92879 486 aaKnown RBP9.05□□□□□ -0.96
NBR1-201ENST00000341165 NSUN4Q96CB9 384 aaKnown RBP9.05□□□□□ -0.96
NBR1-201ENST00000341165 PRDM1O75626 825 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 TSPY3P0CV98 308 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 TSPY8P0CW00 308 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 STIM1Q13586 685 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 LRCH2Q5VUJ6 765 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 GALNT17Q6IS24 598 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 TMTC3Q6ZXV5 915 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 FCHSD1Q86WN1 690 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 DHX58Q96C10 678 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 TFCP2L1Q9NZI6 479 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 RSPH14Q9UHP6 348 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 SCG2P13521 617 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 NAP1L1P55209 391 aaKnown RBP9.05□□□□□ -0.96
NBR1-201ENST00000341165 SEC23AQ15436 765 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 CNBD1Q8NA66 436 aa9.05□□□□□ -0.96
NBR1-201ENST00000341165 FBXO2Q9UK22 296 aaPredicted RBP9.05□□□□□ -0.96
NBR1-201ENST00000341165 CDR1P51861 262 aa9.04□□□□□ -0.96
NBR1-201ENST00000341165 SPAG1Q07617 926 aa9.04□□□□□ -0.96
NBR1-201ENST00000341165 ENOX1Q8TC92 643 aaKnown RBP9.04□□□□□ -0.96
NBR1-201ENST00000341165 GUCY1A2P33402 732 aa9.04□□□□□ -0.96
NBR1-201ENST00000341165 NR5A1Q13285 461 aa9.04□□□□□ -0.96
NBR1-201ENST00000341165 SOGA3Q5TF21 947 aa9.04□□□□□ -0.96
NBR1-201ENST00000341165 NBPF11Q86T75 865 aa9.04□□□□□ -0.96
NBR1-201ENST00000341165 FAM177A1Q8N128 213 aaPredicted RBP9.04□□□□□ -0.96
NBR1-201ENST00000341165 CMTR1Q8N1G2 835 aaKnown RBP9.04□□□□□ -0.96
NBR1-201ENST00000341165 SH3GLB2Q9NR46 395 aa9.04□□□□□ -0.96
NBR1-201ENST00000341165 PCDHB6Q9Y5E3 794 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms