RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 VAT1LQ9HCJ6 419 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 B4DLN1 442 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 APBA3O96018 575 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 LUZP1Q86V48 1076 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 ZDHHC9Q9Y397 364 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 SPDYE3A6NKU9 549 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 RRP9O43818 475 aaKnown RBP8.59□□□□□ -1.03
HIPK1-201ENST00000340480 PFKFB1P16118 471 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 BAG6P46379 1132 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 SPA17Q15506 151 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 ARHGEF10LQ9HCE6 1279 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 CAMTA1Q9Y6Y1 1673 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 PPEF1O14829 653 aaPredicted RBP8.59□□□□□ -1.03
HIPK1-201ENST00000340480 ORC4O43929 436 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 MTIF2P46199 727 aaKnown RBP8.59□□□□□ -1.03
HIPK1-201ENST00000340480 JAKMIP3Q5VZ66 844 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 OTUD7BQ6GQQ9 843 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 FBXL16Q8N461 479 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 SDR42E1Q8WUS8 393 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 CUEDC2Q9H467 287 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 KDM4FA0A1W2PPD8 638 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 POTEB2H3BUK9 544 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 LIG1P18858 919 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 BTDP43251 543 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 NOP2P46087 812 aaKnown RBP8.58□□□□□ -1.04
HIPK1-201ENST00000340480 ADCY7P51828 1080 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 GPATCH4Q5T3I0 446 aaKnown RBP8.58□□□□□ -1.04
HIPK1-201ENST00000340480 FMNL3Q8IVF7 1028 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 MAPKAPK5Q8IW41 473 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 TGFBRAP1Q8WUH2 860 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 MYL1P05976 194 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 SNW1Q13573 536 aaKnown RBP8.58□□□□□ -1.04
HIPK1-201ENST00000340480 NOM1Q5C9Z4 860 aaKnown RBP8.58□□□□□ -1.04
HIPK1-201ENST00000340480 CNGA4Q8IV77 575 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 BLIDQ8IZY5 108 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 UBXN4Q92575 508 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 MYL10Q9BUA6 226 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 RGPD1P0DJD0 1748 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 MRC1P22897 1456 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 USO1O60763 962 aaKnown RBP8.58□□□□□ -1.04
HIPK1-201ENST00000340480 ASPRV1Q53RT3 343 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 REXO1Q8N1G1 1221 aaKnown RBP8.58□□□□□ -1.04
HIPK1-201ENST00000340480 MMP1P03956 469 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 POSTNQ15063 836 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 HAUS3Q68CZ6 603 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 DHX36Q9H2U1 1008 aaKnown RBP8.58□□□□□ -1.04
HIPK1-201ENST00000340480 SH3GLB2Q9NR46 395 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 GOLGA6L10A6NI86 522 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 F8W031 263 aaPredicted RBP8.58□□□□□ -1.04
HIPK1-201ENST00000340480 RIMBP2O15034 1052 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 LTN1O94822 1766 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 IDEP14735 1019 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 MCM3P25205 808 aa8.58□□□□□ -1.04
HIPK1-201ENST00000340480 ORC2Q13416 577 aaPredicted RBP8.58□□□□□ -1.04
HIPK1-201ENST00000340480 SEPT11Q9NVA2 429 aaKnown RBP8.58□□□□□ -1.04
HIPK1-201ENST00000340480 IKBKBO14920 756 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 ZNF500O60304 480 aaPredicted RBP8.57□□□□□ -1.04
HIPK1-201ENST00000340480 TBCAO75347 108 aaKnown RBP8.57□□□□□ -1.04
HIPK1-201ENST00000340480 RFX1P22670 979 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 CA8P35219 290 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 LONP1P36776 959 aaKnown RBP8.57□□□□□ -1.04
HIPK1-201ENST00000340480 ASIC1P78348 528 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 SEMA3FQ13275 785 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 LRRC45Q96CN5 670 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 ZSWIM5Q9P217 1185 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.57□□□□□ -1.042e-7■■■□□ 14.6
HIPK1-201ENST00000340480 CDC25BP30305 580 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 MCM7P33993 719 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 AFMP43652 599 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 PIK3AP1Q6ZUJ8 805 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 GAS2L3Q86XJ1 694 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 VTI1AQ96AJ9 217 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 NUP88Q99567 741 aaPredicted RBP8.57□□□□□ -1.04
HIPK1-201ENST00000340480 ARID3AQ99856 593 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 TTF2Q9UNY4 1162 aaKnown RBP8.57□□□□□ -1.04
HIPK1-201ENST00000340480 VWA3AA6NCI4 1184 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 LMOD1P29536 600 aaPredicted RBP8.57□□□□□ -1.04
HIPK1-201ENST00000340480 CETN1Q12798 172 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 KRBA2Q6ZNG9 492 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 CRAMP1Q96RY5 1269 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
HIPK1-201ENST00000340480 GTF2IP78347 998 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 SRP68Q9UHB9 627 aaKnown RBP8.57□□□□□ -1.04
HIPK1-201ENST00000340480 CYLC1P35663 651 aaPredicted RBP8.57□□□□□ -1.04
HIPK1-201ENST00000340480 MECOMQ03112 1051 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 SBK1Q52WX2 424 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 CNNM4Q6P4Q7 775 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 KIAA1328Q86T90 577 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 AK8Q96MA6 479 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 FERMT1Q9BQL6 677 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 SSX2IPQ9Y2D8 614 aa8.57□□□□□ -1.04
HIPK1-201ENST00000340480 NR1I2O75469 434 aa8.56□□□□□ -1.04
HIPK1-201ENST00000340480 ERCC5P28715 1186 aaPredicted RBP8.56□□□□□ -1.04
HIPK1-201ENST00000340480 ZNF174Q15697 407 aa8.56□□□□□ -1.04
HIPK1-201ENST00000340480 CACNA2D4Q7Z3S7 1137 aa8.56□□□□□ -1.04
HIPK1-201ENST00000340480 TBC1D10CQ8IV04 446 aa8.56□□□□□ -1.04
HIPK1-201ENST00000340480 ZNF579Q8NAF0 562 aaKnown RBP8.56□□□□□ -1.04
HIPK1-201ENST00000340480 ARHGEF1Q92888 912 aaKnown RBP8.56□□□□□ -1.04
HIPK1-201ENST00000340480 CCDC40Q4G0X9 1142 aa8.56□□□□□ -1.04
HIPK1-201ENST00000340480 SV2BQ7L1I2 683 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms