RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 ZMYND8Q9ULU4 1186 aaPredicted RBP19.88■□□□□ 0.77
H3F3C-201ENST00000340398 USP17L15C9J2P7 530 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 USP17L13C9JLJ4 530 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 USP17L11C9JVI0 530 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 USP17L18D6R9N7 530 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 USP17L22D6RA61 530 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 USP17L17D6RBQ6 530 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 USP17L19D6RCP7 530 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 USP17L20D6RJB6 530 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 SOX1O00570 391 aaPredicted RBP19.87■□□□□ 0.77
H3F3C-201ENST00000340398 CCND3P30281 292 aaPredicted RBP19.87■□□□□ 0.77
H3F3C-201ENST00000340398 SHMT1P34896 483 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 USP17L24Q0WX57 530 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 PDE3AQ14432 1141 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 CATSPERGQ6ZRH7 1159 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 SOCS4Q8WXH5 440 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 C12orf42Q96LP6 360 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 EHD4Q9H223 541 aa19.87■□□□□ 0.77
H3F3C-201ENST00000340398 MAGEB6P1A0A0J9YX57 407 aa19.86■□□□□ 0.77
H3F3C-201ENST00000340398 POLR3DP05423 398 aaPredicted RBP19.86■□□□□ 0.77
H3F3C-201ENST00000340398 GUCY1A2P33402 732 aa19.86■□□□□ 0.77
H3F3C-201ENST00000340398 SLC9C2Q5TAH2 1124 aa19.86■□□□□ 0.77
H3F3C-201ENST00000340398 CERS3Q8IU89 383 aa19.86■□□□□ 0.77
H3F3C-201ENST00000340398 EDC3Q96F86 508 aaKnown RBP19.86■□□□□ 0.77
H3F3C-201ENST00000340398 C11orf49Q9H6J7 331 aa19.86■□□□□ 0.77
H3F3C-201ENST00000340398 PDE6AP16499 860 aa19.85■□□□□ 0.77
H3F3C-201ENST00000340398 ZKSCAN1P17029 563 aaPredicted RBP19.85■□□□□ 0.77
H3F3C-201ENST00000340398 SYN1P17600 705 aa19.85■□□□□ 0.77
H3F3C-201ENST00000340398 RGS2P41220 211 aa19.85■□□□□ 0.77
H3F3C-201ENST00000340398 SLFNL1Q499Z3 407 aa19.85■□□□□ 0.77
H3F3C-201ENST00000340398 SIRT2Q8IXJ6 389 aa19.85■□□□□ 0.77
H3F3C-201ENST00000340398 LRCH3Q96II8 777 aa19.85■□□□□ 0.77
H3F3C-201ENST00000340398 KIAA1683Q9H0B3 1180 aa19.85■□□□□ 0.77
H3F3C-201ENST00000340398 CABP5Q9NP86 173 aa19.85■□□□□ 0.77
H3F3C-201ENST00000340398 BTBD7Q9P203 1132 aa19.85■□□□□ 0.77
H3F3C-201ENST00000340398 RABGAP1Q9Y3P9 1069 aa19.85■□□□□ 0.77
H3F3C-201ENST00000340398 DDX60LQ5H9U9 1706 aaKnown RBP19.85■□□□□ 0.77
H3F3C-201ENST00000340398 GOLIM4O00461 696 aa19.84■□□□□ 0.77
H3F3C-201ENST00000340398 VCAM1P19320 739 aa19.84■□□□□ 0.77
H3F3C-201ENST00000340398 GABPAQ06546 454 aa19.84■□□□□ 0.77
H3F3C-201ENST00000340398 SEPT2Q15019 361 aa19.84■□□□□ 0.77
H3F3C-201ENST00000340398 WDR78Q5VTH9 848 aa19.84■□□□□ 0.77
H3F3C-201ENST00000340398 LHX8Q68G74 356 aa19.84■□□□□ 0.77
H3F3C-201ENST00000340398 GTF3C2Q8WUA4 911 aaPredicted RBP19.84■□□□□ 0.77
H3F3C-201ENST00000340398 SDR42E1Q8WUS8 393 aa19.84■□□□□ 0.77
H3F3C-201ENST00000340398 CWC22Q9HCG8 908 aaKnown RBP19.84■□□□□ 0.77
H3F3C-201ENST00000340398 FLRT1Q9NZU1 646 aa19.84■□□□□ 0.77
H3F3C-201ENST00000340398 PFASO15067 1338 aa19.83■□□□□ 0.77
H3F3C-201ENST00000340398 ZNF532Q9HCE3 1301 aa19.83■□□□□ 0.77
H3F3C-201ENST00000340398 CYP2D6P10635 497 aa19.83■□□□□ 0.77
H3F3C-201ENST00000340398 USP14P54578 494 aa19.83■□□□□ 0.77
H3F3C-201ENST00000340398 MAP2K5Q13163 448 aa19.83■□□□□ 0.77
H3F3C-201ENST00000340398 HSP90AB4PQ58FF6 505 aa19.83■□□□□ 0.77
H3F3C-201ENST00000340398 TRMT44Q8IYL2 757 aaKnown RBP19.83■□□□□ 0.77
H3F3C-201ENST00000340398 DNAJC2Q99543 621 aaKnown RBP19.83■□□□□ 0.77
H3F3C-201ENST00000340398 GDF15Q99988 308 aa19.83■□□□□ 0.77
H3F3C-201ENST00000340398 RPAP3Q9H6T3 665 aaPredicted RBP19.83■□□□□ 0.77
H3F3C-201ENST00000340398 MCM9Q9NXL9 1143 aa19.83■□□□□ 0.77
H3F3C-201ENST00000340398 A0A1W2PRG0 241 aa19.82■□□□□ 0.76
H3F3C-201ENST00000340398 TCRBV5S4A2TA0A5A2 114 aa19.82■□□□□ 0.76
H3F3C-201ENST00000340398 MPHOSPH10O00566 681 aaKnown RBP19.82■□□□□ 0.76
H3F3C-201ENST00000340398 TTF1Q15361 905 aaPredicted RBP19.82■□□□□ 0.76
H3F3C-201ENST00000340398 DIEXFQ68CQ4 756 aaKnown RBP19.82■□□□□ 0.76
H3F3C-201ENST00000340398 CLASRPQ8N2M8 674 aaKnown RBP19.82■□□□□ 0.76
H3F3C-201ENST00000340398 LCORLQ8N3X6 602 aa19.82■□□□□ 0.76
H3F3C-201ENST00000340398 CRNKL1Q9BZJ0 848 aaKnown RBP19.82■□□□□ 0.76
H3F3C-201ENST00000340398 COG6Q9Y2V7 657 aa19.82■□□□□ 0.76
H3F3C-201ENST00000340398 IFIT2P09913 472 aaKnown RBP19.81■□□□□ 0.76
H3F3C-201ENST00000340398 PTPREP23469 700 aa19.81■□□□□ 0.76
H3F3C-201ENST00000340398 SLC44A5Q8NCS7 719 aa19.81■□□□□ 0.76
H3F3C-201ENST00000340398 KIF1BPQ96EK5 621 aa19.81■□□□□ 0.76
H3F3C-201ENST00000340398 APBA2Q99767 749 aa19.81■□□□□ 0.76
H3F3C-201ENST00000340398 DCP1AQ9NPI6 582 aaPredicted RBP19.81■□□□□ 0.76
H3F3C-201ENST00000340398 A0A1W2PPC1 479 aa19.8■□□□□ 0.76
H3F3C-201ENST00000340398 SPDYE16A6NNV3 312 aaPredicted RBP19.8■□□□□ 0.76
H3F3C-201ENST00000340398 SMIM22K7EJ46 135 aa19.8■□□□□ 0.76
H3F3C-201ENST00000340398 PRKAB2O43741 272 aa19.8■□□□□ 0.76
H3F3C-201ENST00000340398 CHGBP05060 677 aa19.8■□□□□ 0.76
H3F3C-201ENST00000340398 BMP8BP34820 402 aa19.8■□□□□ 0.76
H3F3C-201ENST00000340398 CCNA1P78396 465 aa19.8■□□□□ 0.76
H3F3C-201ENST00000340398 KIAA1755Q5JYT7 1200 aa19.8■□□□□ 0.76
H3F3C-201ENST00000340398 TMED8Q6PL24 325 aaPredicted RBP19.8■□□□□ 0.76
H3F3C-201ENST00000340398 RPAP2Q8IXW5 612 aaPredicted RBP19.8■□□□□ 0.76
H3F3C-201ENST00000340398 NPLOC4Q8TAT6 608 aa19.8■□□□□ 0.76
H3F3C-201ENST00000340398 DYNLL2Q96FJ2 89 aa19.8■□□□□ 0.76
H3F3C-201ENST00000340398 BOLA2Q9H3K6 86 aa19.8■□□□□ 0.76
H3F3C-201ENST00000340398 ARMT1Q9H993 441 aa19.8■□□□□ 0.76
H3F3C-201ENST00000340398 ZBED9Q6R2W3 1325 aa19.79■□□□□ 0.76
H3F3C-201ENST00000340398 SLC15A5A6NIM6 579 aa19.79■□□□□ 0.76
H3F3C-201ENST00000340398 GLRX3O76003 335 aaKnown RBP19.79■□□□□ 0.76
H3F3C-201ENST00000340398 COL6A1P12109 1028 aa19.79■□□□□ 0.76
H3F3C-201ENST00000340398 MAGEA10P43363 369 aaPredicted RBP19.79■□□□□ 0.76
H3F3C-201ENST00000340398 LBX2Q6XYB7 198 aa19.79■□□□□ 0.76
H3F3C-201ENST00000340398 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.79■□□□□ 0.76
H3F3C-201ENST00000340398 ZBTB40Q9NUA8 1239 aa19.79■□□□□ 0.76
H3F3C-201ENST00000340398 CYP2C19P33261 490 aa19.78■□□□□ 0.76
H3F3C-201ENST00000340398 LRRC26Q2I0M4 334 aa19.78■□□□□ 0.76
H3F3C-201ENST00000340398 MFSD14CQ5VZR4 134 aa19.78■□□□□ 0.76
H3F3C-201ENST00000340398 SIAH1Q8IUQ4 282 aa19.78■□□□□ 0.76
H3F3C-201ENST00000340398 NAV1Q8NEY1 1877 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms