RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 RASGRF1Q13972 1273 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 CIAPIN1Q6FI81 312 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 ANKRD35Q8N283 1001 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 GLG1Q92896 1179 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 DIP2CQ9Y2E4 1556 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 CEP152O94986 1710 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 MED23Q9ULK4 1368 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 PRKAB2O43741 272 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 IFFO1Q0D2I5 559 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 STRN3Q13033 797 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 GNPTABQ3T906 1256 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 EPHA10Q5JZY3 1008 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 LUC7L2Q9Y383 392 aaKnown RBP16.84■□□□□ 0.29
C9orf47-201ENST00000334490 USP17L3A6NCW0 530 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 USP17L4A6NCW7 530 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 RAPGEF1Q13905 1077 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 SLC27A3Q5K4L6 730 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 MYSM1Q5VVJ2 828 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 USP17L1Q7RTZ2 530 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 COA1Q9GZY4 146 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 PFKFB2O60825 505 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 ZNF202O95125 648 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 SCG2P13521 617 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 MCM3P25205 808 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 SUPT20HL1Q3ZLR7 823 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 TBC1D9BQ66K14 1250 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 CABP7Q86V35 215 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 SLC5A4Q9NY91 659 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 CYP21A2P08686 494 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 ZNF589Q86UQ0 364 aaPredicted RBP16.84■□□□□ 0.29
C9orf47-201ENST00000334490 GPKOWQ92917 476 aaPredicted RBP eCLIP16.84■□□□□ 0.29
C9orf47-201ENST00000334490 LSG1Q9H089 658 aaKnown RBP16.84■□□□□ 0.29
C9orf47-201ENST00000334490 CTNND2Q9UQB3 1225 aa16.84■□□□□ 0.29
C9orf47-201ENST00000334490 ARHGEF16Q5VV41 709 aa16.83■□□□□ 0.29
C9orf47-201ENST00000334490 LCORLQ8N3X6 602 aa16.83■□□□□ 0.29
C9orf47-201ENST00000334490 STAMQ92783 540 aa16.83■□□□□ 0.29
C9orf47-201ENST00000334490 CWC15Q9P013 229 aaKnown RBP16.83■□□□□ 0.29
C9orf47-201ENST00000334490 CEP83Q9Y592 693 aa16.83■□□□□ 0.29
C9orf47-201ENST00000334490 TRPM1Q7Z4N2 1603 aa16.83■□□□□ 0.28
C9orf47-201ENST00000334490 ZMYM6O95789 1325 aa16.83■□□□□ 0.28
C9orf47-201ENST00000334490 GCOM1H8Y6P7 765 aaPredicted RBP16.83■□□□□ 0.28
C9orf47-201ENST00000334490 CETN3O15182 167 aa16.83■□□□□ 0.28
C9orf47-201ENST00000334490 POLR2MP0CAP2 368 aa16.83■□□□□ 0.28
C9orf47-201ENST00000334490 ZNF526Q8TF50 670 aaPredicted RBP16.83■□□□□ 0.28
C9orf47-201ENST00000334490 SWAP70Q9UH65 585 aa16.83■□□□□ 0.28
C9orf47-201ENST00000334490 LMTK2Q8IWU2 1503 aa16.83■□□□□ 0.28
C9orf47-201ENST00000334490 DDAH1O94760 285 aa16.83■□□□□ 0.28
C9orf47-201ENST00000334490 TBC1D8BQ0IIM8 1120 aa16.83■□□□□ 0.28
C9orf47-201ENST00000334490 TPH2Q8IWU9 490 aa16.83■□□□□ 0.28
C9orf47-201ENST00000334490 RASEFQ8IZ41 740 aa16.83■□□□□ 0.28
C9orf47-201ENST00000334490 PCDHA1Q9Y5I3 950 aa16.83■□□□□ 0.28
C9orf47-201ENST00000334490 M0R2C6 588 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 SNAP23O00161 211 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 EN1Q05925 392 aaPredicted RBP16.82■□□□□ 0.28
C9orf47-201ENST00000334490 SIRT2Q8IXJ6 389 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 OSBP2Q969R2 916 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 NOC4LQ9BVI4 516 aaKnown RBP16.82■□□□□ 0.28
C9orf47-201ENST00000334490 KIF5AQ12840 1032 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 INF2Q27J81 1249 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 PUS7LQ9H0K6 701 aaKnown RBP16.82■□□□□ 0.28
C9orf47-201ENST00000334490 EXOC7Q9UPT5 735 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 CLTCQ00610 1675 aaKnown RBP16.82■□□□□ 0.28
C9orf47-201ENST00000334490 ADCY9O60503 1353 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 GDF11O95390 407 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 DNM2P50570 870 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 POLA2Q14181 598 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 KIAA0753Q2KHM9 967 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 PRR16Q569H4 304 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 NCAPG2Q86XI2 1143 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 NOSTRINQ8IVI9 506 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 MYCT1Q8N699 235 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 CSGALNACT2Q8N6G5 542 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 GJC1P36383 396 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 MLXIPQ9HAP2 919 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 TBC1D7Q9P0N9 293 aa16.82■□□□□ 0.28
C9orf47-201ENST00000334490 KIF4AO95239 1232 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 KRT83P78385 493 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 VPS72Q15906 364 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 ADCK5Q3MIX3 580 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 WDR44Q5JSH3 913 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 TRIM6Q9C030 488 aaPredicted RBP16.81■□□□□ 0.28
C9orf47-201ENST00000334490 TACC1O75410 805 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 EZRP15311 586 aaKnown RBP16.81■□□□□ 0.28
C9orf47-201ENST00000334490 PDIA3P30101 505 aaKnown RBP16.81■□□□□ 0.28
C9orf47-201ENST00000334490 CCPG1Q9ULG6 757 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 PTCH1Q13635 1447 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 SPATA31A6Q5VVP1 1343 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 EEF2P13639 858 aaKnown RBP16.81■□□□□ 0.28
C9orf47-201ENST00000334490 MECOMQ03112 1051 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 PDCL2Q8N4E4 241 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 VPS16Q9H269 839 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 SPC25Q9HBM1 224 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 TAF12Q16514 161 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 GPATCH4Q5T3I0 446 aaKnown RBP16.81■□□□□ 0.28
C9orf47-201ENST00000334490 MIER3Q7Z3K6 550 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 ZNF354CQ86Y25 554 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 DHX36Q9H2U1 1008 aaKnown RBP16.81■□□□□ 0.28
C9orf47-201ENST00000334490 KANSL2Q9H9L4 492 aa16.81■□□□□ 0.28
C9orf47-201ENST00000334490 BTBD18B2RXH4 712 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 CCDC175P0C221 793 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms