RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 CPLX2Q6PUV4 134 aaKnown RBP10.16□□□□□ -0.78
LSAMP-201ENST00000333617 APOA5Q6Q788 366 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 SGMS1Q86VZ5 419 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 SDR42E1Q8WUS8 393 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 NSUN4Q96CB9 384 aaKnown RBP10.16□□□□□ -0.78
LSAMP-201ENST00000333617 THAP11Q96EK4 314 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 RIOK1Q9BRS2 568 aaKnown RBP10.16□□□□□ -0.78
LSAMP-201ENST00000333617 LY9Q9HBG7 655 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 ORC3Q9UBD5 711 aaPredicted RBP10.16□□□□□ -0.78
LSAMP-201ENST00000333617 IRS2Q9Y4H2 1338 aa10.16□□□□□ -0.78
LSAMP-201ENST00000333617 LTBP1Q14766 1721 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 MINDY4BA8MYZ0 360 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 PPFIA3O75145 1194 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 DYNLL1P63167 89 aaKnown RBP10.15□□□□□ -0.78
LSAMP-201ENST00000333617 GUCY1B3Q02153 619 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 MECOMQ03112 1051 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 CCDC173Q0VFZ6 552 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 CHAF1AQ13111 956 aaPredicted RBP10.15□□□□□ -0.78
LSAMP-201ENST00000333617 CRY2Q49AN0 593 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 SPTY2D1Q68D10 685 aaPredicted RBP10.15□□□□□ -0.78
LSAMP-201ENST00000333617 ATL3Q6DD88 541 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 ZNF384Q8TF68 577 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 EMID1Q96A84 441 aaPredicted RBP10.15□□□□□ -0.78
LSAMP-201ENST00000333617 RBM17Q96I25 401 aaKnown RBP10.15□□□□□ -0.78
LSAMP-201ENST00000333617 C8orf76Q96K31 380 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 ZNF396Q96N95 335 aaPredicted RBP10.15□□□□□ -0.78
LSAMP-201ENST00000333617 MTA3Q9BTC8 594 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 BRIP1Q9BX63 1249 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 TOMM22Q9NS69 142 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 ANAPC4Q9UJX5 808 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 TACC3Q9Y6A5 838 aa10.15□□□□□ -0.78
LSAMP-201ENST00000333617 RGPD3A6NKT7 1758 aaPredicted RBP10.15□□□□□ -0.79
LSAMP-201ENST00000333617 RGPD4Q7Z3J3 1758 aa10.15□□□□□ -0.79
LSAMP-201ENST00000333617 ERICH2A1L162 156 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 CCDC69A6NI79 296 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 ADD1P35611 737 aaKnown RBP10.14□□□□□ -0.79
LSAMP-201ENST00000333617 WTAPQ15007 396 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 SPRYD7Q5W111 196 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 GIMAP6Q6P9H5 292 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 SYNE3Q6ZMZ3 975 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 TXNRD3Q86VQ6 643 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 MICU3Q86XE3 530 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 RGS22Q8NE09 1264 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 SENP2Q9HC62 589 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 STK17AQ9UEE5 414 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 SLC12A7Q9Y666 1083 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 TNS1Q9HBL0 1735 aaKnown RBP10.14□□□□□ -0.79
LSAMP-201ENST00000333617 GOLGA8AA7E2F4 631 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 IGSF3O75054 1194 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 RXRAP19793 462 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 CLCN1P35523 988 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 RBM6P78332 1123 aaKnown RBP10.14□□□□□ -0.79
LSAMP-201ENST00000333617 SUZ12Q15022 739 aaKnown RBP10.14□□□□□ -0.79
LSAMP-201ENST00000333617 TXNRD1Q16881 649 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 ZNF772Q68DY9 489 aaPredicted RBP10.14□□□□□ -0.79
LSAMP-201ENST00000333617 LIAT1Q6ZQX7 453 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 ZNF804AQ7Z570 1209 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 STK11IPQ8N1F8 1099 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 TMTC2Q8N394 836 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 FBXO18Q8NFZ0 1043 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 WDR66Q8TBY9 1149 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 ESR2Q92731 530 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 PPP1R9BQ96SB3 815 aa10.14□□□□□ -0.79
LSAMP-201ENST00000333617 CRNKL1Q9BZJ0 848 aaKnown RBP10.14□□□□□ -0.79
LSAMP-201ENST00000333617 NID2Q14112 1375 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 COL11A2P13942 1736 aaPredicted RBP10.13□□□□□ -0.79
LSAMP-201ENST00000333617 PCP11498 1178 aaKnown RBP10.13□□□□□ -0.79
LSAMP-201ENST00000333617 LIG1P18858 919 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 PRDX5P30044 214 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 CDC27P30260 824 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 GPSM2P81274 684 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 CEBPZQ03701 1054 aaKnown RBP10.13□□□□□ -0.79
LSAMP-201ENST00000333617 DDR1Q08345 913 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 BRICD5Q6PL45 260 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 C15orf52Q6ZUT6 534 aaKnown RBP10.13□□□□□ -0.79
LSAMP-201ENST00000333617 ILDR2Q71H61 639 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 ZNF598Q86UK7 904 aaKnown RBP10.13□□□□□ -0.79
LSAMP-201ENST00000333617 DZIP1Q86YF9 867 aaKnown RBP10.13□□□□□ -0.79
LSAMP-201ENST00000333617 CCDC144CPQ8IYA2 1237 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 TRIM44Q96DX7 344 aaPredicted RBP10.13□□□□□ -0.79
LSAMP-201ENST00000333617 PGBD1Q96JS3 809 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 UBAC1Q9BSL1 405 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 GPCPD1Q9NPB8 672 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 AATFQ9NY61 560 aaKnown RBP eCLIP10.13□□□□□ -0.79
LSAMP-201ENST00000333617 RCOR1Q9UKL0 485 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 JAG2Q9Y219 1238 aa10.13□□□□□ -0.79
LSAMP-201ENST00000333617 POLRMTO00411 1230 aaKnown RBP10.12□□□□□ -0.79
LSAMP-201ENST00000333617 BBOX1O75936 387 aa10.12□□□□□ -0.79
LSAMP-201ENST00000333617 LDHBP07195 334 aaKnown RBP10.12□□□□□ -0.79
LSAMP-201ENST00000333617 ATP2B4P23634 1241 aa10.12□□□□□ -0.79
LSAMP-201ENST00000333617 IARSP41252 1262 aaKnown RBP10.12□□□□□ -0.79
LSAMP-201ENST00000333617 Q3C1V9 767 aa10.12□□□□□ -0.79
LSAMP-201ENST00000333617 OTUD7BQ6GQQ9 843 aa10.12□□□□□ -0.79
LSAMP-201ENST00000333617 BRAPQ7Z569 592 aa10.12□□□□□ -0.79
LSAMP-201ENST00000333617 FAM43AQ8N2R8 423 aa10.12□□□□□ -0.79
LSAMP-201ENST00000333617 KRI1Q8N9T8 703 aaKnown RBP10.12□□□□□ -0.79
LSAMP-201ENST00000333617 RNF214Q8ND24 703 aa10.12□□□□□ -0.79
LSAMP-201ENST00000333617 TDRD7Q8NHU6 1098 aaKnown RBP10.12□□□□□ -0.79
LSAMP-201ENST00000333617 BICD2Q8TD16 824 aa10.12□□□□□ -0.79
LSAMP-201ENST00000333617 USP28Q96RU2 1077 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms