RNA–Protein interactions for RNA: ENST00000331968.9

PRKD1-201, Transcript of protein kinase D1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD1, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-201ENST00000331968 NUP88Q99567 741 aaPredicted RBP15.3■□□□□ 0.04
PRKD1-201ENST00000331968 RSPH14Q9UHP6 348 aa15.3■□□□□ 0.04
PRKD1-201ENST00000331968 NARFQ9UHQ1 456 aa15.3■□□□□ 0.04
PRKD1-201ENST00000331968 SPATA31A5Q5VU36 1347 aa15.3■□□□□ 0.04
PRKD1-201ENST00000331968 SPATA31A7Q8IWB4 1347 aa15.3■□□□□ 0.04
PRKD1-201ENST00000331968 CTDNEP1O95476 244 aa15.3■□□□□ 0.04
PRKD1-201ENST00000331968 ADGRA1Q86SQ6 560 aa15.3■□□□□ 0.04
PRKD1-201ENST00000331968 RBM17Q96I25 401 aaKnown RBP15.3■□□□□ 0.04
PRKD1-201ENST00000331968 EPB41L4AQ9HCS5 686 aaPredicted RBP15.3■□□□□ 0.04
PRKD1-201ENST00000331968 PFKFB1P16118 471 aa15.3■□□□□ 0.04
PRKD1-201ENST00000331968 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
PRKD1-201ENST00000331968 ANKRD20A12PQ8NF67 263 aa15.3■□□□□ 0.04
PRKD1-201ENST00000331968 SH3RF3Q8TEJ3 882 aaPredicted RBP15.3■□□□□ 0.04
PRKD1-201ENST00000331968 SMARCE1Q969G3 411 aa15.3■□□□□ 0.04
PRKD1-201ENST00000331968 TANGO6Q9C0B7 1094 aa15.3■□□□□ 0.04
PRKD1-201ENST00000331968 PLEKHA4Q9H4M7 779 aa15.3■□□□□ 0.04
PRKD1-201ENST00000331968 KIF28PB7ZC32 967 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 KIF5BP33176 963 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 ZNF569Q5MCW4 686 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 SMYD4Q8IYR2 804 aaPredicted RBP15.29■□□□□ 0.04
PRKD1-201ENST00000331968 PPP1R13BQ96KQ4 1090 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 ZSCAN10Q96SZ4 725 aaPredicted RBP15.29■□□□□ 0.04
PRKD1-201ENST00000331968 KCNH3Q9ULD8 1083 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.29■□□□□ 0.04
PRKD1-201ENST00000331968 RGPD2P0DJD1 1756 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 CCP110O43303 1012 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 KIF5CO60282 957 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 ZNF76P36508 570 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.29■□□□□ 0.04
PRKD1-201ENST00000331968 TMTC2Q8N394 836 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 LLPHQ9BRT6 129 aaKnown RBP15.29■□□□□ 0.04
PRKD1-201ENST00000331968 PKD2L1Q9P0L9 805 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 SLC16A2P36021 539 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 SNAP25P60880 206 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 USP17L2Q6R6M4 530 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 USP40Q9NVE5 1235 aa15.29■□□□□ 0.04
PRKD1-201ENST00000331968 USP42Q9H9J4 1324 aaKnown RBP15.29■□□□□ 0.04
PRKD1-201ENST00000331968 CAVIN2O95810 425 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 CAPN2P17655 700 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 OAS2P29728 719 aaKnown RBP15.28■□□□□ 0.04
PRKD1-201ENST00000331968 SPICE1Q8N0Z3 855 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 LRRN4CLQ8ND94 238 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 BSDC1Q9NW68 430 aaPredicted RBP15.28■□□□□ 0.04
PRKD1-201ENST00000331968 NFAT5O94916 1531 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 NALCNQ8IZF0 1738 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 CLRN2A0PK11 232 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 SH2B2O14492 632 aaPredicted RBP15.28■□□□□ 0.04
PRKD1-201ENST00000331968 CLCN6P51797 869 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 PNMA1Q8ND90 353 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 BAG1Q99933 345 aaPredicted RBP15.28■□□□□ 0.04
PRKD1-201ENST00000331968 SERTAD1Q9UHV2 236 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 NFE2L3Q9Y4A8 694 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 MED23Q9ULK4 1368 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 MYL5Q02045 173 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 PPP2R3AQ06190 1150 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 MB21D2Q8IYB1 491 aaPredicted RBP15.28■□□□□ 0.04
PRKD1-201ENST00000331968 PCDHB6Q9Y5E3 794 aa15.28■□□□□ 0.04
PRKD1-201ENST00000331968 TMEM232C9JQI7 657 aa15.27■□□□□ 0.04
PRKD1-201ENST00000331968 KRT2P35908 639 aa15.27■□□□□ 0.04
PRKD1-201ENST00000331968 TCEAL9Q9UHQ7 104 aa15.27■□□□□ 0.04
PRKD1-201ENST00000331968 LTN1O94822 1766 aa15.27■□□□□ 0.04
PRKD1-201ENST00000331968 CCDC178Q5BJE1 867 aa15.27■□□□□ 0.03
PRKD1-201ENST00000331968 KRI1Q8N9T8 703 aaKnown RBP15.27■□□□□ 0.03
PRKD1-201ENST00000331968 WDR66Q8TBY9 1149 aa15.27■□□□□ 0.03
PRKD1-201ENST00000331968 CWC15Q9P013 229 aaKnown RBP15.27■□□□□ 0.03
PRKD1-201ENST00000331968 DEXIO95424 95 aa15.27■□□□□ 0.03
PRKD1-201ENST00000331968 FDPSP14324 419 aaKnown RBP15.27■□□□□ 0.03
PRKD1-201ENST00000331968 CHRNA5P30532 468 aa15.27■□□□□ 0.03
PRKD1-201ENST00000331968 USH1GQ495M9 461 aa15.27■□□□□ 0.03
PRKD1-201ENST00000331968 RRAGBQ5VZM2 374 aa15.27■□□□□ 0.03
PRKD1-201ENST00000331968 WWC2Q6AWC2 1192 aa15.27■□□□□ 0.03
PRKD1-201ENST00000331968 EYA3Q99504 573 aa15.27■□□□□ 0.03
PRKD1-201ENST00000331968 BIN2Q9UBW5 565 aaPredicted RBP15.27■□□□□ 0.03
PRKD1-201ENST00000331968 AKAP12Q02952 1782 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 N4BP3O15049 544 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 PDIA4P13667 645 aaKnown RBP15.26■□□□□ 0.03
PRKD1-201ENST00000331968 FCHSD1Q86WN1 690 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 DDX41Q9UJV9 622 aaKnown RBP15.26■□□□□ 0.03
PRKD1-201ENST00000331968 RAD17O75943 681 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 EXOSC10Q01780 885 aaKnown RBP15.26■□□□□ 0.03
PRKD1-201ENST00000331968 KIF23Q02241 960 aaPredicted RBP15.26■□□□□ 0.03
PRKD1-201ENST00000331968 RASGRP2Q7LDG7 609 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 PLA2G4DQ86XP0 818 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 GUCA1BQ9UMX6 200 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 CEP131Q9UPN4 1083 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 THRAP3Q9Y2W1 955 aaKnown RBP15.26■□□□□ 0.03
PRKD1-201ENST00000331968 FOXN1O15353 648 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 TXKP42681 527 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 TXNRD1Q16881 649 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 INF2Q27J81 1249 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 MRFAP1L1Q96HT8 127 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 FUCA2Q9BTY2 467 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 IRX2Q9BZI1 471 aaPredicted RBP15.26■□□□□ 0.03
PRKD1-201ENST00000331968 VPS16Q9H269 839 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 TMOD2Q9NZR1 351 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 FBXO3Q9UK99 471 aa15.26■□□□□ 0.03
PRKD1-201ENST00000331968 H0YHG0 523 aa15.25■□□□□ 0.03
PRKD1-201ENST00000331968 ETF1P62495 437 aaKnown RBP15.25■□□□□ 0.03
PRKD1-201ENST00000331968 TERF2Q15554 542 aa15.25■□□□□ 0.03
PRKD1-201ENST00000331968 NKX2-3Q8TAU0 364 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms