RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 C4BP0C0L5 1744 aa27.41■■□□□ 1.98
SOX1-201ENST00000330949 NDUFAB1O14561 156 aa27.4■■□□□ 1.98
SOX1-201ENST00000330949 RNF113AO15541 343 aaKnown RBP27.4■■□□□ 1.98
SOX1-201ENST00000330949 MEFVO15553 781 aaPredicted RBP27.4■■□□□ 1.98
SOX1-201ENST00000330949 OPA1O60313 960 aa27.4■■□□□ 1.98
SOX1-201ENST00000330949 TRIM29Q14134 588 aa27.4■■□□□ 1.98
SOX1-201ENST00000330949 CDKAL1Q5VV42 579 aa27.4■■□□□ 1.98
SOX1-201ENST00000330949 SPATA20Q8TB22 786 aa27.4■■□□□ 1.98
SOX1-201ENST00000330949 SLF1Q9BQI6 1058 aa27.4■■□□□ 1.98
SOX1-201ENST00000330949 GUCA1BQ9UMX6 200 aa27.4■■□□□ 1.98
SOX1-201ENST00000330949 SAMM50Q9Y512 469 aa27.4■■□□□ 1.98
SOX1-201ENST00000330949 SPECC1Q5M775 1068 aa27.4■■□□□ 1.98
SOX1-201ENST00000330949 CPLX2Q6PUV4 134 aaKnown RBP27.4■■□□□ 1.98
SOX1-201ENST00000330949 RALYLQ86SE5 291 aaKnown RBP27.4■■□□□ 1.98
SOX1-201ENST00000330949 NCOA7Q8NI08 942 aa27.4■■□□□ 1.98
SOX1-201ENST00000330949 MYO1FO00160 1098 aa27.39■■□□□ 1.98
SOX1-201ENST00000330949 CCDC70Q6NSX1 233 aa27.39■■□□□ 1.98
SOX1-201ENST00000330949 MICALCLQ6ZW33 695 aa27.39■■□□□ 1.98
SOX1-201ENST00000330949 WDR19Q8NEZ3 1342 aa27.39■■□□□ 1.98
SOX1-201ENST00000330949 METTL22Q9BUU2 404 aaPredicted RBP27.39■■□□□ 1.98
SOX1-201ENST00000330949 RABEP2Q9H5N1 569 aa27.39■■□□□ 1.98
SOX1-201ENST00000330949 HAUS4Q9H6D7 363 aa27.39■■□□□ 1.98
SOX1-201ENST00000330949 ELF1P32519 619 aa27.39■■□□□ 1.97
SOX1-201ENST00000330949 TRIM14Q14142 442 aa27.39■■□□□ 1.97
SOX1-201ENST00000330949 PAPD7Q5XG87 772 aaKnown RBP27.39■■□□□ 1.97
SOX1-201ENST00000330949 ANKRD18AQ8IVF6 992 aa27.39■■□□□ 1.97
SOX1-201ENST00000330949 SKOR1P84550 965 aa27.38■■□□□ 1.97
SOX1-201ENST00000330949 RGPD5Q99666 1765 aa27.38■■□□□ 1.97
SOX1-201ENST00000330949 IQCEQ6IPM2 695 aa27.38■■□□□ 1.97
SOX1-201ENST00000330949 WDR17Q8IZU2 1322 aa27.37■■□□□ 1.97
SOX1-201ENST00000330949 ZMYND10O75800 440 aa27.37■■□□□ 1.97
SOX1-201ENST00000330949 MYBL2P10244 700 aa27.37■■□□□ 1.97
SOX1-201ENST00000330949 TATP17735 454 aaPredicted RBP27.37■■□□□ 1.97
SOX1-201ENST00000330949 HAND2P61296 217 aa27.37■■□□□ 1.97
SOX1-201ENST00000330949 YTHDF3Q7Z739 585 aaKnown RBP27.37■■□□□ 1.97
SOX1-201ENST00000330949 AENQ8WTP8 325 aaKnown RBP27.37■■□□□ 1.97
SOX1-201ENST00000330949 ZKSCAN4Q969J2 545 aaPredicted RBP27.37■■□□□ 1.97
SOX1-201ENST00000330949 ZNF330Q9Y3S2 320 aaPredicted RBP27.37■■□□□ 1.97
SOX1-201ENST00000330949 CCDC189A1A4V9 331 aa27.37■■□□□ 1.97
SOX1-201ENST00000330949 ENC1O14682 589 aa27.37■■□□□ 1.97
SOX1-201ENST00000330949 GSPT2Q8IYD1 628 aaKnown RBP27.37■■□□□ 1.97
SOX1-201ENST00000330949 NUP88Q99567 741 aaPredicted RBP27.37■■□□□ 1.97
SOX1-201ENST00000330949 HDAC6Q9UBN7 1215 aa27.37■■□□□ 1.97
SOX1-201ENST00000330949 MCM8Q9UJA3 840 aa27.37■■□□□ 1.97
SOX1-201ENST00000330949 DDX60Q8IY21 1712 aaKnown RBP27.37■■□□□ 1.97
SOX1-201ENST00000330949 ANTXR2P58335 489 aa27.36■■□□□ 1.97
SOX1-201ENST00000330949 TIMM10P62072 90 aa27.36■■□□□ 1.97
SOX1-201ENST00000330949 LMBR1LQ6UX01 489 aa27.36■■□□□ 1.97
SOX1-201ENST00000330949 PHKG2P15735 406 aa27.36■■□□□ 1.97
SOX1-201ENST00000330949 NF2P35240 595 aa27.36■■□□□ 1.97
SOX1-201ENST00000330949 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.36■■□□□ 1.97
SOX1-201ENST00000330949 STK11IPQ8N1F8 1099 aa27.36■■□□□ 1.97
SOX1-201ENST00000330949 PTPREP23469 700 aa27.36■■□□□ 1.97
SOX1-201ENST00000330949 KLHL10Q6JEL2 608 aa27.36■■□□□ 1.97
SOX1-201ENST00000330949 GRAMD1CQ8IYS0 662 aa27.36■■□□□ 1.97
SOX1-201ENST00000330949 EHBP1Q8NDI1 1231 aa27.36■■□□□ 1.97
SOX1-201ENST00000330949 EPN1Q9Y6I3 576 aaPredicted RBP27.36■■□□□ 1.97
SOX1-201ENST00000330949 ATP1A1P05023 1023 aaKnown RBP27.35■■□□□ 1.97
SOX1-201ENST00000330949 EPB41P11171 864 aaKnown RBP27.35■■□□□ 1.97
SOX1-201ENST00000330949 METAP2P50579 478 aaKnown RBP eCLIP27.35■■□□□ 1.97
SOX1-201ENST00000330949 PREPLQ4J6C6 727 aaPredicted RBP27.35■■□□□ 1.97
SOX1-201ENST00000330949 CEP120Q8N960 986 aa27.35■■□□□ 1.97
SOX1-201ENST00000330949 CPDO75976 1380 aa27.35■■□□□ 1.97
SOX1-201ENST00000330949 TMCO5BA8MYB1 307 aa27.35■■□□□ 1.97
SOX1-201ENST00000330949 M0R2C6 588 aa27.35■■□□□ 1.97
SOX1-201ENST00000330949 NDUFA10O95299 355 aa27.35■■□□□ 1.97
SOX1-201ENST00000330949 CAGE1Q8TC20 777 aa27.35■■□□□ 1.97
SOX1-201ENST00000330949 MIEF2Q96C03 454 aa27.35■■□□□ 1.97
SOX1-201ENST00000330949 FAM212AQ96EL1 285 aa27.35■■□□□ 1.97
SOX1-201ENST00000330949 CCDC85AQ96PX6 553 aaPredicted RBP27.35■■□□□ 1.97
SOX1-201ENST00000330949 VEZTQ9HBM0 779 aa27.35■■□□□ 1.97
SOX1-201ENST00000330949 CUL4BQ13620 913 aa27.34■■□□□ 1.97
SOX1-201ENST00000330949 ZNF579Q8NAF0 562 aaKnown RBP27.34■■□□□ 1.97
SOX1-201ENST00000330949 RUBCNQ92622 972 aa27.34■■□□□ 1.97
SOX1-201ENST00000330949 CAPZA3Q96KX2 299 aa27.34■■□□□ 1.97
SOX1-201ENST00000330949 ACTN4O43707 911 aaKnown RBP27.34■■□□□ 1.97
SOX1-201ENST00000330949 ZEB2O60315 1214 aa27.34■■□□□ 1.97
SOX1-201ENST00000330949 STX17P56962 302 aa27.34■■□□□ 1.97
SOX1-201ENST00000330949 FBXO2Q9UK22 296 aaPredicted RBP27.34■■□□□ 1.97
SOX1-201ENST00000330949 RABL6Q3YEC7 729 aaPredicted RBP27.33■■□□□ 1.97
SOX1-201ENST00000330949 JAKMIP2Q96AA8 810 aa27.33■■□□□ 1.97
SOX1-201ENST00000330949 ZNF594Q96JF6 807 aaPredicted RBP27.33■■□□□ 1.97
SOX1-201ENST00000330949 PAGR1Q9BTK6 254 aa27.33■■□□□ 1.97
SOX1-201ENST00000330949 RUFY1Q96T51 708 aa27.33■■□□□ 1.97
SOX1-201ENST00000330949 CD248Q9HCU0 757 aa27.33■■□□□ 1.97
SOX1-201ENST00000330949 NWD2Q9ULI1 1742 aa27.32■■□□□ 1.96
SOX1-201ENST00000330949 SRGAP2O75044 1071 aa27.32■■□□□ 1.96
SOX1-201ENST00000330949 SND1Q7KZF4 910 aaKnown RBP eCLIP27.32■■□□□ 1.96
SOX1-201ENST00000330949 SCP2P22307 547 aa27.32■■□□□ 1.96
SOX1-201ENST00000330949 KRT9P35527 623 aa27.32■■□□□ 1.96
SOX1-201ENST00000330949 PLCB4Q15147 1175 aa27.32■■□□□ 1.96
SOX1-201ENST00000330949 TRIM10Q9UDY6 481 aa27.32■■□□□ 1.96
SOX1-201ENST00000330949 N4BP3O15049 544 aa27.31■■□□□ 1.96
SOX1-201ENST00000330949 SMTNP53814 917 aa27.31■■□□□ 1.96
SOX1-201ENST00000330949 TTC19Q6DKK2 380 aaPredicted RBP27.31■■□□□ 1.96
SOX1-201ENST00000330949 NOSTRINQ8IVI9 506 aa27.31■■□□□ 1.96
SOX1-201ENST00000330949 KLC4Q9NSK0 619 aa27.31■■□□□ 1.96
SOX1-201ENST00000330949 PPP1R12AO14974 1030 aaPredicted RBP27.31■■□□□ 1.96
SOX1-201ENST00000330949 CYP27B1O15528 508 aa27.31■■□□□ 1.96
SOX1-201ENST00000330949 SNRPA1P09661 255 aaKnown RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms