RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 OLFM4Q6UX06 510 aa16.7■□□□□ 0.26
TPM3-206ENST00000330188 HOOK1Q9UJC3 728 aaKnown RBP16.7■□□□□ 0.26
TPM3-206ENST00000330188 TRIM75PA6NK02 468 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 SLC51AQ86UW1 340 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 CSRNP2Q9H175 543 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 USP21Q9UK80 565 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 MAN1B1Q9UKM7 699 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 ACTN4O43707 911 aaKnown RBP16.69■□□□□ 0.26
TPM3-206ENST00000330188 PRR29P0C7W0 189 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 PDE4BQ07343 736 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 NPY5RQ15761 445 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 NT5DC1Q5TFE4 455 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 SPTY2D1Q68D10 685 aaPredicted RBP16.69■□□□□ 0.26
TPM3-206ENST00000330188 ARMCX5Q6P1M9 558 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 DZIP1Q86YF9 867 aaKnown RBP16.69■□□□□ 0.26
TPM3-206ENST00000330188 ZNF710Q8N1W2 664 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 SRBD1Q8N5C6 995 aaKnown RBP16.69■□□□□ 0.26
TPM3-206ENST00000330188 CCDC150Q8NCX0 1101 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 TNFRSF25Q93038 417 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 KCND1Q9NSA2 647 aa16.69■□□□□ 0.26
TPM3-206ENST00000330188 SARSP49591 514 aaKnown RBP16.68■□□□□ 0.26
TPM3-206ENST00000330188 GRAPQ13588 217 aa16.68■□□□□ 0.26
TPM3-206ENST00000330188 USP49Q70CQ1 688 aa16.68■□□□□ 0.26
TPM3-206ENST00000330188 CTCFLQ8NI51 663 aaPredicted RBP16.68■□□□□ 0.26
TPM3-206ENST00000330188 GRAPLQ8TC17 118 aaPredicted RBP16.68■□□□□ 0.26
TPM3-206ENST00000330188 NPHP1O15259 732 aa16.67■□□□□ 0.26
TPM3-206ENST00000330188 RFC4P35249 363 aa16.67■□□□□ 0.26
TPM3-206ENST00000330188 MTERF4Q7Z6M4 381 aaKnown RBP16.67■□□□□ 0.26
TPM3-206ENST00000330188 DPF2Q92785 391 aa16.67■□□□□ 0.26
TPM3-206ENST00000330188 UBAP1LF5GYI3 381 aa16.67■□□□□ 0.26
TPM3-206ENST00000330188 WNT7AO00755 349 aa16.67■□□□□ 0.26
TPM3-206ENST00000330188 MYO1BO43795 1136 aa16.67■□□□□ 0.26
TPM3-206ENST00000330188 USP17L8P0C7I0 530 aa16.67■□□□□ 0.26
TPM3-206ENST00000330188 NYAP1Q6ZVC0 841 aa16.67■□□□□ 0.26
TPM3-206ENST00000330188 GRAMD1CQ8IYS0 662 aa16.67■□□□□ 0.26
TPM3-206ENST00000330188 CCAR2Q8N163 923 aaKnown RBP16.67■□□□□ 0.26
TPM3-206ENST00000330188 NOL10Q9BSC4 688 aaKnown RBP16.67■□□□□ 0.26
TPM3-206ENST00000330188 BRMS1Q9HCU9 246 aa16.67■□□□□ 0.26
TPM3-206ENST00000330188 MCM9Q9NXL9 1143 aa16.67■□□□□ 0.26
TPM3-206ENST00000330188 MKRN1Q9UHC7 482 aaKnown RBP16.67■□□□□ 0.26
TPM3-206ENST00000330188 LEMD3Q9Y2U8 911 aa16.67■□□□□ 0.26
TPM3-206ENST00000330188 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 CTIFO43310 598 aaKnown RBP16.66■□□□□ 0.26
TPM3-206ENST00000330188 UBASH3AP57075 661 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 NFIXQ14938 502 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
TPM3-206ENST00000330188 TRAPPC3LQ5T215 181 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 RCSD1Q6JBY9 416 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 PDILTQ8N807 584 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 ANKIB1Q9P2G1 1089 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 CBFA2T2O43439 604 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 MORC3Q14149 939 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 DHX8Q14562 1220 aaKnown RBP16.66■□□□□ 0.26
TPM3-206ENST00000330188 CEP135Q66GS9 1140 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 WDR66Q8TBY9 1149 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 SMARCE1Q969G3 411 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 FANCLQ9NW38 375 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 PAXBP1Q9Y5B6 917 aa16.66■□□□□ 0.26
TPM3-206ENST00000330188 NAV1Q8NEY1 1877 aa16.65■□□□□ 0.26
TPM3-206ENST00000330188 A0A087X0B3 334 aa16.65■□□□□ 0.26
TPM3-206ENST00000330188 BMP15O95972 392 aa16.65■□□□□ 0.26
TPM3-206ENST00000330188 SERPINC1P01008 464 aa16.65■□□□□ 0.26
TPM3-206ENST00000330188 LDHBP07195 334 aaKnown RBP16.65■□□□□ 0.26
TPM3-206ENST00000330188 SFPQP23246 707 aaKnown RBP eCLIP16.65■□□□□ 0.26
TPM3-206ENST00000330188 C12orf60Q5U649 245 aa16.65■□□□□ 0.26
TPM3-206ENST00000330188 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
TPM3-206ENST00000330188 SPATA20Q8TB22 786 aa16.65■□□□□ 0.26
TPM3-206ENST00000330188 IGSF3O75054 1194 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 SCG2P13521 617 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 SLC4A8Q2Y0W8 1093 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 FAM196AQ6ZSG2 479 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 CNBD1Q8NA66 436 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 MLKLQ8NB16 471 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 EPSTI1Q96J88 318 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 TRMT1Q9NXH9 659 aaKnown RBP16.64■□□□□ 0.25
TPM3-206ENST00000330188 ROBO3Q96MS0 1386 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 BAZ2BQ9UIF8 2168 aaKnown RBP16.64■□□□□ 0.25
TPM3-206ENST00000330188 XDHP47989 1333 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 PTPN14Q15678 1187 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 GRIK5Q16478 980 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.25
TPM3-206ENST00000330188 CFAP100Q494V2 611 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 TTC38Q5R3I4 469 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 SH3RF3Q8TEJ3 882 aaPredicted RBP16.64■□□□□ 0.25
TPM3-206ENST00000330188 FERMT2Q96AC1 680 aa16.64■□□□□ 0.25
TPM3-206ENST00000330188 USP5P45974 858 aa16.63■□□□□ 0.25
TPM3-206ENST00000330188 FMR1Q06787 632 aaKnown RBP eCLIP16.63■□□□□ 0.25
TPM3-206ENST00000330188 ZNF174Q15697 407 aa16.63■□□□□ 0.25
TPM3-206ENST00000330188 ZNF827Q17R98 1081 aa16.63■□□□□ 0.25
TPM3-206ENST00000330188 E4F1Q66K89 784 aaPredicted RBP16.63■□□□□ 0.25
TPM3-206ENST00000330188 IL17RBQ9NRM6 502 aa16.63■□□□□ 0.25
TPM3-206ENST00000330188 DACH1Q9UI36 760 aa16.63■□□□□ 0.25
TPM3-206ENST00000330188 CDK5RAP2Q96SN8 1893 aa16.63■□□□□ 0.25
TPM3-206ENST00000330188 VEGFAP15692 232 aaPredicted RBP16.63■□□□□ 0.25
TPM3-206ENST00000330188 KCNJ6P48051 423 aa16.63■□□□□ 0.25
TPM3-206ENST00000330188 TFAP4Q01664 338 aa16.63■□□□□ 0.25
TPM3-206ENST00000330188 VSTM4Q8IW00 320 aa16.63■□□□□ 0.25
TPM3-206ENST00000330188 ENOX1Q8TC92 643 aaKnown RBP16.63■□□□□ 0.25
TPM3-206ENST00000330188 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms