RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 USP17L17D6RBQ6 530 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 USP17L19D6RCP7 530 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 USP17L20D6RJB6 530 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 SGPL1O95470 568 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 ELNP15502 786 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 GUCY1A2P33402 732 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 USP17L24Q0WX57 530 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 ZSCAN25Q6NSZ9 544 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 U2AF1L4Q8WU68 220 aaKnown RBP16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 SDR42E1Q8WUS8 393 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 UNC93B1Q9H1C4 597 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 TXNRD2Q9NNW7 524 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 RBPJLQ9UBG7 517 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 GREB1LQ9C091 1923 aaPredicted RBP16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 HMGCRP04035 888 aa16.38■□□□□ 0.21
GTF3C6-201ENST00000329970 XRCC5P13010 732 aaKnown RBP16.38■□□□□ 0.21
GTF3C6-201ENST00000329970 MAPK4P31152 587 aa16.38■□□□□ 0.21
GTF3C6-201ENST00000329970 ERVK-9P63128 1117 aa16.38■□□□□ 0.21
GTF3C6-201ENST00000329970 ERVK-24P63145 666 aa16.38■□□□□ 0.21
GTF3C6-201ENST00000329970 RAB3GAP1Q15042 981 aa16.38■□□□□ 0.21
GTF3C6-201ENST00000329970 CATSPERGQ6ZRH7 1159 aa16.38■□□□□ 0.21
GTF3C6-201ENST00000329970 SOCS4Q8WXH5 440 aa16.38■□□□□ 0.21
GTF3C6-201ENST00000329970 FEZ1Q99689 392 aa16.38■□□□□ 0.21
GTF3C6-201ENST00000329970 ARMT1Q9H993 441 aa16.38■□□□□ 0.21
GTF3C6-201ENST00000329970 ECHDC1Q9NTX5 307 aa16.38■□□□□ 0.21
GTF3C6-201ENST00000329970 RABGAP1Q9Y3P9 1069 aa16.38■□□□□ 0.21
GTF3C6-201ENST00000329970 MBD4O95243 580 aa16.37■□□□□ 0.21
GTF3C6-201ENST00000329970 VCAM1P19320 739 aa16.37■□□□□ 0.21
GTF3C6-201ENST00000329970 POTEEQ6S8J3 1075 aa16.37■□□□□ 0.21
GTF3C6-201ENST00000329970 TMEM179Q6ZVK1 233 aa16.37■□□□□ 0.21
GTF3C6-201ENST00000329970 CRISPLD2Q9H0B8 497 aa16.37■□□□□ 0.21
GTF3C6-201ENST00000329970 ZNF236Q9UL36 1845 aa16.37■□□□□ 0.21
GTF3C6-201ENST00000329970 ALPK3Q96L96 1907 aa16.37■□□□□ 0.21
GTF3C6-201ENST00000329970 SMARCA5O60264 1052 aaPredicted RBP16.36■□□□□ 0.21
GTF3C6-201ENST00000329970 SEPT2Q15019 361 aa16.36■□□□□ 0.21
GTF3C6-201ENST00000329970 TRMT44Q8IYL2 757 aaKnown RBP16.36■□□□□ 0.21
GTF3C6-201ENST00000329970 ACER1Q8TDN7 264 aa16.36■□□□□ 0.21
GTF3C6-201ENST00000329970 USP6NLQ92738 828 aa16.36■□□□□ 0.21
GTF3C6-201ENST00000329970 GPATCH3Q96I76 525 aa16.36■□□□□ 0.21
GTF3C6-201ENST00000329970 CCDC17Q96LX7 622 aa16.36■□□□□ 0.21
GTF3C6-201ENST00000329970 NUDT12Q9BQG2 462 aa16.36■□□□□ 0.21
GTF3C6-201ENST00000329970 FRMPD3Q5JV73 1810 aa16.35■□□□□ 0.21
GTF3C6-201ENST00000329970 EVX2Q03828 476 aa16.35■□□□□ 0.21
GTF3C6-201ENST00000329970 Q3C1V9 767 aa16.35■□□□□ 0.21
GTF3C6-201ENST00000329970 C12orf60Q5U649 245 aa16.35■□□□□ 0.21
GTF3C6-201ENST00000329970 AMOTL1Q8IY63 956 aa16.35■□□□□ 0.21
GTF3C6-201ENST00000329970 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
GTF3C6-201ENST00000329970 HTATIP2Q9BUP3 242 aa16.35■□□□□ 0.21
GTF3C6-201ENST00000329970 RPTORQ8N122 1335 aa16.35■□□□□ 0.21
GTF3C6-201ENST00000329970 PRKAB2O43741 272 aa16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 CNMDO75829 334 aa16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 FARP2O94887 1054 aaPredicted RBP16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 CCNA1P78396 465 aa16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 ZYXQ15942 572 aaKnown RBP16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 SLFNL1Q499Z3 407 aa16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 MORN1Q5T089 497 aa16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 MAP3K21Q5TCX8 1036 aa16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 C16orf86Q6ZW13 317 aa16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 GPR142Q7Z601 462 aa16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 KBTBD3Q8NAB2 608 aa16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 ANKLE1Q8NAG6 615 aa16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 TRIB2Q92519 343 aa16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 PUS7LQ9H0K6 701 aaKnown RBP16.34■□□□□ 0.21
GTF3C6-201ENST00000329970 A0A1W2PRG0 241 aa16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 SPDYE16A6NNV3 312 aaPredicted RBP16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 CYP2D6P10635 497 aa16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 GIMAP6Q6P9H5 292 aa16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 PLEKHH3Q7Z736 793 aa16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 SLC44A5Q8NCS7 719 aa16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 LPAR1Q92633 364 aa16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 DEFB118Q96PH6 123 aa16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 BCL11AQ9H165 835 aa16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 PORCNQ9H237 461 aa16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 RPAP3Q9H6T3 665 aaPredicted RBP16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 HMX1Q9NP08 348 aaPredicted RBP16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 ARPP21Q9UBL0 812 aaPredicted RBP16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 TTC41PQ6P2S7 1318 aa16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 COL11A1P12107 1806 aaPredicted RBP16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 ZNFX1Q9P2E3 1918 aaKnown RBP16.33■□□□□ 0.2
GTF3C6-201ENST00000329970 USP17L12C9JPN9 530 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 USP17L21D6R901 530 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 MPHOSPH10O00566 681 aaKnown RBP16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 GLRX3O76003 335 aaKnown RBP16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 CHGBP05060 677 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 RGS2P41220 211 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 CDK8P49336 464 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 RRP1P56182 461 aaKnown RBP16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 SBK1Q52WX2 424 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 HABP4Q5JVS0 413 aaKnown RBP16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 APPBP2Q92624 585 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 DYNLL2Q96FJ2 89 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 STRBPQ96SI9 672 aaKnown RBP16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 APBA2Q99767 749 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 PAGR1Q9BTK6 254 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 SH2D4AQ9H788 454 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 HOXC10Q9NYD6 342 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 TMX2Q9Y320 296 aa16.32■□□□□ 0.2
GTF3C6-201ENST00000329970 PCDHB15Q9Y5E8 787 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms