RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PDE3AQ14432 1141 aa17.33■□□□□ 0.36
RPP40-201ENST00000319533 PLEKHH3Q7Z736 793 aa17.33■□□□□ 0.36
RPP40-201ENST00000319533 MAGEB6Q8N7X4 407 aa17.33■□□□□ 0.36
RPP40-201ENST00000319533 KIAA1683Q9H0B3 1180 aa17.33■□□□□ 0.36
RPP40-201ENST00000319533 C11orf49Q9H6J7 331 aa17.33■□□□□ 0.36
RPP40-201ENST00000319533 ANTXR1Q9H6X2 564 aa17.33■□□□□ 0.36
RPP40-201ENST00000319533 RABGAP1Q9Y3P9 1069 aa17.33■□□□□ 0.36
RPP40-201ENST00000319533 USP17L15C9J2P7 530 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 USP17L13C9JLJ4 530 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 USP17L11C9JVI0 530 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 USP17L18D6R9N7 530 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 USP17L22D6RA61 530 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 USP17L17D6RBQ6 530 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 USP17L19D6RCP7 530 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 USP17L20D6RJB6 530 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 SOX1O00570 391 aaPredicted RBP17.32■□□□□ 0.36
RPP40-201ENST00000319533 CNMDO75829 334 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 COL6A1P12109 1028 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 RGS2P41220 211 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 USP5P45974 858 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 CACNB2Q08289 660 aaPredicted RBP17.32■□□□□ 0.36
RPP40-201ENST00000319533 USP17L24Q0WX57 530 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 LBX2Q6XYB7 198 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 CATSPERGQ6ZRH7 1159 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 TTC6Q86TZ1 520 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 ERC1Q8IUD2 1116 aa17.32■□□□□ 0.36
RPP40-201ENST00000319533 RIOK1Q9BRS2 568 aaKnown RBP17.32■□□□□ 0.36
RPP40-201ENST00000319533 ZKSCAN1P17029 563 aaPredicted RBP17.31■□□□□ 0.36
RPP40-201ENST00000319533 USP14P54578 494 aa17.31■□□□□ 0.36
RPP40-201ENST00000319533 LHX8Q68G74 356 aa17.31■□□□□ 0.36
RPP40-201ENST00000319533 C7orf61Q8IZ16 206 aa17.31■□□□□ 0.36
RPP40-201ENST00000319533 APBA2Q99767 749 aa17.31■□□□□ 0.36
RPP40-201ENST00000319533 PAGR1Q9BTK6 254 aa17.31■□□□□ 0.36
RPP40-201ENST00000319533 NDUFB9Q9Y6M9 179 aa17.31■□□□□ 0.36
RPP40-201ENST00000319533 PFASO15067 1338 aa17.3■□□□□ 0.36
RPP40-201ENST00000319533 SHMT1P34896 483 aa17.3■□□□□ 0.36
RPP40-201ENST00000319533 PLCD1P51178 756 aa17.3■□□□□ 0.36
RPP40-201ENST00000319533 GABPAQ06546 454 aa17.3■□□□□ 0.36
RPP40-201ENST00000319533 MAP2K5Q13163 448 aa17.3■□□□□ 0.36
RPP40-201ENST00000319533 CCL14Q16627 93 aa17.3■□□□□ 0.36
RPP40-201ENST00000319533 CERKLQ49MI3 558 aaPredicted RBP17.3■□□□□ 0.36
RPP40-201ENST00000319533 VCAM1P19320 739 aa17.29■□□□□ 0.36
RPP40-201ENST00000319533 CCND3P30281 292 aaPredicted RBP17.29■□□□□ 0.36
RPP40-201ENST00000319533 GUCY1A2P33402 732 aa17.29■□□□□ 0.36
RPP40-201ENST00000319533 CCNA1P78396 465 aa17.29■□□□□ 0.36
RPP40-201ENST00000319533 ABCB5Q2M3G0 1257 aa17.29■□□□□ 0.36
RPP40-201ENST00000319533 GPR153Q6NV75 609 aa17.29■□□□□ 0.36
RPP40-201ENST00000319533 AACSQ86V21 672 aa17.29■□□□□ 0.36
RPP40-201ENST00000319533 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
RPP40-201ENST00000319533 ACER1Q8TDN7 264 aa17.29■□□□□ 0.36
RPP40-201ENST00000319533 FEZ1Q99689 392 aa17.29■□□□□ 0.36
RPP40-201ENST00000319533 ZMYND8Q9ULU4 1186 aaPredicted RBP17.29■□□□□ 0.36
RPP40-201ENST00000319533 EXOC6BQ9Y2D4 811 aa17.29■□□□□ 0.36
RPP40-201ENST00000319533 SLC15A5A6NIM6 579 aa17.28■□□□□ 0.36
RPP40-201ENST00000319533 GLRX3O76003 335 aaKnown RBP17.28■□□□□ 0.36
RPP40-201ENST00000319533 IGHA2P01877 340 aa17.28■□□□□ 0.36
RPP40-201ENST00000319533 HOXC6P09630 235 aa17.28■□□□□ 0.36
RPP40-201ENST00000319533 PTPREP23469 700 aa17.28■□□□□ 0.36
RPP40-201ENST00000319533 RAB3GAP1Q15042 981 aa17.28■□□□□ 0.36
RPP40-201ENST00000319533 TTF1Q15361 905 aaPredicted RBP17.28■□□□□ 0.36
RPP40-201ENST00000319533 HSP90AB4PQ58FF6 505 aa17.28■□□□□ 0.36
RPP40-201ENST00000319533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.28■□□□□ 0.36
RPP40-201ENST00000319533 EDC3Q96F86 508 aaKnown RBP17.28■□□□□ 0.36
RPP40-201ENST00000319533 LRCH3Q96II8 777 aa17.28■□□□□ 0.36
RPP40-201ENST00000319533 CABP5Q9NP86 173 aa17.28■□□□□ 0.36
RPP40-201ENST00000319533 ZYXQ15942 572 aaKnown RBP17.27■□□□□ 0.36
RPP40-201ENST00000319533 LRIT3Q3SXY7 679 aa17.27■□□□□ 0.36
RPP40-201ENST00000319533 RHPN1Q8TCX5 695 aa17.27■□□□□ 0.36
RPP40-201ENST00000319533 BTBD7Q9P203 1132 aa17.27■□□□□ 0.36
RPP40-201ENST00000319533 MAGEB6P1A0A0J9YX57 407 aa17.26■□□□□ 0.35
RPP40-201ENST00000319533 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
RPP40-201ENST00000319533 PDE6AP16499 860 aa17.26■□□□□ 0.35
RPP40-201ENST00000319533 MAGEA10P43363 369 aaPredicted RBP17.26■□□□□ 0.35
RPP40-201ENST00000319533 GRB14Q14449 540 aa17.26■□□□□ 0.35
RPP40-201ENST00000319533 FLRT1Q9NZU1 646 aa17.26■□□□□ 0.35
RPP40-201ENST00000319533 COL6A3P12111 3177 aa17.25■□□□□ 0.35
RPP40-201ENST00000319533 TCRBV5S4A2TA0A5A2 114 aa17.25■□□□□ 0.35
RPP40-201ENST00000319533 SYN1P17600 705 aa17.25■□□□□ 0.35
RPP40-201ENST00000319533 SLC9C2Q5TAH2 1124 aa17.25■□□□□ 0.35
RPP40-201ENST00000319533 MFSD14CQ5VZR4 134 aa17.25■□□□□ 0.35
RPP40-201ENST00000319533 PANK1Q8TE04 598 aa17.25■□□□□ 0.35
RPP40-201ENST00000319533 CRNKL1Q9BZJ0 848 aaKnown RBP17.25■□□□□ 0.35
RPP40-201ENST00000319533 RPAP3Q9H6T3 665 aaPredicted RBP17.25■□□□□ 0.35
RPP40-201ENST00000319533 IL1RAPL2Q9NP60 686 aa17.25■□□□□ 0.35
RPP40-201ENST00000319533 NAV1Q8NEY1 1877 aa17.24■□□□□ 0.35
RPP40-201ENST00000319533 A0A1W2PRG0 241 aa17.24■□□□□ 0.35
RPP40-201ENST00000319533 POLR3DP05423 398 aaPredicted RBP17.24■□□□□ 0.35
RPP40-201ENST00000319533 SEPT2Q15019 361 aa17.24■□□□□ 0.35
RPP40-201ENST00000319533 LRRC26Q2I0M4 334 aa17.24■□□□□ 0.35
RPP40-201ENST00000319533 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
RPP40-201ENST00000319533 FRMPD3Q5JV73 1810 aa17.24■□□□□ 0.35
RPP40-201ENST00000319533 MSCO60682 206 aa17.23■□□□□ 0.35
RPP40-201ENST00000319533 ABCB7O75027 752 aa17.23■□□□□ 0.35
RPP40-201ENST00000319533 EVX2Q03828 476 aa17.23■□□□□ 0.35
RPP40-201ENST00000319533 RPAP2Q8IXW5 612 aaPredicted RBP17.23■□□□□ 0.35
RPP40-201ENST00000319533 TDHQ8IZJ6 230 aa17.23■□□□□ 0.35
RPP40-201ENST00000319533 CLASRPQ8N2M8 674 aaKnown RBP17.23■□□□□ 0.35
RPP40-201ENST00000319533 NPLOC4Q8TAT6 608 aa17.23■□□□□ 0.35
RPP40-201ENST00000319533 KIF1BPQ96EK5 621 aa17.23■□□□□ 0.35
RPP40-201ENST00000319533 DCP1AQ9NPI6 582 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms