RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 SASH3O75995 380 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 TBC1D8O95759 1140 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 SNRPA1P09661 255 aaKnown RBP8.47□□□□□ -1.05
CDHR3-201ENST00000317716 HSPD1P10809 573 aaKnown RBP8.47□□□□□ -1.05
CDHR3-201ENST00000317716 CKAP4Q07065 602 aaKnown RBP8.47□□□□□ -1.05
CDHR3-201ENST00000317716 PI16Q6UXB8 463 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 KBTBD3Q8NAB2 608 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 TBC1D31Q96DN5 1066 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 LLPHQ9BRT6 129 aaKnown RBP8.47□□□□□ -1.05
CDHR3-201ENST00000317716 GOLGA6L10A0A0M3HER8 536 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 E7EVH7 732 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 TEX33O43247 280 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 KIF4AO95239 1232 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 CYLC1P35663 651 aaPredicted RBP8.47□□□□□ -1.05
CDHR3-201ENST00000317716 UBA7P41226 1012 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 ACTN3Q08043 901 aaPredicted RBP8.47□□□□□ -1.05
CDHR3-201ENST00000317716 PDCLQ13371 301 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 WTAPQ15007 396 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 CPLX4Q7Z7G2 160 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 VSTM4Q8IW00 320 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 CAPS2Q9BXY5 557 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 PHLPP1O60346 1717 aa8.47□□□□□ -1.05
CDHR3-201ENST00000317716 STARD3NLO95772 234 aa8.46□□□□□ -1.05
CDHR3-201ENST00000317716 EZRP15311 586 aaKnown RBP8.46□□□□□ -1.05
CDHR3-201ENST00000317716 MAGEA9P43362 315 aa8.46□□□□□ -1.05
CDHR3-201ENST00000317716 EIF4A1P60842 406 aaKnown RBP8.46□□□□□ -1.05
CDHR3-201ENST00000317716 MAP2K1Q02750 393 aaPredicted RBP8.46□□□□□ -1.05
CDHR3-201ENST00000317716 ST3GAL1Q11201 340 aa8.46□□□□□ -1.05
CDHR3-201ENST00000317716 KLHL7Q8IXQ5 586 aa8.46□□□□□ -1.05
CDHR3-201ENST00000317716 JAKMIP2Q96AA8 810 aa8.46□□□□□ -1.05
CDHR3-201ENST00000317716 SELENOSQ9BQE4 189 aa8.46□□□□□ -1.05
CDHR3-201ENST00000317716 TRMT112Q9UI30 125 aaKnown RBP8.46□□□□□ -1.05
CDHR3-201ENST00000317716 ADCY9O60503 1353 aa8.46□□□□□ -1.05
CDHR3-201ENST00000317716 CARMIL3Q8ND23 1372 aa8.46□□□□□ -1.05
CDHR3-201ENST00000317716 OPA1O60313 960 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 CALRP27797 417 aaKnown RBP8.46□□□□□ -1.06
CDHR3-201ENST00000317716 CYP27A1Q02318 531 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 CTDSPL2Q05D32 466 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 C2orf54Q08AI8 447 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 IFT88Q13099 833 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 IFIT5Q13325 482 aaKnown RBP8.46□□□□□ -1.06
CDHR3-201ENST00000317716 VPS72Q15906 364 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 MFSD6Q6ZSS7 791 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 EP400NLQ6ZTU2 488 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 FMR1NBQ8N0W7 255 aaPredicted RBP8.46□□□□□ -1.06
CDHR3-201ENST00000317716 FAM71BQ8TC56 605 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 FAM89AQ96GI7 184 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 ALS2CR12Q96Q35 445 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 UBA5Q9GZZ9 404 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 VAT1LQ9HCJ6 419 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 TFR2Q9UP52 801 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 SAR1BQ9Y6B6 198 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 MYOM1P52179 1685 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 SPATA31A5Q5VU36 1347 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 SPATA31A7Q8IWB4 1347 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 LTBP4Q8N2S1 1624 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 BACH1O14867 736 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 GPAA1O43292 621 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 STX10O60499 249 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 TACC1O75410 805 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 CMA1P23946 247 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 STAT6P42226 847 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 OSBPL5Q9H0X9 879 aaPredicted RBP8.46□□□□□ -1.06
CDHR3-201ENST00000317716 RTEL1Q9NZ71 1219 aa8.46□□□□□ -1.06
CDHR3-201ENST00000317716 IQSEC2Q5JU85 1478 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 PXDNQ92626 1479 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 G3V3G9 751 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 H2AFXP16104 143 aaPredicted RBP8.45□□□□□ -1.06
CDHR3-201ENST00000317716 VAV2P52735 878 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 DCAF8Q5TAQ9 597 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 CTAGE1Q96RT6 745 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 MRPL44Q9H9J2 332 aaKnown RBP8.45□□□□□ -1.06
CDHR3-201ENST00000317716 VPS54Q9P1Q0 977 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 TTF2Q9UNY4 1162 aaKnown RBP8.45□□□□□ -1.06
CDHR3-201ENST00000317716 PARP3Q9Y6F1 533 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 CRB1P82279 1406 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 CAMTA1Q9Y6Y1 1673 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 USP5P45974 858 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 TBC1D8BQ0IIM8 1120 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 NR5A1Q13285 461 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 C8orf74Q6P047 294 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 TADA2BQ86TJ2 420 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 CTCFLQ8NI51 663 aaPredicted RBP8.45□□□□□ -1.06
CDHR3-201ENST00000317716 UBLCP1Q8WVY7 318 aaPredicted RBP8.45□□□□□ -1.06
CDHR3-201ENST00000317716 INCENPQ9NQS7 918 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 SLC4A4Q9Y6R1 1079 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 ZAP70P43403 619 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 TRMT1LQ7Z2T5 733 aaKnown RBP8.45□□□□□ -1.06
CDHR3-201ENST00000317716 MLKLQ8NB16 471 aa8.45□□□□□ -1.06
CDHR3-201ENST00000317716 UHMK1Q8TAS1 419 aaKnown RBP8.45□□□□□ -1.06
CDHR3-201ENST00000317716 CUTAO60888 179 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 FGAP02671 866 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 ATL3Q6DD88 541 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 KANK3Q6NY19 840 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 CYP26C1Q6V0L0 522 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 STOX1Q6ZVD7 989 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 RPAINQ86UA6 219 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 FAM207AQ9NSI2 230 aaPredicted RBP8.44□□□□□ -1.06
CDHR3-201ENST00000317716 ANGEL1Q9UNK9 670 aaKnown RBP8.44□□□□□ -1.06
CDHR3-201ENST00000317716 FAM169AQ9Y6X4 670 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms