RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 KIAA0825Q8IV33 1275 aa27.33■■□□□ 1.97
SNCB-201ENST00000310112 LZTS2Q9BRK4 669 aa27.33■■□□□ 1.97
SNCB-201ENST00000310112 DDX19AQ9NUU7 478 aaKnown RBP27.33■■□□□ 1.97
SNCB-201ENST00000310112 MYH6P13533 1939 aa27.32■■□□□ 1.96
SNCB-201ENST00000310112 PICALMQ13492 652 aa27.32■■□□□ 1.96
SNCB-201ENST00000310112 GRM4Q14833 912 aa27.32■■□□□ 1.96
SNCB-201ENST00000310112 SLC4A8Q2Y0W8 1093 aa27.32■■□□□ 1.96
SNCB-201ENST00000310112 GAS2L3Q86XJ1 694 aa27.32■■□□□ 1.96
SNCB-201ENST00000310112 FAM177A1Q8N128 213 aaPredicted RBP27.32■■□□□ 1.96
SNCB-201ENST00000310112 SLC44A5Q8NCS7 719 aa27.32■■□□□ 1.96
SNCB-201ENST00000310112 KCNQ5Q9NR82 932 aa27.32■■□□□ 1.96
SNCB-201ENST00000310112 SERPINB13Q9UIV8 391 aa27.32■■□□□ 1.96
SNCB-201ENST00000310112 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.31■■□□□ 1.96
SNCB-201ENST00000310112 DDX4Q9NQI0 724 aaKnown RBP27.31■■□□□ 1.96
SNCB-201ENST00000310112 LARGE2Q8N3Y3 721 aa27.3■■□□□ 1.96
SNCB-201ENST00000310112 CNTNAP5Q8WYK1 1306 aa27.29■■□□□ 1.96
SNCB-201ENST00000310112 COL2A1P02458 1487 aaPredicted RBP27.29■■□□□ 1.96
SNCB-201ENST00000310112 SYCE3A1L190 88 aa27.29■■□□□ 1.96
SNCB-201ENST00000310112 YDJCA8MPS7 323 aa27.29■■□□□ 1.96
SNCB-201ENST00000310112 KIF28PB7ZC32 967 aa27.29■■□□□ 1.96
SNCB-201ENST00000310112 VIL1P09327 827 aaKnown RBP27.29■■□□□ 1.96
SNCB-201ENST00000310112 TOP1P11387 765 aaKnown RBP27.29■■□□□ 1.96
SNCB-201ENST00000310112 RSBN1LQ6PCB5 846 aaPredicted RBP27.29■■□□□ 1.96
SNCB-201ENST00000310112 LINC00301Q8NCQ3 95 aa27.29■■□□□ 1.96
SNCB-201ENST00000310112 PGBD1Q96JS3 809 aa27.29■■□□□ 1.96
SNCB-201ENST00000310112 CCDC17Q96LX7 622 aa27.29■■□□□ 1.96
SNCB-201ENST00000310112 ZBTB7AO95365 584 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 PLEKHA8P1O95397 391 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 SMARCA1P28370 1054 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 GUCY1A2P33402 732 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 MMP14P50281 582 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 STK38Q15208 465 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 PKN1Q16512 942 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 DALRD3Q5D0E6 543 aaKnown RBP27.28■■□□□ 1.96
SNCB-201ENST00000310112 ANO1Q5XXA6 986 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 NOSTRINQ8IVI9 506 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 BICD2Q8TD16 824 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 TMEM47Q9BQJ4 181 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 GJB4Q9NTQ9 266 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 HDAC9Q9UKV0 1011 aa27.28■■□□□ 1.96
SNCB-201ENST00000310112 A0A1W2PQ27 194 aa27.27■■□□□ 1.96
SNCB-201ENST00000310112 A0A1W2PQ64 194 aa27.27■■□□□ 1.96
SNCB-201ENST00000310112 A0A1W2PQD8 194 aa27.27■■□□□ 1.96
SNCB-201ENST00000310112 ENTPD3O75355 529 aa27.27■■□□□ 1.96
SNCB-201ENST00000310112 RBM5P52756 815 aaKnown RBP eCLIP27.27■■□□□ 1.96
SNCB-201ENST00000310112 SRBD1Q8N5C6 995 aaKnown RBP27.27■■□□□ 1.96
SNCB-201ENST00000310112 JMYQ8N9B5 988 aa27.27■■□□□ 1.96
SNCB-201ENST00000310112 BRMS1Q9HCU9 246 aa27.27■■□□□ 1.96
SNCB-201ENST00000310112 CD2APQ9Y5K6 639 aa27.27■■□□□ 1.96
SNCB-201ENST00000310112 V9GY48 417 aaPredicted RBP27.27■■□□□ 1.96
SNCB-201ENST00000310112 ADAMTSL1Q8N6G6 1762 aa27.27■■□□□ 1.96
SNCB-201ENST00000310112 ADALQ6DHV7 355 aa27.26■■□□□ 1.95
SNCB-201ENST00000310112 DIS3L2Q8IYB7 885 aaKnown RBP27.26■■□□□ 1.95
SNCB-201ENST00000310112 CCDC82Q8N4S0 544 aa27.26■■□□□ 1.95
SNCB-201ENST00000310112 TSPY26PQ9H489 355 aa27.26■■□□□ 1.95
SNCB-201ENST00000310112 STX8Q9UNK0 236 aa27.26■■□□□ 1.95
SNCB-201ENST00000310112 MYH8P13535 1937 aa27.26■■□□□ 1.95
SNCB-201ENST00000310112 SPTLC2O15270 562 aa27.25■■□□□ 1.95
SNCB-201ENST00000310112 XRCC6P12956 609 aaKnown RBP eCLIP27.25■■□□□ 1.95
SNCB-201ENST00000310112 SF3A1Q15459 793 aaKnown RBP27.25■■□□□ 1.95
SNCB-201ENST00000310112 NIM1KQ8IY84 436 aa27.25■■□□□ 1.95
SNCB-201ENST00000310112 PHF20Q9BVI0 1012 aa27.25■■□□□ 1.95
SNCB-201ENST00000310112 NUP62CLQ9H1M0 184 aa27.25■■□□□ 1.95
SNCB-201ENST00000310112 SH3GLB2Q9NR46 395 aa27.25■■□□□ 1.95
SNCB-201ENST00000310112 PI4KBQ9UBF8 816 aa27.25■■□□□ 1.95
SNCB-201ENST00000310112 ZNRF3Q9ULT6 936 aa27.25■■□□□ 1.95
SNCB-201ENST00000310112 IGKV6D-41A0A0C4DH26 115 aa27.24■■□□□ 1.95
SNCB-201ENST00000310112 ME1P48163 572 aa27.24■■□□□ 1.95
SNCB-201ENST00000310112 CEBPZQ03701 1054 aaKnown RBP27.24■■□□□ 1.95
SNCB-201ENST00000310112 SLC39A14Q15043 492 aa27.24■■□□□ 1.95
SNCB-201ENST00000310112 PFKFB3Q16875 520 aaPredicted RBP27.24■■□□□ 1.95
SNCB-201ENST00000310112 RILPL1Q5EBL4 403 aa27.24■■□□□ 1.95
SNCB-201ENST00000310112 FOXP4Q8IVH2 680 aaPredicted RBP27.24■■□□□ 1.95
SNCB-201ENST00000310112 CMTR1Q8N1G2 835 aaKnown RBP27.24■■□□□ 1.95
SNCB-201ENST00000310112 ATF5Q9Y2D1 282 aaPredicted RBP27.24■■□□□ 1.95
SNCB-201ENST00000310112 PALM3A6NDB9 673 aaPredicted RBP27.23■■□□□ 1.95
SNCB-201ENST00000310112 PPP6R2O75170 966 aa27.23■■□□□ 1.95
SNCB-201ENST00000310112 SCG2P13521 617 aa27.23■■□□□ 1.95
SNCB-201ENST00000310112 CFAP100Q494V2 611 aa27.23■■□□□ 1.95
SNCB-201ENST00000310112 CCDC73Q6ZRK6 1079 aa27.23■■□□□ 1.95
SNCB-201ENST00000310112 AGBL3Q8NEM8 1001 aa27.23■■□□□ 1.95
SNCB-201ENST00000310112 GMLQ99445 158 aa27.23■■□□□ 1.95
SNCB-201ENST00000310112 CLIC4Q9Y696 253 aa27.23■■□□□ 1.95
SNCB-201ENST00000310112 MORC2Q9Y6X9 1032 aaPredicted RBP27.23■■□□□ 1.95
SNCB-201ENST00000310112 BRCA1P38398 1863 aaKnown RBP27.23■■□□□ 1.95
SNCB-201ENST00000310112 LIG1P18858 919 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 KRT2P35908 639 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 CEP95Q96GE4 821 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 SPZ1Q9BXG8 430 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 ZNF277Q9NRM2 450 aaPredicted RBP27.22■■□□□ 1.95
SNCB-201ENST00000310112 MTMR4Q9NYA4 1195 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 TMOD2Q9NZR1 351 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 MAD2L2Q9UI95 211 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 CTAGE5O15320 804 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 SHMT1P34896 483 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 NFIAQ12857 509 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 CLSTN2Q9H4D0 955 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 DACT1Q9NYF0 836 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 FAM198AQ9UFP1 575 aa27.22■■□□□ 1.95
SNCB-201ENST00000310112 ATRNL1Q5VV63 1379 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms