RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 AKAP2Q9Y2D5 859 aa11.77□□□□□ -0.52
MSRB3-201ENST00000308259 ARHGAP25P42331 645 aa11.77□□□□□ -0.53
MSRB3-201ENST00000308259 MPHOSPH8Q99549 860 aa11.77□□□□□ -0.53
MSRB3-201ENST00000308259 TACO1Q9BSH4 297 aaKnown RBP11.77□□□□□ -0.53
MSRB3-201ENST00000308259 CEP126Q9P2H0 1117 aa11.77□□□□□ -0.53
MSRB3-201ENST00000308259 SH3TC1Q8TE82 1336 aa11.77□□□□□ -0.53
MSRB3-201ENST00000308259 CCDC189A1A4V9 331 aa11.77□□□□□ -0.53
MSRB3-201ENST00000308259 CTAGE5O15320 804 aa11.77□□□□□ -0.53
MSRB3-201ENST00000308259 CA8P35219 290 aa11.77□□□□□ -0.53
MSRB3-201ENST00000308259 CASP8Q14790 479 aa11.77□□□□□ -0.53
MSRB3-201ENST00000308259 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.53
MSRB3-201ENST00000308259 HELLSQ9NRZ9 838 aa11.77□□□□□ -0.53
MSRB3-201ENST00000308259 C5P01031 1676 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 H7C1W4 665 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 UBASH3AP57075 661 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 ARMC9Q7Z3E5 817 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 PHKBQ93100 1093 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 XAGE2Q96GT9 111 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 HINFPQ9BQA5 517 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 FUT8Q9BYC5 575 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 SENP2Q9HC62 589 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 SOS2Q07890 1332 aaPredicted RBP11.76□□□□□ -0.53
MSRB3-201ENST00000308259 RGPD5Q99666 1765 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 PALLDQ8WX93 1383 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 FOXP2O15409 715 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 SF3A3Q12874 501 aaKnown RBP eCLIP11.76□□□□□ -0.53
MSRB3-201ENST00000308259 TRAF1Q13077 416 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 SNX1Q13596 522 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 SPECC1Q5M775 1068 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 IL15P40933 162 aaPredicted RBP11.76□□□□□ -0.53
MSRB3-201ENST00000308259 CCDC57Q2TAC2 916 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 GNPTABQ3T906 1256 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 CCDC82Q8N4S0 544 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 LLPHQ9BRT6 129 aaKnown RBP11.76□□□□□ -0.53
MSRB3-201ENST00000308259 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 PSDA5PKW4 1024 aaPredicted RBP11.76□□□□□ -0.53
MSRB3-201ENST00000308259 CBFA2T2O43439 604 aa11.76□□□□□ -0.53
MSRB3-201ENST00000308259 CCNHP51946 323 aaPredicted RBP11.75□□□□□ -0.53
MSRB3-201ENST00000308259 CCZ1BP86790 482 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 CCZ1P86791 482 aaPredicted RBP11.75□□□□□ -0.53
MSRB3-201ENST00000308259 ZNF569Q5MCW4 686 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 E4F1Q66K89 784 aaPredicted RBP11.75□□□□□ -0.53
MSRB3-201ENST00000308259 FMR1NBQ8N0W7 255 aaPredicted RBP11.75□□□□□ -0.53
MSRB3-201ENST00000308259 CAPS2Q9BXY5 557 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 GOLGA6L9A6NEM1 432 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 ATP1A3P13637 1013 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 HSPA1LP34931 641 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 STIM1Q13586 685 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 CRYMQ14894 314 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 TMEM132AQ24JP5 1023 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 OLFM4Q6UX06 510 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 PNMA8AQ86V59 439 aaPredicted RBP11.75□□□□□ -0.53
MSRB3-201ENST00000308259 PARD3BQ8TEW8 1205 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 DHX58Q96C10 678 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 RTCBQ9Y3I0 505 aaKnown RBP11.75□□□□□ -0.53
MSRB3-201ENST00000308259 SNAP23O00161 211 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 ATP1A2P50993 1020 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 ODF2Q5BJF6 829 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 LINC00301Q8NCQ3 95 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 ADAMTSL3P82987 1691 aa11.75□□□□□ -0.53
MSRB3-201ENST00000308259 AFF2P51816 1311 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 SNUPNO95149 360 aaKnown RBP11.74□□□□□ -0.53
MSRB3-201ENST00000308259 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 RALYLQ86SE5 291 aaKnown RBP11.74□□□□□ -0.53
MSRB3-201ENST00000308259 MICU3Q86XE3 530 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 HELBQ8NG08 1087 aaPredicted RBP11.74□□□□□ -0.53
MSRB3-201ENST00000308259 CLIC6Q96NY7 704 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 DESI2Q9BSY9 194 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 HOOK1Q9UJC3 728 aaKnown RBP11.74□□□□□ -0.53
MSRB3-201ENST00000308259 SPTLC2O15270 562 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 IDH1O75874 414 aaKnown RBP11.74□□□□□ -0.53
MSRB3-201ENST00000308259 ANTXR2P58335 489 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 IFT88Q13099 833 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
MSRB3-201ENST00000308259 RRP12Q5JTH9 1297 aaKnown RBP11.74□□□□□ -0.53
MSRB3-201ENST00000308259 SPDYE1Q8NFV5 336 aaPredicted RBP11.74□□□□□ -0.53
MSRB3-201ENST00000308259 L2HGDHQ9H9P8 463 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 SALL1Q9NSC2 1324 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 SMIM24O75264 130 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 RNF168Q8IYW5 571 aaPredicted RBP11.74□□□□□ -0.53
MSRB3-201ENST00000308259 ITFG2Q969R8 447 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 HPS5Q9UPZ3 1129 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 CCDC40Q4G0X9 1142 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 IQUBQ8NA54 791 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 KAT2BQ92831 832 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 KLC4Q9NSK0 619 aa11.74□□□□□ -0.53
MSRB3-201ENST00000308259 ZNF202O95125 648 aa11.73□□□□□ -0.53
MSRB3-201ENST00000308259 SLC3A2P08195 630 aaKnown RBP11.73□□□□□ -0.53
MSRB3-201ENST00000308259 MYBL2P10244 700 aa11.73□□□□□ -0.53
MSRB3-201ENST00000308259 FLAD1Q8NFF5 587 aa11.73□□□□□ -0.53
MSRB3-201ENST00000308259 KIAA1468Q9P260 1216 aa11.73□□□□□ -0.53
MSRB3-201ENST00000308259 TPX2Q9ULW0 747 aaKnown RBP11.73□□□□□ -0.53
MSRB3-201ENST00000308259 MROH7-TTC4A0A0A0MT08 1334 aa11.73□□□□□ -0.53
MSRB3-201ENST00000308259 GPAA1O43292 621 aa11.73□□□□□ -0.53
MSRB3-201ENST00000308259 MYSM1Q5VVJ2 828 aa11.73□□□□□ -0.53
MSRB3-201ENST00000308259 CAPRIN2Q6IMN6 1127 aaKnown RBP11.73□□□□□ -0.53
MSRB3-201ENST00000308259 PPFIBP1Q86W92 1011 aa11.73□□□□□ -0.53
MSRB3-201ENST00000308259 TRIM4Q9C037 500 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms