RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 VSIG10Q8N0Z9 540 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 WHAMMQ8TF30 809 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 CCDC124Q96CT7 223 aaKnown RBP4.46□□□□□ -1.7
USH2A-201ENST00000307340 DDX21Q9NR30 783 aaKnown RBP eCLIP4.46□□□□□ -1.7
USH2A-201ENST00000307340 ABCC6O95255 1503 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 PER1O15534 1290 aaPredicted RBP4.46□□□□□ -1.7
USH2A-201ENST00000307340 MCF2L2Q86YR7 1114 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 SAMD3Q8N6K7 520 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 EFHBQ8N7U6 833 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 NFATC2IPQ8NCF5 419 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 PPP6R2O75170 966 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 ATP5BP06576 529 aaKnown RBP4.46□□□□□ -1.7
USH2A-201ENST00000307340 RASSF7Q02833 373 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 PUM3Q15397 648 aaKnown RBP4.46□□□□□ -1.7
USH2A-201ENST00000307340 PLBD2Q8NHP8 589 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 KIF9Q9HAQ2 790 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 GIPC1O14908 333 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 KRT79Q5XKE5 535 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 ALS2CLQ60I27 953 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 KLHL10Q6JEL2 608 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 SV2BQ7L1I2 683 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 PCGF5Q86SE9 256 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 BAG1Q99933 345 aaPredicted RBP4.46□□□□□ -1.7
USH2A-201ENST00000307340 RNF26Q9BY78 433 aaPredicted RBP4.46□□□□□ -1.7
USH2A-201ENST00000307340 MAD1L1Q9Y6D9 718 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 MED23Q9ULK4 1368 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 ABCC4O15439 1325 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 PPARGP37231 505 aaPredicted RBP4.46□□□□□ -1.7
USH2A-201ENST00000307340 PHLDB3Q6NSJ2 640 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 CRACR2BQ8N4Y2 399 aaPredicted RBP4.46□□□□□ -1.7
USH2A-201ENST00000307340 STK17AQ9UEE5 414 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 NDUFAB1O14561 156 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 TOMM70O94826 608 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 INF2Q27J81 1249 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 CCDC96Q2M329 555 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 OTUD6BQ8N6M0 293 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 CNKSR2Q8WXI2 1034 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 ABCF3Q9NUQ8 709 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 A0A1W2PRG0 241 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 GOLGA8KD6RF30 607 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 STMN1P16949 149 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 SEL1L2Q5TEA6 688 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 OTUD6AQ7L8S5 288 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 STMN2Q93045 179 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 PAG1Q9NWQ8 432 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 ANKIB1Q9P2G1 1089 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 STAP2Q9UGK3 403 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 AKR1B10O60218 316 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 SYT1P21579 422 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 CCDC17Q96LX7 622 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 RRAGBQ5VZM2 374 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 KRT25Q7Z3Z0 450 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 ZNF644Q9H582 1327 aaPredicted RBP4.45□□□□□ -1.7
USH2A-201ENST00000307340 RAB3IL1Q8TBN0 382 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 GOPCQ9HD26 462 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 AFDNP55196 1824 aaKnown RBP4.45□□□□□ -1.7
USH2A-201ENST00000307340 MKRN3Q13064 507 aaKnown RBP4.45□□□□□ -1.7
USH2A-201ENST00000307340 BIRC3Q13489 604 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 CCDC62Q6P9F0 684 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 CCDC121Q6ZUS5 278 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 TMX3Q96JJ7 454 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 VIPAS39Q9H9C1 493 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 TMEM67Q5HYA8 995 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 PROSER2Q86WR7 435 aaPredicted RBP4.45□□□□□ -1.7
USH2A-201ENST00000307340 CEP63Q96MT8 703 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 GJB2P29033 226 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 LAMB3Q13751 1172 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 SPRYD3Q8NCJ5 442 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 IP6K1Q92551 441 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 TESK2Q96S53 571 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 PPP1R9BQ96SB3 815 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 AKAP12Q02952 1782 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 DDAH1O94760 285 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 FAM71BQ8TC56 605 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 LRRC59Q96AG4 307 aaKnown RBP4.45□□□□□ -1.7
USH2A-201ENST00000307340 SEPT11Q9NVA2 429 aaKnown RBP4.45□□□□□ -1.7
USH2A-201ENST00000307340 MAP3K20Q9NYL2 800 aaKnown RBP4.45□□□□□ -1.7
USH2A-201ENST00000307340 LDHAL6AQ6ZMR3 332 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 OPTNQ96CV9 577 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 TULP4Q9NRJ4 1543 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 IFIT3O14879 490 aaKnown RBP4.45□□□□□ -1.7
USH2A-201ENST00000307340 DTX3LQ8TDB6 740 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 PCDHB13Q9Y5F0 798 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 TSPY2A6NKD2 308 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 NOP14P78316 857 aaKnown RBP4.45□□□□□ -1.7
USH2A-201ENST00000307340 POSTNQ15063 836 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 PRPF38AQ8NAV1 312 aaKnown RBP4.45□□□□□ -1.7
USH2A-201ENST00000307340 MCM9Q9NXL9 1143 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 MYH15Q9Y2K3 1946 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 FER1L4A9Z1Z3 1794 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 NUTM2FA1L443 756 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 TTI1O43156 1089 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 MAPK6Q16659 721 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 APPBP2Q92624 585 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 TRIM47Q96LD4 638 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 BCL2L13Q9BXK5 485 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 KIAA1586Q9HCI6 787 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 ATP6V0A2Q9Y487 856 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 ABCB11O95342 1321 aa4.45□□□□□ -1.7
USH2A-201ENST00000307340 FOSP01100 380 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms