RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 MYOM2P54296 1465 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 STRN3Q13033 797 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 TSC1Q92574 1164 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 CALCRLQ16602 461 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 GEN1Q17RS7 908 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 TTC6Q86TZ1 520 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 SPZ1Q9BXG8 430 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 PPP1R12CQ9BZL4 782 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 CNOT10Q9H9A5 744 aaKnown RBP8.45□□□□□ -1.06
SF3B3-201ENST00000302516 DDX41Q9UJV9 622 aaKnown RBP8.45□□□□□ -1.06
SF3B3-201ENST00000302516 ARHGAP31Q2M1Z3 1444 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 PPFIA2O75334 1257 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 STX2P32856 288 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 TCHPQ9BT92 498 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 MROH5Q6ZUA9 1318 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 P4HA1P13674 534 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 CCDC125Q86Z20 511 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 CDC42BPAQ5VT25 1732 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 KCNJ18B7U540 433 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 TCP1P17987 556 aaKnown RBP8.44□□□□□ -1.06
SF3B3-201ENST00000302516 KCNJ12Q14500 433 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 SLC17A8Q8NDX2 589 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 MIS12Q9H081 205 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-201ENST00000302516 PNMA8AQ86V59 439 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-201ENST00000302516 EYA3Q99504 573 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 PPANQ9NQ55 473 aaKnown RBP8.44□□□□□ -1.06
SF3B3-201ENST00000302516 KRT9P35527 623 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 ADCY7P51828 1080 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 BIRC3Q13489 604 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 ZNF174Q15697 407 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 PHF23Q9BUL5 403 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-201ENST00000302516 METTL22Q9BUU2 404 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-201ENST00000302516 VPS16Q9H269 839 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 TET3O43151 1660 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 DNAJC8O75937 253 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-201ENST00000302516 KLHL30Q0D2K2 578 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 TEKT1Q969V4 418 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 ARHGEF10LQ9HCE6 1279 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 MTX1Q13505 466 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 PPP1R2P3Q6NXS1 205 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 TRIM4Q9C037 500 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 KIAA1468Q9P260 1216 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 CTTNBP2NLQ9P2B4 639 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 H0YCG3 227 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 KDRP35968 1356 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 CEP104O60308 925 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 ZNF274Q96GC6 653 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-201ENST00000302516 NCAPGQ9BPX3 1015 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 CAPN7Q9Y6W3 813 aa8.44□□□□□ -1.06
SF3B3-201ENST00000302516 ZMYM6O95789 1325 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 CCDC169A6NNP5 214 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 SH3BP5O60239 455 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 PPM1FP49593 454 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-201ENST00000302516 DNM2P50570 870 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 C16orf71Q8IYS4 520 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-201ENST00000302516 PLBD2Q8NHP8 589 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 HAUS4Q9H6D7 363 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 ATP10DQ9P241 1426 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 SND1Q7KZF4 910 aaKnown RBP eCLIP8.43□□□□□ -1.063e-7■□□□□ 10.9
SF3B3-201ENST00000302516 CDC37L1Q7L3B6 337 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 LRRC8AQ8IWT6 810 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 CCDC170Q8IYT3 715 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 CUEDC2Q9H467 287 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 PPP2R2CQ9Y2T4 447 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 KRT15P19012 456 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 MORC3Q14149 939 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 RBBP5Q15291 538 aaKnown RBP8.43□□□□□ -1.06
SF3B3-201ENST00000302516 OR8K1Q8NGG5 319 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 TESK2Q96S53 571 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 DRC3Q9H069 523 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 PFDN4Q9NQP4 134 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 PREX2Q70Z35 1606 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 QRICH2Q9H0J4 1663 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 MBD4O95243 580 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 LETM2Q2VYF4 491 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 KBTBD3Q8NAB2 608 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 XPO4Q9C0E2 1151 aaKnown RBP8.43□□□□□ -1.06
SF3B3-201ENST00000302516 RIC8AQ9NPQ8 531 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 POLKQ9UBT6 870 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 SOS2Q07890 1332 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-201ENST00000302516 PARP10Q53GL7 1025 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 SUDS3Q9H7L9 328 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-201ENST00000302516 MED23Q9ULK4 1368 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 LMNB2Q03252 620 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 KRT12Q99456 494 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 PASKQ96RG2 1323 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 PCP11498 1178 aaKnown RBP8.43□□□□□ -1.06
SF3B3-201ENST00000302516 PIK3AP1Q6ZUJ8 805 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 HOOK2Q96ED9 719 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 DNM3Q9UQ16 869 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 ABCC4O15439 1325 aa8.43□□□□□ -1.06
SF3B3-201ENST00000302516 LAD1O00515 517 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 IRS4O14654 1257 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 THAP12O43422 761 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 TBC1D8O95759 1140 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 LRCH2Q5VUJ6 765 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 PRDM15P57071 1507 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 ARHGEF35A5YM69 484 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 EYA2O00167 538 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms