RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 ARHGAP45Q92619 1136 aa8□□□□□ -1.13
ITGB1-201ENST00000302278 LBHD1Q9BQE6 289 aaPredicted RBP8□□□□□ -1.13
ITGB1-201ENST00000302278 UQCRFS1P1P0C7P4 283 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 SLFN5Q08AF3 891 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.99□□□□□ -1.13
ITGB1-201ENST00000302278 FAM196BA6NMK8 535 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 STRNO43815 780 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 MCAMP43121 646 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 USP14P54578 494 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 NKX3-2P78367 333 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 TJAP1Q5JTD0 557 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 AKNAD1Q5T1N1 836 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 ARRDC4Q8NCT1 418 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 NPLOC4Q8TAT6 608 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.99□□□□□ -1.13
ITGB1-201ENST00000302278 TNFRSF10AO00220 468 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 SEPT4O43236 478 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 TEX11Q8IYF3 940 aa7.99□□□□□ -1.13
ITGB1-201ENST00000302278 ANKRD33Q7Z3H0 272 aa7.98□□□□□ -1.13
ITGB1-201ENST00000302278 TANC1Q9C0D5 1861 aa7.98□□□□□ -1.13
ITGB1-201ENST00000302278 TRIM43BA6NCK2 446 aa7.98□□□□□ -1.13
ITGB1-201ENST00000302278 SPDYE16A6NNV3 312 aaPredicted RBP7.98□□□□□ -1.13
ITGB1-201ENST00000302278 BAG3O95817 575 aa7.98□□□□□ -1.13
ITGB1-201ENST00000302278 TFCP2Q12800 502 aa7.98□□□□□ -1.13
ITGB1-201ENST00000302278 C9orf50Q5SZB4 431 aa7.98□□□□□ -1.13
ITGB1-201ENST00000302278 ATXN2LQ8WWM7 1075 aaKnown RBP7.98□□□□□ -1.13
ITGB1-201ENST00000302278 TRIM43Q96BQ3 446 aaPredicted RBP7.98□□□□□ -1.13
ITGB1-201ENST00000302278 TOX2Q96NM4 488 aa7.98□□□□□ -1.13
ITGB1-201ENST00000302278 SENP6Q9GZR1 1112 aaPredicted RBP7.98□□□□□ -1.13
ITGB1-201ENST00000302278 BTBD7Q9P203 1132 aa7.98□□□□□ -1.13
ITGB1-201ENST00000302278 TIMM10P62072 90 aa7.98□□□□□ -1.13
ITGB1-201ENST00000302278 MRS2Q9HD23 443 aa7.98□□□□□ -1.13
ITGB1-201ENST00000302278 ABCF2Q9UG63 623 aa7.98□□□□□ -1.13
ITGB1-201ENST00000302278 PA2G4Q9UQ80 394 aaKnown RBP7.98□□□□□ -1.13
ITGB1-201ENST00000302278 PLA2G5P39877 138 aa7.97□□□□□ -1.13
ITGB1-201ENST00000302278 ADGRA1Q86SQ6 560 aa7.97□□□□□ -1.13
ITGB1-201ENST00000302278 TSEN34Q9BSV6 310 aaKnown RBP7.97□□□□□ -1.13
ITGB1-201ENST00000302278 API5Q9BZZ5 524 aaKnown RBP7.97□□□□□ -1.13
ITGB1-201ENST00000302278 SIL1Q9H173 461 aa7.97□□□□□ -1.13
ITGB1-201ENST00000302278 ADAMTS5Q9UNA0 930 aa7.97□□□□□ -1.13
ITGB1-201ENST00000302278 DIS3Q9Y2L1 958 aaKnown RBP7.97□□□□□ -1.13
ITGB1-201ENST00000302278 VCAM1P19320 739 aa7.97□□□□□ -1.13
ITGB1-201ENST00000302278 GUCY1A2P33402 732 aa7.97□□□□□ -1.13
ITGB1-201ENST00000302278 GABPAQ06546 454 aa7.97□□□□□ -1.13
ITGB1-201ENST00000302278 MB21D1Q8N884 522 aa7.97□□□□□ -1.13
ITGB1-201ENST00000302278 COL4A4P53420 1690 aaPredicted RBP7.97□□□□□ -1.13
ITGB1-201ENST00000302278 ATF7IPQ6VMQ6 1270 aa7.97□□□□□ -1.13
ITGB1-201ENST00000302278 MYLIPQ8WY64 445 aa7.97□□□□□ -1.13
ITGB1-201ENST00000302278 EYSQ5T1H1 3165 aa7.96□□□□□ -1.13
ITGB1-201ENST00000302278 PEX10O60683 326 aa7.96□□□□□ -1.13
ITGB1-201ENST00000302278 POLA2Q14181 598 aa7.96□□□□□ -1.13
ITGB1-201ENST00000302278 SHROOM1Q2M3G4 852 aaPredicted RBP7.96□□□□□ -1.13
ITGB1-201ENST00000302278 BADQ92934 168 aa7.96□□□□□ -1.13
ITGB1-201ENST00000302278 PRKAG2Q9UGJ0 569 aa7.96□□□□□ -1.13
ITGB1-201ENST00000302278 KBTBD13C9JR72 458 aa7.96□□□□□ -1.14
ITGB1-201ENST00000302278 FOSL2P15408 326 aa7.96□□□□□ -1.14
ITGB1-201ENST00000302278 LRRC41Q15345 812 aa7.96□□□□□ -1.14
ITGB1-201ENST00000302278 TRIM60Q495X7 471 aa7.96□□□□□ -1.14
ITGB1-201ENST00000302278 MSL3Q8N5Y2 521 aaKnown RBP7.96□□□□□ -1.14
ITGB1-201ENST00000302278 MROH8Q9H579 483 aa7.96□□□□□ -1.14
ITGB1-201ENST00000302278 DNAH12Q6ZR08 3092 aa7.96□□□□□ -1.14
ITGB1-201ENST00000302278 GNAI3P08754 354 aa7.96□□□□□ -1.14
ITGB1-201ENST00000302278 CST5P28325 142 aaPredicted RBP7.96□□□□□ -1.14
ITGB1-201ENST00000302278 ATP2B2Q01814 1243 aa7.96□□□□□ -1.14
ITGB1-201ENST00000302278 CCSAPQ6IQ19 270 aaPredicted RBP7.96□□□□□ -1.14
ITGB1-201ENST00000302278 LCTP09848 1927 aa7.96□□□□□ -1.14
ITGB1-201ENST00000302278 CYP2E1P05181 493 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-201ENST00000302278 HLA-DOAP06340 250 aa7.95□□□□□ -1.14
ITGB1-201ENST00000302278 CLTBP09497 229 aa7.95□□□□□ -1.14
ITGB1-201ENST00000302278 ITGB8P26012 769 aa7.95□□□□□ -1.14
ITGB1-201ENST00000302278 PI16Q6UXB8 463 aa7.95□□□□□ -1.14
ITGB1-201ENST00000302278 COL9A1P20849 921 aa7.95□□□□□ -1.14
ITGB1-201ENST00000302278 HOXD11P31277 338 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-201ENST00000302278 SHMT1P34896 483 aa7.95□□□□□ -1.14
ITGB1-201ENST00000302278 NAA16Q6N069 864 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-201ENST00000302278 MEIS3Q99687 375 aa7.95□□□□□ -1.14
ITGB1-201ENST00000302278 TACC3Q9Y6A5 838 aa7.95□□□□□ -1.14
ITGB1-201ENST00000302278 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-201ENST00000302278 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-201ENST00000302278 POU3F3P20264 500 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-201ENST00000302278 EPHB4P54760 987 aa7.95□□□□□ -1.14
ITGB1-201ENST00000302278 SH3RF1Q7Z6J0 888 aa7.95□□□□□ -1.14
ITGB1-201ENST00000302278 KLHDC9Q8NEP7 349 aa7.95□□□□□ -1.14
ITGB1-201ENST00000302278 MAML3Q96JK9 1138 aa7.95□□□□□ -1.14
ITGB1-201ENST00000302278 NOL10Q9BSC4 688 aaKnown RBP7.95□□□□□ -1.14
ITGB1-201ENST00000302278 MOV10L1Q9BXT6 1211 aaKnown RBP7.95□□□□□ -1.14
ITGB1-201ENST00000302278 CUL9Q8IWT3 2517 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 PTPRSQ13332 1948 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 COBLO75128 1261 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 ADAMTS4O75173 837 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 GDF11O95390 407 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 ADORA2AP29274 412 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 TBC1D9Q6ZT07 1266 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 USP38Q8NB14 1042 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 TGFBRAP1Q8WUH2 860 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 AATFQ9NY61 560 aaKnown RBP eCLIP7.94□□□□□ -1.142e-7■□□□□ 10.9
ITGB1-201ENST00000302278 SLC5A4Q9NY91 659 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 TBX21Q9UL17 535 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 GH2P01242 217 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 CDK7P50613 346 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms