RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 GOLGA6L9A6NEM1 432 aa27.49■■□□□ 1.99
FOXA3-201ENST00000302177 DDAH1O94760 285 aa27.49■■□□□ 1.99
FOXA3-201ENST00000302177 DMTNQ08495 405 aa27.49■■□□□ 1.99
FOXA3-201ENST00000302177 IFIT1BQ5T764 474 aaKnown RBP27.49■■□□□ 1.99
FOXA3-201ENST00000302177 HOMER1Q86YM7 354 aa27.49■■□□□ 1.99
FOXA3-201ENST00000302177 INTS13Q9NVM9 706 aa27.49■■□□□ 1.99
FOXA3-201ENST00000302177 DUOX1Q9NRD9 1551 aa27.49■■□□□ 1.99
FOXA3-201ENST00000302177 PDS5AQ29RF7 1337 aaKnown RBP27.49■■□□□ 1.99
FOXA3-201ENST00000302177 SPDYE4A6NLX3 237 aa27.49■■□□□ 1.99
FOXA3-201ENST00000302177 STX10O60499 249 aa27.49■■□□□ 1.99
FOXA3-201ENST00000302177 PLCD1P51178 756 aa27.49■■□□□ 1.99
FOXA3-201ENST00000302177 SRRTQ9BXP5 876 aaKnown RBP27.49■■□□□ 1.99
FOXA3-201ENST00000302177 TMEM232C9JQI7 657 aa27.48■■□□□ 1.99
FOXA3-201ENST00000302177 PRR29P0C7W0 189 aa27.48■■□□□ 1.99
FOXA3-201ENST00000302177 CDK11BP21127 795 aaKnown RBP27.48■■□□□ 1.99
FOXA3-201ENST00000302177 GYG1P46976 350 aa27.48■■□□□ 1.99
FOXA3-201ENST00000302177 SPECC1LQ69YQ0 1117 aa27.48■■□□□ 1.99
FOXA3-201ENST00000302177 TMEM139Q8IV31 216 aa27.48■■□□□ 1.99
FOXA3-201ENST00000302177 BCL11BQ9C0K0 894 aaPredicted RBP27.48■■□□□ 1.99
FOXA3-201ENST00000302177 BRMS1Q9HCU9 246 aa27.48■■□□□ 1.99
FOXA3-201ENST00000302177 CACNA1SQ13698 1873 aa27.48■■□□□ 1.99
FOXA3-201ENST00000302177 TROAPQ12815 778 aa27.48■■□□□ 1.99
FOXA3-201ENST00000302177 SH3RF1Q7Z6J0 888 aa27.48■■□□□ 1.99
FOXA3-201ENST00000302177 REXO1L1PQ8IX06 675 aa27.48■■□□□ 1.99
FOXA3-201ENST00000302177 MARCH10Q8NA82 808 aaPredicted RBP27.48■■□□□ 1.99
FOXA3-201ENST00000302177 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.48■■□□□ 1.99
FOXA3-201ENST00000302177 SLFN14P0C7P3 912 aa27.47■■□□□ 1.99
FOXA3-201ENST00000302177 FMR1Q06787 632 aaKnown RBP eCLIP27.47■■□□□ 1.99
FOXA3-201ENST00000302177 TRIM65Q6PJ69 517 aa27.47■■□□□ 1.99
FOXA3-201ENST00000302177 MYH14Q7Z406 1995 aaKnown RBP27.46■■□□□ 1.99
FOXA3-201ENST00000302177 KMT5BQ4FZB7 885 aa27.46■■□□□ 1.99
FOXA3-201ENST00000302177 SLC10A5Q5PT55 438 aa27.46■■□□□ 1.99
FOXA3-201ENST00000302177 MINPP1Q9UNW1 487 aa27.46■■□□□ 1.99
FOXA3-201ENST00000302177 ZBTB22O15209 634 aa27.46■■□□□ 1.99
FOXA3-201ENST00000302177 ORC4O43929 436 aa27.46■■□□□ 1.99
FOXA3-201ENST00000302177 SHISA4Q96DD7 197 aa27.46■■□□□ 1.99
FOXA3-201ENST00000302177 ACSBG1Q96GR2 724 aa27.46■■□□□ 1.99
FOXA3-201ENST00000302177 FAM84BQ96KN1 310 aaPredicted RBP27.46■■□□□ 1.99
FOXA3-201ENST00000302177 VPS54Q9P1Q0 977 aa27.46■■□□□ 1.99
FOXA3-201ENST00000302177 IQSEC3Q9UPP2 1182 aaPredicted RBP27.46■■□□□ 1.99
FOXA3-201ENST00000302177 COL1A1P02452 1464 aaPredicted RBP27.46■■□□□ 1.99
FOXA3-201ENST00000302177 NR1I3Q14994 352 aa27.45■■□□□ 1.98
FOXA3-201ENST00000302177 KRT27Q7Z3Y8 459 aa27.45■■□□□ 1.98
FOXA3-201ENST00000302177 FBXO33Q7Z6M2 555 aa27.45■■□□□ 1.98
FOXA3-201ENST00000302177 BAG1Q99933 345 aaPredicted RBP27.45■■□□□ 1.98
FOXA3-201ENST00000302177 V9GY48 417 aaPredicted RBP27.45■■□□□ 1.98
FOXA3-201ENST00000302177 SOCS7O14512 581 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 NT5C2P49902 561 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 ELF2Q15723 593 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 CTR9Q6PD62 1173 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 TNFRSF25Q93038 417 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 GSDMAQ96QA5 445 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 PRDM4Q9UKN5 801 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 A0A1B0GUL6 1792 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 DLEC1Q9Y238 1755 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 ZNF831Q5JPB2 1677 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 MYH6P13533 1939 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 ERFEQ4G0M1 354 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 TMTC3Q6ZXV5 915 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 USP49Q70CQ1 688 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 PDILTQ8N807 584 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.44■■□□□ 1.98
FOXA3-201ENST00000302177 BRWD3Q6RI45 1802 aa27.44■■□□□ 1.98
FOXA3-201ENST00000302177 ATP2B1P20020 1258 aa27.43■■□□□ 1.98
FOXA3-201ENST00000302177 PYM1Q9BRP8 204 aaKnown RBP27.43■■□□□ 1.98
FOXA3-201ENST00000302177 FAM53CQ9NYF3 392 aa27.43■■□□□ 1.98
FOXA3-201ENST00000302177 DNAI1Q9UI46 699 aa27.43■■□□□ 1.98
FOXA3-201ENST00000302177 PPP2R2CQ9Y2T4 447 aa27.43■■□□□ 1.98
FOXA3-201ENST00000302177 A0A1B0GTH6 734 aa27.42■■□□□ 1.98
FOXA3-201ENST00000302177 TRAPPC10P48553 1259 aa27.42■■□□□ 1.98
FOXA3-201ENST00000302177 DYNLL1P63167 89 aaKnown RBP27.42■■□□□ 1.98
FOXA3-201ENST00000302177 SPATA1Q5VX52 437 aa27.42■■□□□ 1.98
FOXA3-201ENST00000302177 TC2NQ8N9U0 490 aa27.42■■□□□ 1.98
FOXA3-201ENST00000302177 MED15Q96RN5 788 aa27.42■■□□□ 1.98
FOXA3-201ENST00000302177 COL4A1P02462 1669 aa27.42■■□□□ 1.98
FOXA3-201ENST00000302177 THSD7AQ9UPZ6 1657 aa27.42■■□□□ 1.98
FOXA3-201ENST00000302177 IGSF3O75054 1194 aa27.41■■□□□ 1.98
FOXA3-201ENST00000302177 FBXO38Q6PIJ6 1188 aa27.41■■□□□ 1.98
FOXA3-201ENST00000302177 PAGE5Q96GU1 130 aa27.41■■□□□ 1.98
FOXA3-201ENST00000302177 ATP8A2Q9NTI2 1148 aa27.41■■□□□ 1.98
FOXA3-201ENST00000302177 SCN7AQ01118 1682 aa27.41■■□□□ 1.98
FOXA3-201ENST00000302177 PLEKHA8P1O95397 391 aa27.4■■□□□ 1.98
FOXA3-201ENST00000302177 H2AFXP16104 143 aaPredicted RBP27.4■■□□□ 1.98
FOXA3-201ENST00000302177 GRAMD1CQ8IYS0 662 aa27.4■■□□□ 1.98
FOXA3-201ENST00000302177 ZNF384Q8TF68 577 aa27.4■■□□□ 1.98
FOXA3-201ENST00000302177 DHX58Q96C10 678 aa27.4■■□□□ 1.98
FOXA3-201ENST00000302177 NSUN4Q96CB9 384 aaKnown RBP27.4■■□□□ 1.98
FOXA3-201ENST00000302177 PRDM10Q9NQV6 1147 aa27.4■■□□□ 1.98
FOXA3-201ENST00000302177 COL5A3P25940 1745 aaPredicted RBP27.4■■□□□ 1.98
FOXA3-201ENST00000302177 SBK1Q52WX2 424 aa27.4■■□□□ 1.98
FOXA3-201ENST00000302177 CTCFLQ8NI51 663 aaPredicted RBP27.4■■□□□ 1.98
FOXA3-201ENST00000302177 CTAGE1Q96RT6 745 aa27.4■■□□□ 1.98
FOXA3-201ENST00000302177 SAMSN1Q9NSI8 373 aaKnown RBP27.4■■□□□ 1.98
FOXA3-201ENST00000302177 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.4■■□□□ 1.98
FOXA3-201ENST00000302177 V9GYY5 206 aaPredicted RBP27.4■■□□□ 1.98
FOXA3-201ENST00000302177 USP17L12C9JPN9 530 aa27.39■■□□□ 1.98
FOXA3-201ENST00000302177 USP17L21D6R901 530 aa27.39■■□□□ 1.98
FOXA3-201ENST00000302177 ATP2C1P98194 919 aaPredicted RBP27.39■■□□□ 1.98
FOXA3-201ENST00000302177 GABPB1Q06547 395 aaPredicted RBP27.39■■□□□ 1.98
FOXA3-201ENST00000302177 DPYDQ12882 1025 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms