RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 NASPP49321 788 aaPredicted RBP25.8■■□□□ 1.72
SMAD1-201ENST00000302085 AKAP17AQ02040 695 aaKnown RBP25.8■■□□□ 1.72
SMAD1-201ENST00000302085 PNMA1Q8ND90 353 aa25.8■■□□□ 1.72
SMAD1-201ENST00000302085 SHISA4Q96DD7 197 aa25.8■■□□□ 1.72
SMAD1-201ENST00000302085 hCG_1642624A0A1W2PR95 340 aa25.8■■□□□ 1.72
SMAD1-201ENST00000302085 BICD2Q8TD16 824 aa25.8■■□□□ 1.72
SMAD1-201ENST00000302085 PSMD1Q99460 953 aa25.8■■□□□ 1.72
SMAD1-201ENST00000302085 OSBPL5Q9H0X9 879 aaPredicted RBP25.8■■□□□ 1.72
SMAD1-201ENST00000302085 NFIAQ12857 509 aa25.79■■□□□ 1.72
SMAD1-201ENST00000302085 GNL2Q13823 731 aaKnown RBP25.79■■□□□ 1.72
SMAD1-201ENST00000302085 MAP3K14Q99558 947 aa25.79■■□□□ 1.72
SMAD1-201ENST00000302085 TMEM47Q9BQJ4 181 aa25.79■■□□□ 1.72
SMAD1-201ENST00000302085 DACT1Q9NYF0 836 aa25.79■■□□□ 1.72
SMAD1-201ENST00000302085 ATF5Q9Y2D1 282 aaPredicted RBP25.79■■□□□ 1.72
SMAD1-201ENST00000302085 CNTNAP5Q8WYK1 1306 aa25.79■■□□□ 1.72
SMAD1-201ENST00000302085 KIF13BQ9NQT8 1826 aa25.78■■□□□ 1.72
SMAD1-201ENST00000302085 BTBD18B2RXH4 712 aa25.78■■□□□ 1.72
SMAD1-201ENST00000302085 YEATS4O95619 227 aa25.78■■□□□ 1.72
SMAD1-201ENST00000302085 ANO1Q5XXA6 986 aa25.78■■□□□ 1.72
SMAD1-201ENST00000302085 TSPY26PQ9H489 355 aa25.78■■□□□ 1.72
SMAD1-201ENST00000302085 STK38Q15208 465 aa25.78■■□□□ 1.72
SMAD1-201ENST00000302085 DIS3L2Q8IYB7 885 aaKnown RBP25.78■■□□□ 1.72
SMAD1-201ENST00000302085 PCDHA7Q9UN72 937 aa25.78■■□□□ 1.72
SMAD1-201ENST00000302085 KIF5BP33176 963 aa25.77■■□□□ 1.72
SMAD1-201ENST00000302085 ME1P48163 572 aa25.77■■□□□ 1.72
SMAD1-201ENST00000302085 GRM4Q14833 912 aa25.77■■□□□ 1.72
SMAD1-201ENST00000302085 SAFBQ15424 915 aaKnown RBP eCLIP25.77■■□□□ 1.72
SMAD1-201ENST00000302085 ZFPM1Q8IX07 1006 aa25.77■■□□□ 1.72
SMAD1-201ENST00000302085 SERPINA10Q9UK55 444 aa25.77■■□□□ 1.72
SMAD1-201ENST00000302085 MYH6P13533 1939 aa25.77■■□□□ 1.72
SMAD1-201ENST00000302085 NR1I2O75469 434 aa25.76■■□□□ 1.72
SMAD1-201ENST00000302085 RBM5P52756 815 aaKnown RBP eCLIP25.76■■□□□ 1.72
SMAD1-201ENST00000302085 CCAR1Q8IX12 1150 aaKnown RBP25.76■■□□□ 1.72
SMAD1-201ENST00000302085 ZNF277Q9NRM2 450 aaPredicted RBP25.76■■□□□ 1.72
SMAD1-201ENST00000302085 STX8Q9UNK0 236 aa25.76■■□□□ 1.72
SMAD1-201ENST00000302085 NOSTRINQ8IVI9 506 aa25.76■■□□□ 1.71
SMAD1-201ENST00000302085 FOXP1Q9H334 677 aaPredicted RBP25.76■■□□□ 1.71
SMAD1-201ENST00000302085 VPS54Q9P1Q0 977 aa25.76■■□□□ 1.71
SMAD1-201ENST00000302085 SPTLC2O15270 562 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 NOVP48745 357 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 CACNB3P54284 484 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 TGFB2P61812 414 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 STAG2Q8N3U4 1231 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 KCNG4Q8TDN1 519 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 GOLPH3LQ9H4A5 285 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 MAD2L2Q9UI95 211 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 OXER1Q8TDS5 423 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 CEP95Q96GE4 821 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 PHF20Q9BVI0 1012 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 NUP62CLQ9H1M0 184 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 DDX19AQ9NUU7 478 aaKnown RBP25.75■■□□□ 1.71
SMAD1-201ENST00000302085 SERPINB13Q9UIV8 391 aa25.75■■□□□ 1.71
SMAD1-201ENST00000302085 SLC39A14Q15043 492 aa25.74■■□□□ 1.71
SMAD1-201ENST00000302085 SF3A1Q15459 793 aaKnown RBP25.74■■□□□ 1.71
SMAD1-201ENST00000302085 KLHL34Q8N239 644 aa25.74■■□□□ 1.71
SMAD1-201ENST00000302085 IDI2Q9BXS1 227 aa25.74■■□□□ 1.71
SMAD1-201ENST00000302085 CLSTN2Q9H4D0 955 aa25.74■■□□□ 1.71
SMAD1-201ENST00000302085 PIM2Q9P1W9 311 aa25.74■■□□□ 1.71
SMAD1-201ENST00000302085 CAMK4Q16566 473 aa25.73■■□□□ 1.71
SMAD1-201ENST00000302085 ADALQ6DHV7 355 aa25.73■■□□□ 1.71
SMAD1-201ENST00000302085 LARGE2Q8N3Y3 721 aa25.73■■□□□ 1.71
SMAD1-201ENST00000302085 FUCA2Q9BTY2 467 aa25.73■■□□□ 1.71
SMAD1-201ENST00000302085 MTFR1LQ9H019 292 aa25.73■■□□□ 1.71
SMAD1-201ENST00000302085 FAM198AQ9UFP1 575 aa25.73■■□□□ 1.71
SMAD1-201ENST00000302085 SWAP70Q9UH65 585 aa25.73■■□□□ 1.71
SMAD1-201ENST00000302085 AKR1B1P15121 316 aa25.73■■□□□ 1.71
SMAD1-201ENST00000302085 XBP1P17861 261 aa25.73■■□□□ 1.71
SMAD1-201ENST00000302085 NR5A1Q13285 461 aa25.73■■□□□ 1.71
SMAD1-201ENST00000302085 PTPAQ15257 358 aa25.73■■□□□ 1.71
SMAD1-201ENST00000302085 COL4A5P29400 1685 aa25.72■■□□□ 1.71
SMAD1-201ENST00000302085 POLD1P28340 1107 aa25.72■■□□□ 1.71
SMAD1-201ENST00000302085 SHMT1P34896 483 aa25.72■■□□□ 1.71
SMAD1-201ENST00000302085 SLC35G1Q2M3R5 365 aa25.72■■□□□ 1.71
SMAD1-201ENST00000302085 PLIN4Q96Q06 1357 aa25.72■■□□□ 1.71
SMAD1-201ENST00000302085 A0A1W2PQ27 194 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 A0A1W2PQ64 194 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 A0A1W2PQD8 194 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 PALM3A6NDB9 673 aaPredicted RBP25.71■■□□□ 1.71
SMAD1-201ENST00000302085 HLA-DOAP06340 250 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 TOP1P11387 765 aaKnown RBP25.71■■□□□ 1.71
SMAD1-201ENST00000302085 VEGFAP15692 232 aaPredicted RBP25.71■■□□□ 1.71
SMAD1-201ENST00000302085 GNAQP50148 359 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 TOB1P50616 345 aaPredicted RBP25.71■■□□□ 1.71
SMAD1-201ENST00000302085 CFAP100Q494V2 611 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 ENGASEQ8NFI3 743 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 IGKV6D-41A0A0C4DH26 115 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 RAD17O75943 681 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 SCG2P13521 617 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 TCP10Q12799 353 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 SNW1Q13573 536 aaKnown RBP25.71■■□□□ 1.71
SMAD1-201ENST00000302085 PFKFB3Q16875 520 aaPredicted RBP25.71■■□□□ 1.71
SMAD1-201ENST00000302085 RSBN1LQ6PCB5 846 aaPredicted RBP25.71■■□□□ 1.71
SMAD1-201ENST00000302085 FSIP1Q8NA03 581 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 PIBF1Q8WXW3 757 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 VPS33BQ9H267 617 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 MTMR7Q9Y216 660 aa25.71■■□□□ 1.71
SMAD1-201ENST00000302085 BAZ2BQ9UIF8 2168 aaKnown RBP25.7■■□□□ 1.71
SMAD1-201ENST00000302085 NPM3O75607 178 aaKnown RBP25.7■■□□□ 1.7
SMAD1-201ENST00000302085 VIL1P09327 827 aaKnown RBP25.7■■□□□ 1.7
SMAD1-201ENST00000302085 SLURP2P0DP57 97 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms