RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 SWT1Q5T5J6 900 aaKnown RBP12.38□□□□□ -0.43
SNX20-201ENST00000300590 SH2D3CQ8N5H7 860 aa12.38□□□□□ -0.43
SNX20-201ENST00000300590 IP6K1Q92551 441 aa12.38□□□□□ -0.43
SNX20-201ENST00000300590 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.38□□□□□ -0.43
SNX20-201ENST00000300590 ZNF330Q9Y3S2 320 aaPredicted RBP12.38□□□□□ -0.43
SNX20-201ENST00000300590 MYH15Q9Y2K3 1946 aa12.38□□□□□ -0.43
SNX20-201ENST00000300590 SSBP05455 408 aaKnown RBP eCLIP12.37□□□□□ -0.43
SNX20-201ENST00000300590 ZAP70P43403 619 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 TUBB4BP68371 445 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 UBXN1Q04323 297 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 SSRP1Q08945 709 aaKnown RBP12.37□□□□□ -0.43
SNX20-201ENST00000300590 TMEM67Q5HYA8 995 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 RRAGBQ5VZM2 374 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 ATG9AQ7Z3C6 839 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 HDAC7Q8WUI4 952 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 JAKMIP2Q96AA8 810 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 RUFY1Q96T51 708 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 ZMYM6O95789 1325 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 TUBBP07437 444 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 USP8P40818 1118 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 AARSP49588 968 aaKnown RBP eCLIP12.37□□□□□ -0.43
SNX20-201ENST00000300590 SARSP49591 514 aaKnown RBP12.37□□□□□ -0.43
SNX20-201ENST00000300590 KRT31Q15323 416 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 GIMAP7Q8NHV1 300 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 OXER1Q8TDS5 423 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 NUP133Q8WUM0 1156 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 ZNF496Q96IT1 587 aaPredicted RBP12.37□□□□□ -0.43
SNX20-201ENST00000300590 FBXO2Q9UK22 296 aaPredicted RBP12.37□□□□□ -0.43
SNX20-201ENST00000300590 DUSP10Q9Y6W6 482 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 UBN2Q6ZU65 1347 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 NDUFA10O95299 355 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 ZNF790Q6PG37 636 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 TBC1D10CQ8IV04 446 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 ARL8AQ96BM9 186 aa12.37□□□□□ -0.43
SNX20-201ENST00000300590 A0A087X0B3 334 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 PDE2AO00408 941 aaPredicted RBP12.36□□□□□ -0.43
SNX20-201ENST00000300590 PTPREP23469 700 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 ERCC5P28715 1186 aaPredicted RBP12.36□□□□□ -0.43
SNX20-201ENST00000300590 RDXP35241 583 aaKnown RBP12.36□□□□□ -0.43
SNX20-201ENST00000300590 DPYDQ12882 1025 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 PPFIA1Q13136 1202 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 TSR1Q2NL82 804 aaKnown RBP12.36□□□□□ -0.43
SNX20-201ENST00000300590 MSL3Q8N5Y2 521 aaKnown RBP12.36□□□□□ -0.43
SNX20-201ENST00000300590 VIPAS39Q9H9C1 493 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 SMARCAL1Q9NZC9 954 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 CEP126Q9P2H0 1117 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 ACTN4O43707 911 aaKnown RBP12.36□□□□□ -0.43
SNX20-201ENST00000300590 DNA2P51530 1060 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 CYP27A1Q02318 531 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 ACTN3Q08043 901 aaPredicted RBP12.36□□□□□ -0.43
SNX20-201ENST00000300590 CCNI2Q6ZMN8 369 aaPredicted RBP12.36□□□□□ -0.43
SNX20-201ENST00000300590 CTAGE1Q96RT6 745 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 LAMA4Q16363 1823 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 IFIT3O14879 490 aaKnown RBP12.36□□□□□ -0.43
SNX20-201ENST00000300590 IDH1O75874 414 aaKnown RBP12.36□□□□□ -0.43
SNX20-201ENST00000300590 CXCR5P32302 372 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 TRAPPC11Q7Z392 1133 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 REXO2Q9Y3B8 237 aaKnown RBP12.36□□□□□ -0.43
SNX20-201ENST00000300590 SLC12A7Q9Y666 1083 aa12.36□□□□□ -0.43
SNX20-201ENST00000300590 ANKARQ7Z5J8 1434 aa12.35□□□□□ -0.43
SNX20-201ENST00000300590 EIF3HO15372 352 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNX20-201ENST00000300590 IDEP14735 1019 aa12.35□□□□□ -0.43
SNX20-201ENST00000300590 SCP2P22307 547 aa12.35□□□□□ -0.43
SNX20-201ENST00000300590 GSCP56915 257 aaPredicted RBP12.35□□□□□ -0.43
SNX20-201ENST00000300590 PPP2R5AQ15172 486 aa12.35□□□□□ -0.43
SNX20-201ENST00000300590 CEP57Q86XR8 500 aa12.35□□□□□ -0.43
SNX20-201ENST00000300590 DMGDHQ9UI17 866 aaKnown RBP12.35□□□□□ -0.43
SNX20-201ENST00000300590 ZC3H4Q9UPT8 1303 aaKnown RBP12.35□□□□□ -0.43
SNX20-201ENST00000300590 FAM237AA0A1B0GTK4 181 aa12.35□□□□□ -0.43
SNX20-201ENST00000300590 FRMD3A2A2Y4 597 aa12.35□□□□□ -0.43
SNX20-201ENST00000300590 MCM3P25205 808 aa12.35□□□□□ -0.43
SNX20-201ENST00000300590 SMCR8Q8TEV9 937 aaPredicted RBP12.35□□□□□ -0.43
SNX20-201ENST00000300590 PCMTD1Q96MG8 357 aaPredicted RBP12.35□□□□□ -0.43
SNX20-201ENST00000300590 VPS54Q9P1Q0 977 aa12.35□□□□□ -0.43
SNX20-201ENST00000300590 TTC26A0AVF1 554 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 ATP2C2O75185 946 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 PBX1P40424 430 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 CABS1Q96KC9 395 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 LACRTQ9GZZ8 138 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 EHD2Q9NZN4 543 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 COPB1P53618 953 aaKnown RBP12.34□□□□□ -0.43
SNX20-201ENST00000300590 AMOTQ4VCS5 1084 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 NBPF14Q5TI25 921 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 POTEDQ86YR6 584 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 PAGE5Q96GU1 130 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 LRRC1Q9BTT6 524 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 ZBTB3Q9H5J0 574 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 SH2B2O14492 632 aaPredicted RBP12.34□□□□□ -0.43
SNX20-201ENST00000300590 KRT14P02533 472 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 IL15P40933 162 aaPredicted RBP12.34□□□□□ -0.43
SNX20-201ENST00000300590 CTDSPL2Q05D32 466 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 CCDC70Q6NSX1 233 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 TRIML1Q8N9V2 468 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 XAGE2Q96GT9 111 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 LRRC37A3O60309 1634 aa12.34□□□□□ -0.43
SNX20-201ENST00000300590 RFX7Q2KHR2 1363 aa12.33□□□□□ -0.43
SNX20-201ENST00000300590 EYA2O00167 538 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 ZPR1O75312 459 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms