RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 GPATCH3Q96I76 525 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 UNC93B1Q9H1C4 597 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 RBPJLQ9UBG7 517 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 MGAMO43451 1857 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 SLC34A2O95436 690 aa16.72■□□□□ 0.27
TMEM41B-201ENST00000299596 ZYXQ15942 572 aaKnown RBP16.72■□□□□ 0.27
TMEM41B-201ENST00000299596 SLFNL1Q499Z3 407 aa16.72■□□□□ 0.27
TMEM41B-201ENST00000299596 AMOTL1Q8IY63 956 aa16.72■□□□□ 0.27
TMEM41B-201ENST00000299596 U2AF1L4Q8WU68 220 aaKnown RBP16.72■□□□□ 0.27
TMEM41B-201ENST00000299596 TXNRD2Q9NNW7 524 aa16.72■□□□□ 0.27
TMEM41B-201ENST00000299596 MPHOSPH10O00566 681 aaKnown RBP16.71■□□□□ 0.27
TMEM41B-201ENST00000299596 PRKAB2O43741 272 aa16.71■□□□□ 0.27
TMEM41B-201ENST00000299596 SGPL1O95470 568 aa16.71■□□□□ 0.27
TMEM41B-201ENST00000299596 MAPK4P31152 587 aa16.71■□□□□ 0.27
TMEM41B-201ENST00000299596 GUCY1A2P33402 732 aa16.71■□□□□ 0.27
TMEM41B-201ENST00000299596 ERVK-9P63128 1117 aa16.71■□□□□ 0.27
TMEM41B-201ENST00000299596 ERVK-24P63145 666 aa16.71■□□□□ 0.27
TMEM41B-201ENST00000299596 SEPT2Q15019 361 aa16.71■□□□□ 0.27
TMEM41B-201ENST00000299596 CATSPERGQ6ZRH7 1159 aa16.71■□□□□ 0.27
TMEM41B-201ENST00000299596 CCAR1Q8IX12 1150 aaKnown RBP16.71■□□□□ 0.27
TMEM41B-201ENST00000299596 ACER1Q8TDN7 264 aa16.71■□□□□ 0.27
TMEM41B-201ENST00000299596 HMGCRP04035 888 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 CYP2D6P10635 497 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 VCAM1P19320 739 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 EVX2Q03828 476 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 Q3C1V9 767 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 C12orf60Q5U649 245 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 TMEM179Q6ZVK1 233 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 NUDT12Q9BQG2 462 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 RABGAP1Q9Y3P9 1069 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 CCNA1P78396 465 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 KBTBD3Q8NAB2 608 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 SOCS4Q8WXH5 440 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 DYNLL2Q96FJ2 89 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 CCDC17Q96LX7 622 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 PAGR1Q9BTK6 254 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 PUS7LQ9H0K6 701 aaKnown RBP16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 PAK6Q9NQU5 681 aaPredicted RBP16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 SLC4A4Q9Y6R1 1079 aa16.7■□□□□ 0.26
TMEM41B-201ENST00000299596 USP17L12C9JPN9 530 aa16.69■□□□□ 0.26
TMEM41B-201ENST00000299596 USP17L21D6R901 530 aa16.69■□□□□ 0.26
TMEM41B-201ENST00000299596 PEX10O60683 326 aa16.69■□□□□ 0.26
TMEM41B-201ENST00000299596 TFRCP02786 760 aaKnown RBP16.69■□□□□ 0.26
TMEM41B-201ENST00000299596 CHGBP05060 677 aa16.69■□□□□ 0.26
TMEM41B-201ENST00000299596 XRCC5P13010 732 aaKnown RBP16.69■□□□□ 0.26
TMEM41B-201ENST00000299596 LBX2Q6XYB7 198 aa16.69■□□□□ 0.26
TMEM41B-201ENST00000299596 UBE2Q1Q7Z7E8 422 aa16.69■□□□□ 0.26
TMEM41B-201ENST00000299596 SLC44A5Q8NCS7 719 aa16.69■□□□□ 0.26
TMEM41B-201ENST00000299596 DEFB118Q96PH6 123 aa16.69■□□□□ 0.26
TMEM41B-201ENST00000299596 PCDHB15Q9Y5E8 787 aa16.69■□□□□ 0.26
TMEM41B-201ENST00000299596 DDX60LQ5H9U9 1706 aaKnown RBP16.69■□□□□ 0.26
TMEM41B-201ENST00000299596 RRP1P56182 461 aaKnown RBP16.68■□□□□ 0.26
TMEM41B-201ENST00000299596 POTEEQ6S8J3 1075 aa16.68■□□□□ 0.26
TMEM41B-201ENST00000299596 PLEKHH3Q7Z736 793 aa16.68■□□□□ 0.26
TMEM41B-201ENST00000299596 TRMT44Q8IYL2 757 aaKnown RBP16.68■□□□□ 0.26
TMEM41B-201ENST00000299596 HTATIP2Q9BUP3 242 aa16.68■□□□□ 0.26
TMEM41B-201ENST00000299596 PORCNQ9H237 461 aa16.68■□□□□ 0.26
TMEM41B-201ENST00000299596 RPAP3Q9H6T3 665 aaPredicted RBP16.68■□□□□ 0.26
TMEM41B-201ENST00000299596 CWC22Q9HCG8 908 aaKnown RBP16.68■□□□□ 0.26
TMEM41B-201ENST00000299596 NAV1Q8NEY1 1877 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 A0A1W2PRG0 241 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 GLRX3O76003 335 aaKnown RBP16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 ZFYP08048 801 aaPredicted RBP16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 CYP2B6P20813 491 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 CDK8P49336 464 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 LRRFIP1Q32MZ4 808 aaKnown RBP16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 C16orf86Q6ZW13 317 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 GPR142Q7Z601 462 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 DPF3Q92784 378 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 STRBPQ96SI9 672 aaKnown RBP16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 CRISPLD2Q9H0B8 497 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.67■□□□□ 0.263e-6■■■■□ 25
TMEM41B-201ENST00000299596 SH2D4AQ9H788 454 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 ARHGEF10LQ9HCE6 1279 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 HMX1Q9NP08 348 aaPredicted RBP16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 HOXC10Q9NYD6 342 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 TTC41PQ6P2S7 1318 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 RPTORQ8N122 1335 aa16.67■□□□□ 0.26
TMEM41B-201ENST00000299596 CYP2D7A0A087X1C5 515 aa16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 ERC2O15083 957 aa16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 RNF113AO15541 343 aaKnown RBP16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 CNMDO75829 334 aa16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 FARP2O94887 1054 aaPredicted RBP16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 AKR1B1P15121 316 aa16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 RGS2P41220 211 aa16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 COG2Q14746 738 aa16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 MORN1Q5T089 497 aa16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 GIMAP6Q6P9H5 292 aa16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 CTR9Q6PD62 1173 aa16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 APPBP2Q92624 585 aa16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 LPAR1Q92633 364 aa16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 USP6NLQ92738 828 aa16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 ARPP21Q9UBL0 812 aaPredicted RBP16.66■□□□□ 0.26
TMEM41B-201ENST00000299596 SPDYE16A6NNV3 312 aaPredicted RBP16.65■□□□□ 0.26
TMEM41B-201ENST00000299596 ICA1Q05084 483 aa16.65■□□□□ 0.26
TMEM41B-201ENST00000299596 TSHZ3Q63HK5 1081 aa16.65■□□□□ 0.26
TMEM41B-201ENST00000299596 TRIB2Q92519 343 aa16.65■□□□□ 0.26
TMEM41B-201ENST00000299596 TMX2Q9Y320 296 aa16.65■□□□□ 0.26
TMEM41B-201ENST00000299596 SBK1Q52WX2 424 aa16.64■□□□□ 0.25
TMEM41B-201ENST00000299596 SIAH1Q8IUQ4 282 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms